EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000020956 (Gene tree)
Gene ID: 103040698
Gene Symbol: sall2
Alias: fc29e07|sb:cb763|si:ch211-10e2.7|wu:fc29e07
Full Name: sal-like protein 4
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 4767 bases
Position: chr16:6846488-6851254
Accession: 103040698
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000021577	zf-C2H2	PF00096.26	9.3e-18	1	2
ENSAMXP00000021577	zf-C2H2	PF00096.26	9.3e-18	2	2
ENSAMXP00000021577	zf-met	PF12874.7	9.1e-11	1	2
ENSAMXP00000021577	zf-met	PF12874.7	9.1e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000021577	-	3725	XM_007258038	ENSAMXP00000021577	1156 (aa)	XP_007258100	W5LP15

Gene Model

Click here to download ENSAMXG00000020956's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000020956's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000020956	sall2	64	80.645	ENSAMXG00000010979	si:ch211-212k18.5	60	80.645

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000020956	sall2	53	46.958	ENSAPOG00000013387	si:ch211-212k18.5	60	46.926	Acanthochromis_polyacanthus
ENSAMXG00000020956	sall2	92	44.908	ENSAPOG00000015347	sall2	87	45.253	Acanthochromis_polyacanthus
ENSAMXG00000020956	sall2	58	49.209	ENSACIG00000019922	si:ch211-212k18.5	67	50.142	Amphilophus_citrinellus
ENSAMXG00000020956	sall2	92	44.638	ENSAOCG00000016559	sall2	87	45.107	Amphiprion_ocellaris
ENSAMXG00000020956	sall2	57	52.785	ENSAPEG00000020215	sall2	90	52.741	Amphiprion_percula
ENSAMXG00000020956	sall2	97	43.858	ENSATEG00000007303	sall2	97	43.396	Anabas_testudineus
ENSAMXG00000020956	sall2	57	46.734	ENSATEG00000001254	si:ch211-212k18.5	71	48.212	Anabas_testudineus
ENSAMXG00000020956	sall2	61	60.870	ENSACLG00000009709	si:ch211-212k18.5	66	50.358	Astatotilapia_calliptera
ENSAMXG00000020956	sall2	92	43.934	ENSACLG00000019867	sall2	97	43.735	Astatotilapia_calliptera
ENSAMXG00000020956	sall2	64	48.252	ENSCSEG00000004426	si:ch211-212k18.5	61	48.459	Cynoglossus_semilaevis
ENSAMXG00000020956	sall2	65	47.375	ENSCSEG00000021148	sall2	65	46.797	Cynoglossus_semilaevis
ENSAMXG00000020956	sall2	58	48.201	ENSCVAG00000007475	si:ch211-212k18.5	54	48.502	Cyprinodon_variegatus
ENSAMXG00000020956	sall2	67	47.380	ENSCVAG00000006032	sall2	73	46.838	Cyprinodon_variegatus
ENSAMXG00000020956	sall2	51	60.784	ENSDARG00000103316	si:ch211-212k18.5	52	51.858	Danio_rerio
ENSAMXG00000020956	sall2	94	47.819	ENSDARG00000075116	sall2	67	55.344	Danio_rerio
ENSAMXG00000020956	sall2	58	55.785	ENSELUG00000004389	sall2	87	47.454	Esox_lucius
ENSAMXG00000020956	sall2	63	49.254	ENSELUG00000024534	si:ch211-212k18.5	57	49.254	Esox_lucius
ENSAMXG00000020956	sall2	61	60.000	ENSFHEG00000017264	si:ch211-212k18.5	69	48.006	Fundulus_heteroclitus
ENSAMXG00000020956	sall2	95	42.407	ENSFHEG00000017550	sall2	99	42.198	Fundulus_heteroclitus
ENSAMXG00000020956	sall2	99	42.824	ENSGAFG00000015194	sall2	72	47.892	Gambusia_affinis
ENSAMXG00000020956	sall2	57	49.057	ENSGAFG00000003746	si:ch211-212k18.5	54	49.857	Gambusia_affinis
ENSAMXG00000020956	sall2	61	60.870	ENSHBUG00000019672	si:ch211-212k18.5	66	50.644	Haplochromis_burtoni
ENSAMXG00000020956	sall2	92	43.852	ENSHBUG00000002882	sall2	87	43.658	Haplochromis_burtoni
ENSAMXG00000020956	sall2	90	41.432	ENSIPUG00000002559	sall2	82	42.793	Ictalurus_punctatus
ENSAMXG00000020956	sall2	73	56.075	ENSKMAG00000020172	sall2	80	56.075	Kryptolebias_marmoratus
ENSAMXG00000020956	sall2	58	48.936	ENSKMAG00000019657	si:ch211-212k18.5	54	49.501	Kryptolebias_marmoratus
ENSAMXG00000020956	sall2	58	48.864	ENSLBEG00000020887	si:ch211-212k18.5	60	49.498	Labrus_bergylta
ENSAMXG00000020956	sall2	58	47.708	ENSMAMG00000015887	si:ch211-212k18.5	76	48.117	Mastacembelus_armatus
ENSAMXG00000020956	sall2	97	44.925	ENSMAMG00000016229	sall2	96	44.811	Mastacembelus_armatus
ENSAMXG00000020956	sall2	61	60.870	ENSMZEG00005021214	si:ch211-212k18.5	66	50.358	Maylandia_zebra
ENSAMXG00000020956	sall2	92	43.934	ENSMZEG00005012103	sall2	87	43.735	Maylandia_zebra
ENSAMXG00000020956	sall2	64	47.932	ENSMMOG00000012726	si:ch211-212k18.5	67	48.511	Mola_mola
ENSAMXG00000020956	sall2	54	86.957	ENSMALG00000000979	si:ch211-212k18.5	61	46.889	Monopterus_albus
ENSAMXG00000020956	sall2	61	46.194	ENSNBRG00000017645	sall2	69	46.080	Neolamprologus_brichardi
ENSAMXG00000020956	sall2	63	49.564	ENSORLG00000030429	si:ch211-212k18.5	54	49.353	Oryzias_latipes
ENSAMXG00000020956	sall2	94	43.223	ENSORLG00000026871	sall2	98	42.801	Oryzias_latipes
ENSAMXG00000020956	sall2	57	49.273	ENSORLG00020008145	si:ch211-212k18.5	54	49.065	Oryzias_latipes_hni
ENSAMXG00000020956	sall2	94	43.221	ENSORLG00020007873	sall2	98	42.857	Oryzias_latipes_hni
ENSAMXG00000020956	sall2	94	43.011	ENSORLG00015002422	sall2	98	42.486	Oryzias_latipes_hsok
ENSAMXG00000020956	sall2	66	49.273	ENSORLG00015004982	si:ch211-212k18.5	61	49.333	Oryzias_latipes_hsok
ENSAMXG00000020956	sall2	58	48.629	ENSOMEG00000013949	si:ch211-212k18.5	80	41.527	Oryzias_melastigma
ENSAMXG00000020956	sall2	94	43.093	ENSOMEG00000012904	sall2	98	43.451	Oryzias_melastigma
ENSAMXG00000020956	sall2	57	47.750	ENSPMGG00000018714	si:ch211-212k18.5	59	49.275	Periophthalmus_magnuspinnatus
ENSAMXG00000020956	sall2	58	49.206	ENSPFOG00000023705	si:ch211-212k18.5	57	49.857	Poecilia_formosa
ENSAMXG00000020956	sall2	94	44.359	ENSPFOG00000016504	sall2	76	48.136	Poecilia_formosa
ENSAMXG00000020956	sall2	94	42.996	ENSPLAG00000018320	sall2	73	48.380	Poecilia_latipinna
ENSAMXG00000020956	sall2	58	48.196	ENSPLAG00000002577	si:ch211-212k18.5	54	48.927	Poecilia_latipinna
ENSAMXG00000020956	sall2	94	42.661	ENSPMEG00000006335	sall2	99	43.053	Poecilia_mexicana
ENSAMXG00000020956	sall2	58	49.206	ENSPMEG00000016395	si:ch211-212k18.5	57	49.857	Poecilia_mexicana
ENSAMXG00000020956	sall2	94	43.401	ENSPREG00000021908	sall2	73	48.913	Poecilia_reticulata
ENSAMXG00000020956	sall2	57	48.988	ENSPREG00000005292	si:ch211-212k18.5	54	48.857	Poecilia_reticulata
ENSAMXG00000020956	sall2	99	71.199	ENSPNAG00000021463	sall2	100	70.946	Pygocentrus_nattereri
ENSAMXG00000020956	sall2	50	60.000	ENSPNAG00000006123	si:ch211-212k18.5	60	60.000	Pygocentrus_nattereri
ENSAMXG00000020956	sall2	93	44.108	ENSSMAG00000014157	sall2	87	44.029	Scophthalmus_maximus
ENSAMXG00000020956	sall2	97	45.671	ENSSDUG00000012274	sall2	88	45.830	Seriola_dumerili
ENSAMXG00000020956	sall2	97	44.795	ENSSLDG00000001653	sall2	88	44.882	Seriola_lalandi_dorsalis
ENSAMXG00000020956	sall2	57	48.625	ENSSLDG00000003393	si:ch211-212k18.5	53	49.929	Seriola_lalandi_dorsalis
ENSAMXG00000020956	sall2	79	62.500	ENSSPAG00000013435	si:ch211-212k18.5	54	48.291	Stegastes_partitus
ENSAMXG00000020956	sall2	92	44.444	ENSSPAG00000023009	sall2	87	44.861	Stegastes_partitus
ENSAMXG00000020956	sall2	57	48.629	ENSTRUG00000025082	si:ch211-212k18.5	61	48.584	Takifugu_rubripes
ENSAMXG00000020956	sall2	97	41.956	ENSTRUG00000024556	sall2	97	41.795	Takifugu_rubripes
ENSAMXG00000020956	sall2	94	43.847	ENSXMAG00000000902	sall2	73	49.676	Xiphophorus_maculatus
ENSAMXG00000020956	sall2	57	49.133	ENSXMAG00000001461	si:ch211-212k18.5	54	49.429	Xiphophorus_maculatus