EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000021039 (Gene tree)
Gene ID: 103045574
Gene Symbol: utp20
Alias: im:7159098|wu:fb83c08
Full Name: UTP20%2C small subunit processome component
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 48595 bases
Position: chr7:7553556-7602150
Accession: 103045574
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000021661	DRIM	PF07539.12	2.1e-178	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000021662	-	8403	XM_007252722	ENSAMXP00000021661	2800 (aa)	XP_007252784	W5LP94

Gene Model

Click here to download ENSAMXG00000021039's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000021039's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000021039	utp20	99	56.551	ENSG00000120800	UTP20	100	56.303	Homo_sapiens
ENSAMXG00000021039	utp20	100	66.513	ENSAPOG00000002429	utp20	100	66.478	Acanthochromis_polyacanthus
ENSAMXG00000021039	utp20	99	56.643	ENSAMEG00000016416	UTP20	100	56.511	Ailuropoda_melanoleuca
ENSAMXG00000021039	utp20	100	65.909	ENSACIG00000007987	utp20	100	65.572	Amphilophus_citrinellus
ENSAMXG00000021039	utp20	60	66.254	ENSAOCG00000015055	utp20	96	66.372	Amphiprion_ocellaris
ENSAMXG00000021039	utp20	100	65.982	ENSAPEG00000011605	utp20	100	66.148	Amphiprion_percula
ENSAMXG00000021039	utp20	98	66.884	ENSATEG00000005601	utp20	100	67.269	Anabas_testudineus
ENSAMXG00000021039	utp20	99	57.260	ENSAPLG00000015651	UTP20	100	57.478	Anas_platyrhynchos
ENSAMXG00000021039	utp20	99	57.214	ENSACAG00000011671	UTP20	100	56.801	Anolis_carolinensis
ENSAMXG00000021039	utp20	99	55.051	ENSANAG00000027152	UTP20	100	54.619	Aotus_nancymaae
ENSAMXG00000021039	utp20	97	67.652	ENSACLG00000008064	utp20	99	67.783	Astatotilapia_calliptera
ENSAMXG00000021039	utp20	99	56.356	ENSBTAG00000003239	UTP20	99	59.038	Bos_taurus
ENSAMXG00000021039	utp20	79	35.075	WBGene00007050	utp-20	76	35.075	Caenorhabditis_elegans
ENSAMXG00000021039	utp20	99	56.150	ENSCJAG00000001913	UTP20	100	56.009	Callithrix_jacchus
ENSAMXG00000021039	utp20	99	55.897	ENSCAFG00000006964	UTP20	100	55.816	Canis_familiaris
ENSAMXG00000021039	utp20	99	55.932	ENSCAFG00020024305	UTP20	100	55.851	Canis_lupus_dingo
ENSAMXG00000021039	utp20	99	56.357	ENSCHIG00000009221	UTP20	100	55.926	Capra_hircus
ENSAMXG00000021039	utp20	99	55.733	ENSTSYG00000003040	UTP20	100	55.769	Carlito_syrichta
ENSAMXG00000021039	utp20	99	52.720	ENSCAPG00000014920	UTP20	100	52.661	Cavia_aperea
ENSAMXG00000021039	utp20	99	54.545	ENSCPOG00000003129	UTP20	100	54.426	Cavia_porcellus
ENSAMXG00000021039	utp20	99	55.827	ENSCCAG00000031422	UTP20	100	55.528	Cebus_capucinus
ENSAMXG00000021039	utp20	99	54.629	ENSCATG00000035636	UTP20	100	54.153	Cercocebus_atys
ENSAMXG00000021039	utp20	99	55.248	ENSCLAG00000011569	UTP20	100	55.115	Chinchilla_lanigera
ENSAMXG00000021039	utp20	99	56.294	ENSCSAG00000003388	UTP20	100	56.044	Chlorocebus_sabaeus
ENSAMXG00000021039	utp20	91	66.667	ENSCHOG00000003532	UTP20	94	66.667	Choloepus_hoffmanni
ENSAMXG00000021039	utp20	95	56.783	ENSCPBG00000004844	UTP20	99	57.212	Chrysemys_picta_bellii
ENSAMXG00000021039	utp20	95	30.592	ENSCSAVG00000008252	-	99	30.238	Ciona_savignyi
ENSAMXG00000021039	utp20	97	56.939	ENSCANG00000034768	UTP20	99	56.633	Colobus_angolensis_palliatus
ENSAMXG00000021039	utp20	99	56.088	ENSCGRG00001017151	Utp20	100	55.982	Cricetulus_griseus_chok1gshd
ENSAMXG00000021039	utp20	99	55.784	ENSCGRG00000008595	Utp20	100	55.678	Cricetulus_griseus_crigri
ENSAMXG00000021039	utp20	98	64.680	ENSCSEG00000014760	utp20	100	64.619	Cynoglossus_semilaevis
ENSAMXG00000021039	utp20	99	63.907	ENSCVAG00000001727	utp20	100	63.669	Cyprinodon_variegatus
ENSAMXG00000021039	utp20	99	73.276	ENSDARG00000099280	utp20	99	73.570	Danio_rerio
ENSAMXG00000021039	utp20	99	54.831	ENSDNOG00000016845	UTP20	100	55.072	Dasypus_novemcinctus
ENSAMXG00000021039	utp20	96	60.040	ENSDORG00000014762	Utp20	98	60.020	Dipodomys_ordii
ENSAMXG00000021039	utp20	91	72.794	ENSETEG00000019983	UTP20	89	72.794	Echinops_telfairi
ENSAMXG00000021039	utp20	99	55.994	ENSEASG00005019981	UTP20	100	55.894	Equus_asinus_asinus
ENSAMXG00000021039	utp20	99	56.100	ENSECAG00000006876	UTP20	100	56.000	Equus_caballus
ENSAMXG00000021039	utp20	72	64.286	ENSEEUG00000003774	UTP20	75	58.824	Erinaceus_europaeus
ENSAMXG00000021039	utp20	100	67.099	ENSELUG00000000798	utp20	100	66.935	Esox_lucius
ENSAMXG00000021039	utp20	99	56.592	ENSFCAG00000006150	UTP20	100	56.221	Felis_catus
ENSAMXG00000021039	utp20	94	56.222	ENSFALG00000011135	UTP20	100	56.285	Ficedula_albicollis
ENSAMXG00000021039	utp20	93	51.560	ENSFDAG00000007567	UTP20	97	51.629	Fukomys_damarensis
ENSAMXG00000021039	utp20	98	62.650	ENSFHEG00000004142	utp20	100	65.310	Fundulus_heteroclitus
ENSAMXG00000021039	utp20	99	60.425	ENSGMOG00000006762	utp20	100	60.877	Gadus_morhua
ENSAMXG00000021039	utp20	99	57.006	ENSGALG00000011643	UTP20	100	57.274	Gallus_gallus
ENSAMXG00000021039	utp20	97	64.001	ENSGAFG00000006986	utp20	100	63.873	Gambusia_affinis
ENSAMXG00000021039	utp20	99	64.198	ENSGACG00000019092	utp20	100	63.710	Gasterosteus_aculeatus
ENSAMXG00000021039	utp20	67	58.796	ENSGAGG00000011169	UTP20	97	58.901	Gopherus_agassizii
ENSAMXG00000021039	utp20	99	56.106	ENSGGOG00000004904	UTP20	100	55.799	Gorilla_gorilla
ENSAMXG00000021039	utp20	100	66.194	ENSHBUG00000010613	utp20	100	66.336	Haplochromis_burtoni
ENSAMXG00000021039	utp20	99	55.090	ENSHGLG00000006422	UTP20	100	54.961	Heterocephalus_glaber_female
ENSAMXG00000021039	utp20	99	53.849	ENSHGLG00100001086	UTP20	100	53.685	Heterocephalus_glaber_male
ENSAMXG00000021039	utp20	100	61.370	ENSHCOG00000005421	utp20	97	69.173	Hippocampus_comes
ENSAMXG00000021039	utp20	100	77.038	ENSIPUG00000013717	utp20	100	76.940	Ictalurus_punctatus
ENSAMXG00000021039	utp20	99	56.551	ENSSTOG00000015995	UTP20	100	56.394	Ictidomys_tridecemlineatus
ENSAMXG00000021039	utp20	99	54.649	ENSJJAG00000019321	Utp20	100	54.429	Jaculus_jaculus
ENSAMXG00000021039	utp20	100	62.297	ENSKMAG00000005972	utp20	100	62.527	Kryptolebias_marmoratus
ENSAMXG00000021039	utp20	98	65.321	ENSLBEG00000000781	utp20	100	65.369	Labrus_bergylta
ENSAMXG00000021039	utp20	79	59.694	ENSLACG00000010098	UTP20	99	59.514	Latimeria_chalumnae
ENSAMXG00000021039	utp20	93	61.431	ENSLOCG00000015197	utp20	93	70.745	Lepisosteus_oculatus
ENSAMXG00000021039	utp20	99	54.993	ENSLAFG00000012983	UTP20	100	55.250	Loxodonta_africana
ENSAMXG00000021039	utp20	99	56.365	ENSMFAG00000037766	UTP20	100	56.095	Macaca_fascicularis
ENSAMXG00000021039	utp20	99	56.400	ENSMMUG00000012891	UTP20	100	56.130	Macaca_mulatta
ENSAMXG00000021039	utp20	99	54.809	ENSMNEG00000037418	UTP20	100	54.478	Macaca_nemestrina
ENSAMXG00000021039	utp20	99	54.713	ENSMLEG00000029148	UTP20	100	54.452	Mandrillus_leucophaeus
ENSAMXG00000021039	utp20	100	66.643	ENSMAMG00000002063	utp20	100	66.643	Mastacembelus_armatus
ENSAMXG00000021039	utp20	100	66.395	ENSMZEG00005018123	utp20	100	66.454	Maylandia_zebra
ENSAMXG00000021039	utp20	99	56.865	ENSMGAG00000011726	UTP20	100	57.042	Meleagris_gallopavo
ENSAMXG00000021039	utp20	65	53.968	ENSMAUG00000011898	Utp20	99	53.939	Mesocricetus_auratus
ENSAMXG00000021039	utp20	99	53.602	ENSMICG00000015736	UTP20	100	53.437	Microcebus_murinus
ENSAMXG00000021039	utp20	99	54.942	ENSMOCG00000015242	Utp20	100	54.729	Microtus_ochrogaster
ENSAMXG00000021039	utp20	99	61.034	ENSMMOG00000003360	utp20	100	60.885	Mola_mola
ENSAMXG00000021039	utp20	99	55.536	ENSMODG00000003141	UTP20	100	55.434	Monodelphis_domestica
ENSAMXG00000021039	utp20	100	64.869	ENSMALG00000002723	utp20	100	64.658	Monopterus_albus
ENSAMXG00000021039	utp20	99	55.713	MGP_CAROLIEiJ_G0015713	Utp20	100	55.548	Mus_caroli
ENSAMXG00000021039	utp20	99	55.997	ENSMUSG00000004356	Utp20	100	55.902	Mus_musculus
ENSAMXG00000021039	utp20	99	55.769	MGP_PahariEiJ_G0031372	Utp20	100	55.567	Mus_pahari
ENSAMXG00000021039	utp20	99	55.962	MGP_SPRETEiJ_G0016531	Utp20	90	73.810	Mus_spretus
ENSAMXG00000021039	utp20	99	56.416	ENSMPUG00000011641	UTP20	100	56.272	Mustela_putorius_furo
ENSAMXG00000021039	utp20	99	56.405	ENSMLUG00000002313	UTP20	100	56.208	Myotis_lucifugus
ENSAMXG00000021039	utp20	99	55.993	ENSNGAG00000013738	Utp20	100	55.658	Nannospalax_galili
ENSAMXG00000021039	utp20	81	77.941	ENSNBRG00000019464	utp20	99	77.941	Neolamprologus_brichardi
ENSAMXG00000021039	utp20	99	56.486	ENSNLEG00000006166	UTP20	100	56.166	Nomascus_leucogenys
ENSAMXG00000021039	utp20	90	55.460	ENSMEUG00000015457	UTP20	85	55.096	Notamacropus_eugenii
ENSAMXG00000021039	utp20	86	75.796	ENSOPRG00000010546	UTP20	87	75.796	Ochotona_princeps
ENSAMXG00000021039	utp20	99	55.410	ENSODEG00000013411	UTP20	100	55.115	Octodon_degus
ENSAMXG00000021039	utp20	100	67.019	ENSONIG00000009910	utp20	100	67.125	Oreochromis_niloticus
ENSAMXG00000021039	utp20	99	56.917	ENSOANG00000005578	UTP20	99	56.981	Ornithorhynchus_anatinus
ENSAMXG00000021039	utp20	99	56.358	ENSOCUG00000010475	UTP20	100	56.217	Oryctolagus_cuniculus
ENSAMXG00000021039	utp20	93	64.135	ENSORLG00000008900	utp20	100	64.192	Oryzias_latipes
ENSAMXG00000021039	utp20	94	64.404	ENSORLG00020005879	utp20	100	64.233	Oryzias_latipes_hni
ENSAMXG00000021039	utp20	96	62.687	ENSORLG00015002843	utp20	100	63.095	Oryzias_latipes_hsok
ENSAMXG00000021039	utp20	98	62.627	ENSOMEG00000023583	utp20	100	62.776	Oryzias_melastigma
ENSAMXG00000021039	utp20	99	55.840	ENSOGAG00000015130	UTP20	100	55.769	Otolemur_garnettii
ENSAMXG00000021039	utp20	99	56.463	ENSOARG00000014722	UTP20	100	56.392	Ovis_aries
ENSAMXG00000021039	utp20	99	56.551	ENSPPAG00000001381	UTP20	100	56.303	Pan_paniscus
ENSAMXG00000021039	utp20	99	56.407	ENSPPRG00000001026	UTP20	100	56.079	Panthera_pardus
ENSAMXG00000021039	utp20	99	56.380	ENSPTIG00000020972	UTP20	100	56.044	Panthera_tigris_altaica
ENSAMXG00000021039	utp20	99	56.551	ENSPTRG00000005349	UTP20	100	56.303	Pan_troglodytes
ENSAMXG00000021039	utp20	99	56.414	ENSPANG00000020388	UTP20	100	56.130	Papio_anubis
ENSAMXG00000021039	utp20	100	64.554	ENSPKIG00000007196	utp20	100	64.460	Paramormyrops_kingsleyae
ENSAMXG00000021039	utp20	94	56.858	ENSPSIG00000016689	UTP20	100	56.913	Pelodiscus_sinensis
ENSAMXG00000021039	utp20	100	64.357	ENSPMGG00000004066	utp20	100	64.470	Periophthalmus_magnuspinnatus
ENSAMXG00000021039	utp20	99	56.088	ENSPEMG00000024120	Utp20	100	56.166	Peromyscus_maniculatus_bairdii
ENSAMXG00000021039	utp20	98	56.629	ENSPCIG00000009298	UTP20	99	56.629	Phascolarctos_cinereus
ENSAMXG00000021039	utp20	92	64.852	ENSPFOG00000003312	utp20	100	65.211	Poecilia_formosa
ENSAMXG00000021039	utp20	98	63.541	ENSPLAG00000012874	utp20	100	63.133	Poecilia_latipinna
ENSAMXG00000021039	utp20	98	61.720	ENSPMEG00000005915	utp20	100	61.577	Poecilia_mexicana
ENSAMXG00000021039	utp20	98	63.927	ENSPREG00000013285	utp20	100	63.837	Poecilia_reticulata
ENSAMXG00000021039	utp20	88	56.665	ENSPPYG00000004871	UTP20	100	56.396	Pongo_abelii
ENSAMXG00000021039	utp20	81	64.646	ENSPCAG00000012791	UTP20	81	64.646	Procavia_capensis
ENSAMXG00000021039	utp20	98	55.112	ENSPCOG00000024948	UTP20	100	54.745	Propithecus_coquereli
ENSAMXG00000021039	utp20	99	55.257	ENSPVAG00000008113	UTP20	100	54.871	Pteropus_vampyrus
ENSAMXG00000021039	utp20	100	65.914	ENSPNYG00000011561	utp20	100	66.101	Pundamilia_nyererei
ENSAMXG00000021039	utp20	100	79.412	ENSPNAG00000006176	utp20	100	79.299	Pygocentrus_nattereri
ENSAMXG00000021039	utp20	99	55.607	ENSRNOG00000005823	Utp20	100	55.599	Rattus_norvegicus
ENSAMXG00000021039	utp20	99	54.818	ENSRBIG00000025384	UTP20	100	54.722	Rhinopithecus_bieti
ENSAMXG00000021039	utp20	99	56.414	ENSRROG00000041254	UTP20	100	56.166	Rhinopithecus_roxellana
ENSAMXG00000021039	utp20	99	56.020	ENSSBOG00000035762	UTP20	100	55.772	Saimiri_boliviensis_boliviensis
ENSAMXG00000021039	utp20	98	54.434	ENSSHAG00000002298	UTP20	95	58.650	Sarcophilus_harrisii
ENSAMXG00000021039	utp20	99	65.794	ENSSFOG00015001674	utp20	100	65.514	Scleropages_formosus
ENSAMXG00000021039	utp20	98	64.448	ENSSMAG00000016460	utp20	100	64.812	Scophthalmus_maximus
ENSAMXG00000021039	utp20	100	68.183	ENSSDUG00000013730	utp20	100	67.515	Seriola_dumerili
ENSAMXG00000021039	utp20	100	67.972	ENSSLDG00000012844	utp20	100	67.769	Seriola_lalandi_dorsalis
ENSAMXG00000021039	utp20	60	85.185	ENSSARG00000002796	-	59	73.810	Sorex_araneus
ENSAMXG00000021039	utp20	99	55.773	ENSSPUG00000004513	UTP20	99	55.619	Sphenodon_punctatus
ENSAMXG00000021039	utp20	100	66.228	ENSSPAG00000014674	utp20	100	66.370	Stegastes_partitus
ENSAMXG00000021039	utp20	99	55.982	ENSSSCG00000000869	UTP20	100	55.729	Sus_scrofa
ENSAMXG00000021039	utp20	76	57.156	ENSTGUG00000009053	-	100	57.341	Taeniopygia_guttata
ENSAMXG00000021039	utp20	99	65.791	ENSTRUG00000005849	utp20	99	65.390	Takifugu_rubripes
ENSAMXG00000021039	utp20	99	63.829	ENSTNIG00000006921	utp20	100	63.649	Tetraodon_nigroviridis
ENSAMXG00000021039	utp20	86	59.223	ENSTBEG00000011917	UTP20	91	53.257	Tupaia_belangeri
ENSAMXG00000021039	utp20	97	55.614	ENSTTRG00000017195	UTP20	98	55.532	Tursiops_truncatus
ENSAMXG00000021039	utp20	99	56.559	ENSUAMG00000016363	UTP20	100	56.374	Ursus_americanus
ENSAMXG00000021039	utp20	99	55.941	ENSUMAG00000000077	UTP20	100	55.772	Ursus_maritimus
ENSAMXG00000021039	utp20	89	56.362	ENSVPAG00000011620	UTP20	92	56.117	Vicugna_pacos
ENSAMXG00000021039	utp20	99	56.075	ENSVVUG00000018110	UTP20	100	55.840	Vulpes_vulpes
ENSAMXG00000021039	utp20	98	56.855	ENSXETG00000032346	UTP20	100	56.685	Xenopus_tropicalis
ENSAMXG00000021039	utp20	98	63.210	ENSXMAG00000006503	utp20	100	63.183	Xiphophorus_maculatus