EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000021056 (Gene tree)
Gene ID: 103045870
Gene Symbol: arl1
Alias: zgc:92883
Full Name: ADP ribosylation factor like GTPase 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 3635 bases
Position: chr7:7549007-7552641
Accession: 103045870
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000040903	MMR_HSR1	PF01926.23	2.1e-05	1	1
ENSAMXP00000021678	MMR_HSR1	PF01926.23	2.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000021678	-	734	XM_007252723	ENSAMXP00000021678	181 (aa)	XP_007252785	W5LPA9
ENSAMXT00000055690	-	525	-	ENSAMXP00000040903	174 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000021056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000021056's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000021056	arl1	97	39.560	ENSAMXG00000006638	arl4aa	91	39.560
ENSAMXG00000021056	arl1	99	58.333	ENSAMXG00000004249	-	100	58.333
ENSAMXG00000021056	arl1	71	31.250	ENSAMXG00000013054	rab22a	64	31.250
ENSAMXG00000021056	arl1	99	32.184	ENSAMXG00000030683	arl8ba	96	32.022
ENSAMXG00000021056	arl1	99	58.889	ENSAMXG00000031467	arf4a	100	58.889
ENSAMXG00000021056	arl1	100	56.354	ENSAMXG00000016434	arf3a	79	56.354
ENSAMXG00000021056	arl1	100	30.811	ENSAMXG00000039062	arl8a	99	30.811
ENSAMXG00000021056	arl1	72	30.370	ENSAMXG00000044118	srprb	51	31.111
ENSAMXG00000021056	arl1	98	36.612	ENSAMXG00000035902	ARL6	98	36.612
ENSAMXG00000021056	arl1	99	43.646	ENSAMXG00000019160	arl3l1	96	43.646
ENSAMXG00000021056	arl1	91	30.508	ENSAMXG00000034192	-	81	30.508
ENSAMXG00000021056	arl1	100	57.471	ENSAMXG00000037485	arf2b	100	57.471
ENSAMXG00000021056	arl1	99	58.140	ENSAMXG00000035742	arf2a	99	58.101
ENSAMXG00000021056	arl1	53	33.333	ENSAMXG00000012438	tysnd1	77	33.333
ENSAMXG00000021056	arl1	94	39.888	ENSAMXG00000025423	arl4ab	90	39.888
ENSAMXG00000021056	arl1	95	46.667	ENSAMXG00000034370	-	91	46.667
ENSAMXG00000021056	arl1	99	58.333	ENSAMXG00000031774	ARF5	100	58.333
ENSAMXG00000021056	arl1	96	46.821	ENSAMXG00000031771	arl5c	96	46.821
ENSAMXG00000021056	arl1	96	39.106	ENSAMXG00000024926	arl4cb	93	39.106
ENSAMXG00000021056	arl1	99	48.837	ENSAMXG00000010445	arl8	100	47.778
ENSAMXG00000021056	arl1	93	40.588	ENSAMXG00000012281	arl11	94	40.588
ENSAMXG00000021056	arl1	99	32.759	ENSAMXG00000032775	arl8bb	94	32.759
ENSAMXG00000021056	arl1	98	34.759	ENSAMXG00000042798	arfrp1	93	34.759
ENSAMXG00000021056	arl1	97	44.068	ENSAMXG00000018516	arl3l2	95	44.068
ENSAMXG00000021056	arl1	100	56.906	ENSAMXG00000019845	arf1	100	56.906
ENSAMXG00000021056	arl1	96	37.288	ENSAMXG00000024897	-	93	37.288
ENSAMXG00000021056	arl1	95	43.976	ENSAMXG00000043381	zgc:110197	97	43.976
ENSAMXG00000021056	arl1	99	48.333	ENSAMXG00000011059	arl5a	100	48.333
ENSAMXG00000021056	arl1	99	58.333	ENSAMXG00000038224	-	100	58.333
ENSAMXG00000021056	arl1	97	42.935	ENSAMXG00000037720	arl3	99	42.935
ENSAMXG00000021056	arl1	58	35.849	ENSAMXG00000018108	sar1b	76	35.849
ENSAMXG00000021056	arl1	95	44.848	ENSAMXG00000011499	arl2	93	43.312

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000021056	arl1	96	95.808	ENSG00000120805	ARL1	100	95.732	Homo_sapiens
ENSAMXG00000021056	arl1	100	97.238	ENSAPOG00000002469	arl1	100	97.238	Acanthochromis_polyacanthus
ENSAMXG00000021056	arl1	96	95.808	ENSAMEG00000016452	ARL1	99	95.000	Ailuropoda_melanoleuca
ENSAMXG00000021056	arl1	99	96.089	ENSACIG00000007953	arl1	100	96.089	Amphilophus_citrinellus
ENSAMXG00000021056	arl1	100	97.238	ENSAOCG00000013008	arl1	100	97.238	Amphiprion_ocellaris
ENSAMXG00000021056	arl1	100	97.238	ENSAPEG00000013187	arl1	100	97.238	Amphiprion_percula
ENSAMXG00000021056	arl1	99	98.883	ENSATEG00000005559	arl1	96	98.883	Anabas_testudineus
ENSAMXG00000021056	arl1	100	94.828	ENSAPLG00000016092	ARL1	100	94.475	Anas_platyrhynchos
ENSAMXG00000021056	arl1	100	95.580	ENSACAG00000011602	ARL1	100	95.580	Anolis_carolinensis
ENSAMXG00000021056	arl1	96	96.407	ENSANAG00000023491	ARL1	100	95.580	Aotus_nancymaae
ENSAMXG00000021056	arl1	100	98.343	ENSACLG00000008188	arl1	100	98.343	Astatotilapia_calliptera
ENSAMXG00000021056	arl1	96	96.407	ENSBTAG00000011883	ARL1	100	95.580	Bos_taurus
ENSAMXG00000021056	arl1	100	73.481	WBGene00000187	arl-1	100	73.481	Caenorhabditis_elegans
ENSAMXG00000021056	arl1	96	96.407	ENSCJAG00000001966	ARL1	100	95.580	Callithrix_jacchus
ENSAMXG00000021056	arl1	96	96.407	ENSCAFG00000006992	ARL1	100	95.580	Canis_familiaris
ENSAMXG00000021056	arl1	96	96.407	ENSCAFG00020024333	ARL1	100	95.580	Canis_lupus_dingo
ENSAMXG00000021056	arl1	98	96.471	ENSCHIG00000024524	ARL1	100	96.471	Capra_hircus
ENSAMXG00000021056	arl1	97	96.429	ENSTSYG00000013257	-	100	95.531	Carlito_syrichta
ENSAMXG00000021056	arl1	79	94.928	ENSCAPG00000001010	ARL1	100	94.928	Cavia_aperea
ENSAMXG00000021056	arl1	96	95.210	ENSCPOG00000026014	ARL1	100	94.475	Cavia_porcellus
ENSAMXG00000021056	arl1	96	96.407	ENSCCAG00000025938	ARL1	100	95.580	Cebus_capucinus
ENSAMXG00000021056	arl1	96	95.210	ENSCLAG00000008180	ARL1	100	93.923	Chinchilla_lanigera
ENSAMXG00000021056	arl1	96	95.808	ENSCSAG00000003368	ARL1	100	95.028	Chlorocebus_sabaeus
ENSAMXG00000021056	arl1	100	95.028	ENSCPBG00000004906	ARL1	100	95.028	Chrysemys_picta_bellii
ENSAMXG00000021056	arl1	97	44.118	ENSCING00000004577	-	97	44.118	Ciona_intestinalis
ENSAMXG00000021056	arl1	99	80.000	ENSCING00000019794	-	100	80.000	Ciona_intestinalis
ENSAMXG00000021056	arl1	99	79.444	ENSCSAVG00000007620	-	98	79.444	Ciona_savignyi
ENSAMXG00000021056	arl1	96	95.210	ENSCANG00000033548	ARL1	100	94.475	Colobus_angolensis_palliatus
ENSAMXG00000021056	arl1	96	95.808	ENSCGRG00001010446	Arl1	100	95.028	Cricetulus_griseus_chok1gshd
ENSAMXG00000021056	arl1	96	95.210	ENSCGRG00000009856	Arl1	90	93.923	Cricetulus_griseus_crigri
ENSAMXG00000021056	arl1	100	97.238	ENSCVAG00000001731	arl1	100	97.238	Cyprinodon_variegatus
ENSAMXG00000021056	arl1	100	99.448	ENSDARG00000101680	arl1	100	99.448	Danio_rerio
ENSAMXG00000021056	arl1	96	96.407	ENSDORG00000014770	Arl1	95	95.028	Dipodomys_ordii
ENSAMXG00000021056	arl1	100	78.453	FBgn0000115	Arl1	100	78.453	Drosophila_melanogaster
ENSAMXG00000021056	arl1	100	92.000	ENSETEG00000020310	ARL1	100	92.697	Echinops_telfairi
ENSAMXG00000021056	arl1	96	96.407	ENSEASG00005020057	ARL1	100	95.580	Equus_asinus_asinus
ENSAMXG00000021056	arl1	99	95.349	ENSECAG00000000372	ARL1	100	95.580	Equus_caballus
ENSAMXG00000021056	arl1	100	98.343	ENSELUG00000018440	arl1	100	98.343	Esox_lucius
ENSAMXG00000021056	arl1	100	98.343	ENSELUG00000001287	-	100	98.343	Esox_lucius
ENSAMXG00000021056	arl1	96	96.407	ENSFCAG00000030871	ARL1	100	95.580	Felis_catus
ENSAMXG00000021056	arl1	100	95.028	ENSFALG00000011156	ARL1	100	95.028	Ficedula_albicollis
ENSAMXG00000021056	arl1	96	95.210	ENSFDAG00000016393	ARL1	100	93.923	Fukomys_damarensis
ENSAMXG00000021056	arl1	99	97.765	ENSFHEG00000004171	arl1	95	97.765	Fundulus_heteroclitus
ENSAMXG00000021056	arl1	100	98.343	ENSGMOG00000006859	arl1	100	98.343	Gadus_morhua
ENSAMXG00000021056	arl1	100	95.028	ENSGALG00000011651	ARL1	100	95.028	Gallus_gallus
ENSAMXG00000021056	arl1	95	96.970	ENSGAFG00000006973	arl1	99	98.788	Gambusia_affinis
ENSAMXG00000021056	arl1	100	96.685	ENSGACG00000019098	arl1	100	96.685	Gasterosteus_aculeatus
ENSAMXG00000021056	arl1	96	95.808	ENSGGOG00000010788	ARL1	100	95.028	Gorilla_gorilla
ENSAMXG00000021056	arl1	100	98.343	ENSHBUG00000010636	arl1	100	98.343	Haplochromis_burtoni
ENSAMXG00000021056	arl1	96	95.808	ENSHGLG00000004909	ARL1	100	95.028	Heterocephalus_glaber_female
ENSAMXG00000021056	arl1	96	95.808	ENSHGLG00100001832	ARL1	100	94.475	Heterocephalus_glaber_male
ENSAMXG00000021056	arl1	100	97.790	ENSHCOG00000005566	arl1	100	97.790	Hippocampus_comes
ENSAMXG00000021056	arl1	99	99.441	ENSIPUG00000013834	arl1	96	99.441	Ictalurus_punctatus
ENSAMXG00000021056	arl1	96	96.407	ENSSTOG00000016022	ARL1	100	95.580	Ictidomys_tridecemlineatus
ENSAMXG00000021056	arl1	96	86.228	ENSJJAG00000000452	-	100	85.635	Jaculus_jaculus
ENSAMXG00000021056	arl1	89	99.355	ENSKMAG00000005931	arl1	84	99.355	Kryptolebias_marmoratus
ENSAMXG00000021056	arl1	100	95.402	ENSLBEG00000000991	arl1	99	97.126	Labrus_bergylta
ENSAMXG00000021056	arl1	96	96.407	ENSLAFG00000026143	ARL1	95	95.580	Loxodonta_africana
ENSAMXG00000021056	arl1	96	95.808	ENSMFAG00000035725	ARL1	100	95.028	Macaca_fascicularis
ENSAMXG00000021056	arl1	96	95.808	ENSMMUG00000031610	ARL1	100	94.475	Macaca_mulatta
ENSAMXG00000021056	arl1	96	95.808	ENSMNEG00000007067	ARL1	100	95.028	Macaca_nemestrina
ENSAMXG00000021056	arl1	94	95.732	ENSMLEG00000036143	ARL1	100	95.732	Mandrillus_leucophaeus
ENSAMXG00000021056	arl1	99	97.207	ENSMAMG00000001968	arl1	100	97.207	Mastacembelus_armatus
ENSAMXG00000021056	arl1	100	98.343	ENSMZEG00005018136	arl1	100	98.343	Maylandia_zebra
ENSAMXG00000021056	arl1	100	94.828	ENSMGAG00000011748	ARL1	100	94.475	Meleagris_gallopavo
ENSAMXG00000021056	arl1	96	95.808	ENSMAUG00000021923	Arl1	100	95.028	Mesocricetus_auratus
ENSAMXG00000021056	arl1	96	96.407	ENSMICG00000015801	ARL1	100	95.580	Microcebus_murinus
ENSAMXG00000021056	arl1	96	95.808	ENSMOCG00000005852	Arl1	100	95.028	Microtus_ochrogaster
ENSAMXG00000021056	arl1	96	94.611	ENSMMOG00000003353	arl1	69	93.678	Mola_mola
ENSAMXG00000021056	arl1	100	95.028	ENSMODG00000003056	ARL1	100	95.028	Monodelphis_domestica
ENSAMXG00000021056	arl1	99	94.972	ENSMALG00000003003	arl1	99	96.970	Monopterus_albus
ENSAMXG00000021056	arl1	96	95.808	MGP_CAROLIEiJ_G0015712	Arl1	100	95.028	Mus_caroli
ENSAMXG00000021056	arl1	96	95.808	ENSMUSG00000060904	Arl1	100	95.652	Mus_musculus
ENSAMXG00000021056	arl1	96	95.808	MGP_PahariEiJ_G0031373	Arl1	100	95.028	Mus_pahari
ENSAMXG00000021056	arl1	96	95.808	MGP_SPRETEiJ_G0016530	Arl1	100	95.028	Mus_spretus
ENSAMXG00000021056	arl1	96	95.833	ENSMPUG00000011822	ARL1	99	95.028	Mustela_putorius_furo
ENSAMXG00000021056	arl1	96	91.018	ENSMLUG00000025321	-	100	90.608	Myotis_lucifugus
ENSAMXG00000021056	arl1	91	96.835	ENSMLUG00000002351	-	100	95.349	Myotis_lucifugus
ENSAMXG00000021056	arl1	79	95.652	ENSNGAG00000007879	-	100	95.652	Nannospalax_galili
ENSAMXG00000021056	arl1	100	98.343	ENSNBRG00000019783	arl1	100	98.343	Neolamprologus_brichardi
ENSAMXG00000021056	arl1	94	95.732	ENSNLEG00000006223	ARL1	100	95.732	Nomascus_leucogenys
ENSAMXG00000021056	arl1	100	95.028	ENSMEUG00000015525	ARL1	95	95.028	Notamacropus_eugenii
ENSAMXG00000021056	arl1	96	95.808	ENSODEG00000019783	-	100	95.028	Octodon_degus
ENSAMXG00000021056	arl1	96	95.808	ENSODEG00000010531	-	100	95.000	Octodon_degus
ENSAMXG00000021056	arl1	96	94.012	ENSODEG00000019880	-	100	93.370	Octodon_degus
ENSAMXG00000021056	arl1	100	98.343	ENSONIG00000009921	arl1	100	98.343	Oreochromis_niloticus
ENSAMXG00000021056	arl1	96	96.407	ENSOCUG00000002217	ARL1	96	95.580	Oryctolagus_cuniculus
ENSAMXG00000021056	arl1	95	96.970	ENSORLG00000008909	arl1	98	98.193	Oryzias_latipes
ENSAMXG00000021056	arl1	100	98.343	ENSORLG00020005754	arl1	100	98.343	Oryzias_latipes_hni
ENSAMXG00000021056	arl1	100	98.343	ENSORLG00015002736	arl1	100	98.343	Oryzias_latipes_hsok
ENSAMXG00000021056	arl1	100	96.552	ENSOMEG00000023497	arl1	93	98.276	Oryzias_melastigma
ENSAMXG00000021056	arl1	96	95.808	ENSOGAG00000015144	ARL1	100	95.028	Otolemur_garnettii
ENSAMXG00000021056	arl1	96	96.407	ENSOARG00000015007	ARL1	100	95.580	Ovis_aries
ENSAMXG00000021056	arl1	96	95.808	ENSPPAG00000034860	ARL1	100	95.028	Pan_paniscus
ENSAMXG00000021056	arl1	96	96.407	ENSPPRG00000023908	ARL1	100	95.580	Panthera_pardus
ENSAMXG00000021056	arl1	97	96.429	ENSPTIG00000002154	-	100	95.531	Panthera_tigris_altaica
ENSAMXG00000021056	arl1	96	95.808	ENSPTRG00000005350	ARL1	100	95.028	Pan_troglodytes
ENSAMXG00000021056	arl1	98	95.882	ENSPANG00000018816	ARL1	97	94.972	Papio_anubis
ENSAMXG00000021056	arl1	100	99.448	ENSPKIG00000007118	arl1	100	100.000	Paramormyrops_kingsleyae
ENSAMXG00000021056	arl1	100	95.977	ENSPSIG00000006539	ARL1	100	95.580	Pelodiscus_sinensis
ENSAMXG00000021056	arl1	95	93.333	ENSPMGG00000004070	arl1	98	95.152	Periophthalmus_magnuspinnatus
ENSAMXG00000021056	arl1	96	95.808	ENSPEMG00000008781	Arl1	100	95.028	Peromyscus_maniculatus_bairdii
ENSAMXG00000021056	arl1	98	95.882	ENSPMAG00000002070	arl1	100	93.370	Petromyzon_marinus
ENSAMXG00000021056	arl1	100	94.828	ENSPCIG00000009683	-	97	95.000	Phascolarctos_cinereus
ENSAMXG00000021056	arl1	100	97.790	ENSPFOG00000003241	arl1	100	97.790	Poecilia_formosa
ENSAMXG00000021056	arl1	100	97.790	ENSPLAG00000012898	arl1	100	97.790	Poecilia_latipinna
ENSAMXG00000021056	arl1	99	97.778	ENSPMEG00000005938	arl1	96	97.778	Poecilia_mexicana
ENSAMXG00000021056	arl1	99	97.778	ENSPREG00000013361	arl1	96	97.778	Poecilia_reticulata
ENSAMXG00000021056	arl1	96	95.808	ENSPPYG00000004872	ARL1	100	95.028	Pongo_abelii
ENSAMXG00000021056	arl1	99	93.642	ENSPCOG00000015554	-	100	92.265	Propithecus_coquereli
ENSAMXG00000021056	arl1	96	96.407	ENSPVAG00000008119	ARL1	95	95.580	Pteropus_vampyrus
ENSAMXG00000021056	arl1	100	98.343	ENSPNYG00000011671	arl1	100	98.343	Pundamilia_nyererei
ENSAMXG00000021056	arl1	95	98.182	ENSPNAG00000028795	arl1	99	100.000	Pygocentrus_nattereri
ENSAMXG00000021056	arl1	96	95.808	ENSRNOG00000005763	Arl1	100	95.028	Rattus_norvegicus
ENSAMXG00000021056	arl1	96	95.808	ENSRBIG00000042560	ARL1	100	95.028	Rhinopithecus_bieti
ENSAMXG00000021056	arl1	96	95.808	ENSRROG00000037996	ARL1	100	95.028	Rhinopithecus_roxellana
ENSAMXG00000021056	arl1	96	96.407	ENSSBOG00000024352	-	100	95.580	Saimiri_boliviensis_boliviensis
ENSAMXG00000021056	arl1	100	94.828	ENSSHAG00000004634	ARL1	100	94.475	Sarcophilus_harrisii
ENSAMXG00000021056	arl1	100	99.448	ENSSFOG00015001665	arl1	100	99.448	Scleropages_formosus
ENSAMXG00000021056	arl1	100	97.238	ENSSMAG00000016416	arl1	100	97.238	Scophthalmus_maximus
ENSAMXG00000021056	arl1	95	96.970	ENSSDUG00000013898	arl1	95	97.041	Seriola_dumerili
ENSAMXG00000021056	arl1	100	98.343	ENSSLDG00000012946	arl1	100	98.343	Seriola_lalandi_dorsalis
ENSAMXG00000021056	arl1	97	95.238	ENSSARG00000013944	ARL1	100	94.413	Sorex_araneus
ENSAMXG00000021056	arl1	100	95.580	ENSSPUG00000004578	ARL1	100	95.580	Sphenodon_punctatus
ENSAMXG00000021056	arl1	100	97.790	ENSSPAG00000014633	arl1	100	97.790	Stegastes_partitus
ENSAMXG00000021056	arl1	96	96.407	ENSSSCG00000000870	ARL1	100	95.580	Sus_scrofa
ENSAMXG00000021056	arl1	100	94.828	ENSTGUG00000009085	-	100	94.972	Taeniopygia_guttata
ENSAMXG00000021056	arl1	100	95.580	ENSTRUG00000006254	arl1	100	95.580	Takifugu_rubripes
ENSAMXG00000021056	arl1	100	95.028	ENSTNIG00000006920	arl1	99	95.028	Tetraodon_nigroviridis
ENSAMXG00000021056	arl1	96	94.643	ENSTBEG00000015546	ARL1	100	93.956	Tupaia_belangeri
ENSAMXG00000021056	arl1	96	96.407	ENSTTRG00000017202	ARL1	95	95.580	Tursiops_truncatus
ENSAMXG00000021056	arl1	96	96.407	ENSUMAG00000019547	ARL1	100	95.580	Ursus_maritimus
ENSAMXG00000021056	arl1	96	96.407	ENSVPAG00000011621	ARL1	95	95.580	Vicugna_pacos
ENSAMXG00000021056	arl1	96	96.407	ENSVVUG00000018044	ARL1	100	95.580	Vulpes_vulpes
ENSAMXG00000021056	arl1	100	97.238	ENSXETG00000002540	arl1	100	97.238	Xenopus_tropicalis
ENSAMXG00000021056	arl1	99	96.089	ENSXMAG00000028338	arl1	100	96.089	Xiphophorus_maculatus