EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000021495 (Gene tree)
Gene ID: 103042885
Gene Symbol: arl13a
Alias: zgc:73398
Full Name: ADP ribosylation factor like GTPase 13A
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 9672 bases
Position: chr24:16535973-16545644
Accession: 103042885
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000042923	MMR_HSR1	PF01926.23	9.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000022137	-	1326	XM_022683658	ENSAMXP00000022137	441 (aa)	XP_022539379	W5LQ50
ENSAMXT00000051694	-	1152	-	ENSAMXP00000042923	383 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000021495's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000021495's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000021495	arl13a	94	34.865	ENSAMXG00000042824	arl13b	88	38.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000021495	arl13a	98	58.273	ENSACIG00000012235	arl13a	99	58.072	Amphilophus_citrinellus
ENSAMXG00000021495	arl13a	98	56.699	ENSAOCG00000024309	arl13a	95	57.177	Amphiprion_ocellaris
ENSAMXG00000021495	arl13a	98	58.993	ENSAPEG00000006626	arl13a	94	59.712	Amphiprion_percula
ENSAMXG00000021495	arl13a	98	59.712	ENSATEG00000018113	arl13a	94	60.048	Anabas_testudineus
ENSAMXG00000021495	arl13a	98	58.894	ENSACLG00000000738	arl13a	99	57.971	Astatotilapia_calliptera
ENSAMXG00000021495	arl13a	59	47.111	ENSCPBG00000014304	ARL13A	84	47.111	Chrysemys_picta_bellii
ENSAMXG00000021495	arl13a	52	38.806	ENSCGRG00001021947	Arl13a	53	38.806	Cricetulus_griseus_chok1gshd
ENSAMXG00000021495	arl13a	52	38.806	ENSCGRG00000007297	Arl13a	53	38.806	Cricetulus_griseus_crigri
ENSAMXG00000021495	arl13a	98	48.810	ENSCSEG00000002533	arl13a	99	48.694	Cynoglossus_semilaevis
ENSAMXG00000021495	arl13a	98	58.950	ENSCVAG00000005783	arl13a	93	59.472	Cyprinodon_variegatus
ENSAMXG00000021495	arl13a	99	63.309	ENSDARG00000052575	arl13a	94	64.269	Danio_rerio
ENSAMXG00000021495	arl13a	98	60.621	ENSFHEG00000017023	arl13a	93	60.337	Fundulus_heteroclitus
ENSAMXG00000021495	arl13a	98	58.711	ENSGAFG00000019994	arl13a	99	54.306	Gambusia_affinis
ENSAMXG00000021495	arl13a	98	54.916	ENSGACG00000017318	arl13a	99	55.156	Gasterosteus_aculeatus
ENSAMXG00000021495	arl13a	98	61.005	ENSHBUG00000016100	arl13a	94	60.096	Haplochromis_burtoni
ENSAMXG00000021495	arl13a	98	56.867	ENSHCOG00000005206	arl13a	99	56.901	Hippocampus_comes
ENSAMXG00000021495	arl13a	100	64.439	ENSIPUG00000017720	arl13a	100	63.549	Ictalurus_punctatus
ENSAMXG00000021495	arl13a	98	57.971	ENSKMAG00000001139	arl13a	93	57.971	Kryptolebias_marmoratus
ENSAMXG00000021495	arl13a	98	61.244	ENSLBEG00000028724	arl13a	93	61.298	Labrus_bergylta
ENSAMXG00000021495	arl13a	98	49.640	ENSLOCG00000015307	arl13a	94	50.000	Lepisosteus_oculatus
ENSAMXG00000021495	arl13a	98	57.554	ENSMAMG00000020385	arl13a	99	56.872	Mastacembelus_armatus
ENSAMXG00000021495	arl13a	98	61.722	ENSMZEG00005007052	arl13a	99	60.096	Maylandia_zebra
ENSAMXG00000021495	arl13a	52	40.097	ENSMAUG00000001355	-	51	40.097	Mesocricetus_auratus
ENSAMXG00000021495	arl13a	52	40.097	ENSMAUG00000010729	-	51	40.097	Mesocricetus_auratus
ENSAMXG00000021495	arl13a	98	54.327	ENSMMOG00000000880	arl13a	99	54.479	Mola_mola
ENSAMXG00000021495	arl13a	60	72.489	ENSMALG00000009029	arl13a	99	50.980	Monopterus_albus
ENSAMXG00000021495	arl13a	52	38.500	MGP_CAROLIEiJ_G0033386	Arl13a	53	38.500	Mus_caroli
ENSAMXG00000021495	arl13a	52	39.000	ENSMUSG00000052549	Arl13a	54	39.000	Mus_musculus
ENSAMXG00000021495	arl13a	52	40.196	MGP_PahariEiJ_G0031926	Arl13a	53	39.500	Mus_pahari
ENSAMXG00000021495	arl13a	52	39.000	MGP_SPRETEiJ_G0034551	Arl13a	53	39.000	Mus_spretus
ENSAMXG00000021495	arl13a	98	60.577	ENSNBRG00000021766	arl13a	99	59.179	Neolamprologus_brichardi
ENSAMXG00000021495	arl13a	98	61.190	ENSONIG00000002645	arl13a	99	60.817	Oreochromis_niloticus
ENSAMXG00000021495	arl13a	98	58.950	ENSORLG00000001425	arl13a	94	57.971	Oryzias_latipes
ENSAMXG00000021495	arl13a	98	58.234	ENSORLG00020021844	arl13a	94	58.213	Oryzias_latipes_hni
ENSAMXG00000021495	arl13a	98	58.711	ENSORLG00015011862	arl13a	99	57.971	Oryzias_latipes_hsok
ENSAMXG00000021495	arl13a	98	57.518	ENSOMEG00000015603	arl13a	94	57.729	Oryzias_melastigma
ENSAMXG00000021495	arl13a	98	47.454	ENSPKIG00000013558	arl13a	97	49.406	Paramormyrops_kingsleyae
ENSAMXG00000021495	arl13a	58	47.534	ENSPSIG00000003515	ARL13A	100	47.321	Pelodiscus_sinensis
ENSAMXG00000021495	arl13a	98	52.278	ENSPMGG00000017973	arl13a	99	52.998	Periophthalmus_magnuspinnatus
ENSAMXG00000021495	arl13a	98	58.072	ENSPFOG00000016707	arl13a	93	59.036	Poecilia_formosa
ENSAMXG00000021495	arl13a	98	55.072	ENSPLAG00000011307	arl13a	57	76.233	Poecilia_latipinna
ENSAMXG00000021495	arl13a	98	58.894	ENSPMEG00000017855	arl13a	93	59.375	Poecilia_mexicana
ENSAMXG00000021495	arl13a	98	58.413	ENSPREG00000011435	arl13a	93	58.894	Poecilia_reticulata
ENSAMXG00000021495	arl13a	98	58.894	ENSPNYG00000011485	arl13a	99	57.971	Pundamilia_nyererei
ENSAMXG00000021495	arl13a	52	41.500	ENSRNOG00000055454	Arl13a	51	41.500	Rattus_norvegicus
ENSAMXG00000021495	arl13a	99	54.501	ENSSFOG00015010065	arl13a	99	54.612	Scleropages_formosus
ENSAMXG00000021495	arl13a	98	55.875	ENSSMAG00000013557	arl13a	99	55.981	Scophthalmus_maximus
ENSAMXG00000021495	arl13a	98	53.995	ENSSDUG00000000933	arl13a	99	54.479	Seriola_dumerili
ENSAMXG00000021495	arl13a	98	60.337	ENSSLDG00000009973	arl13a	94	59.615	Seriola_lalandi_dorsalis
ENSAMXG00000021495	arl13a	95	65.301	ENSSPAG00000009109	arl13a	87	75.107	Stegastes_partitus
ENSAMXG00000021495	arl13a	98	54.589	ENSXCOG00000016270	arl13a	99	55.556	Xiphophorus_couchianus
ENSAMXG00000021495	arl13a	98	58.894	ENSXMAG00000013485	arl13a	99	55.904	Xiphophorus_maculatus