EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000021555 (Gene tree)
Gene ID: 103022346
Gene Symbol: si:dkey-10o6.2
Alias: -
Full Name: UPF0676 protein C1494.01-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 2915 bases
Position: chr5:26547931-26550845
Accession: 103022346
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000022198	2OG-FeII_Oxy	PF03171.20	3.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000022198	-	991	XM_015605014	ENSAMXP00000022198	310 (aa)	XP_015460500	W5LQA1

Gene Model

Click here to download ENSAMXG00000021555's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000021555's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000021555	si:dkey-10o6.2	83	66.409	ENSAPOG00000011678	si:dkey-10o6.2	90	66.409	Acanthochromis_polyacanthus
ENSAMXG00000021555	si:dkey-10o6.2	99	62.460	ENSACIG00000011675	-	99	62.460	Amphilophus_citrinellus
ENSAMXG00000021555	si:dkey-10o6.2	96	63.455	ENSACIG00000024115	si:dkey-10o6.2	95	63.455	Amphilophus_citrinellus
ENSAMXG00000021555	si:dkey-10o6.2	99	65.484	ENSAOCG00000013068	si:dkey-10o6.2	99	65.484	Amphiprion_ocellaris
ENSAMXG00000021555	si:dkey-10o6.2	98	65.472	ENSAPEG00000011246	si:dkey-10o6.2	99	65.472	Amphiprion_percula
ENSAMXG00000021555	si:dkey-10o6.2	99	67.097	ENSATEG00000000030	si:dkey-10o6.2	99	67.097	Anabas_testudineus
ENSAMXG00000021555	si:dkey-10o6.2	99	66.129	ENSATEG00000021945	si:dkey-10o6.2	99	66.129	Anabas_testudineus
ENSAMXG00000021555	si:dkey-10o6.2	99	61.935	ENSATEG00000021952	si:dkey-10o6.2	99	61.935	Anabas_testudineus
ENSAMXG00000021555	si:dkey-10o6.2	99	63.754	ENSACLG00000023011	si:dkey-10o6.2	99	63.754	Astatotilapia_calliptera
ENSAMXG00000021555	si:dkey-10o6.2	76	43.621	ENSCING00000011926	-	100	43.621	Ciona_intestinalis
ENSAMXG00000021555	si:dkey-10o6.2	97	34.906	ENSCING00000022311	-	97	34.906	Ciona_intestinalis
ENSAMXG00000021555	si:dkey-10o6.2	90	34.859	ENSCING00000012500	-	87	34.859	Ciona_intestinalis
ENSAMXG00000021555	si:dkey-10o6.2	91	40.138	ENSCING00000007255	-	87	40.138	Ciona_intestinalis
ENSAMXG00000021555	si:dkey-10o6.2	99	37.309	ENSCING00000016920	-	94	37.309	Ciona_intestinalis
ENSAMXG00000021555	si:dkey-10o6.2	99	37.117	ENSCSAVG00000004616	-	99	37.117	Ciona_savignyi
ENSAMXG00000021555	si:dkey-10o6.2	90	36.713	ENSCSAVG00000000201	-	87	36.713	Ciona_savignyi
ENSAMXG00000021555	si:dkey-10o6.2	77	35.918	ENSCSAVG00000001337	-	99	35.918	Ciona_savignyi
ENSAMXG00000021555	si:dkey-10o6.2	99	59.223	ENSCSEG00000000927	si:dkey-10o6.2	99	59.223	Cynoglossus_semilaevis
ENSAMXG00000021555	si:dkey-10o6.2	99	59.223	ENSCSEG00000000918	si:dkey-10o6.2	98	59.223	Cynoglossus_semilaevis
ENSAMXG00000021555	si:dkey-10o6.2	99	63.754	ENSCVAG00000015074	si:dkey-10o6.2	99	63.754	Cyprinodon_variegatus
ENSAMXG00000021555	si:dkey-10o6.2	99	67.961	ENSDARG00000074628	si:dkey-10o6.2	88	67.961	Danio_rerio
ENSAMXG00000021555	si:dkey-10o6.2	99	67.638	ENSELUG00000003488	si:dkey-10o6.2	99	67.638	Esox_lucius
ENSAMXG00000021555	si:dkey-10o6.2	99	60.645	ENSFHEG00000019035	si:dkey-10o6.2	99	60.645	Fundulus_heteroclitus
ENSAMXG00000021555	si:dkey-10o6.2	96	62.791	ENSGMOG00000018989	si:dkey-10o6.2	99	62.791	Gadus_morhua
ENSAMXG00000021555	si:dkey-10o6.2	99	63.430	ENSGAFG00000006137	si:dkey-10o6.2	99	63.430	Gambusia_affinis
ENSAMXG00000021555	si:dkey-10o6.2	99	60.372	ENSGACG00000006806	si:dkey-10o6.2	99	60.372	Gasterosteus_aculeatus
ENSAMXG00000021555	si:dkey-10o6.2	99	63.754	ENSHBUG00000008853	si:dkey-10o6.2	99	63.754	Haplochromis_burtoni
ENSAMXG00000021555	si:dkey-10o6.2	99	58.013	ENSHCOG00000017671	-	99	57.556	Hippocampus_comes
ENSAMXG00000021555	si:dkey-10o6.2	99	61.415	ENSHCOG00000017626	si:dkey-10o6.2	99	61.415	Hippocampus_comes
ENSAMXG00000021555	si:dkey-10o6.2	100	66.026	ENSIPUG00000018879	si:dkey-10o6.2	91	65.696	Ictalurus_punctatus
ENSAMXG00000021555	si:dkey-10o6.2	100	66.667	ENSIPUG00000018911	-	100	66.667	Ictalurus_punctatus
ENSAMXG00000021555	si:dkey-10o6.2	99	59.486	ENSKMAG00000006197	si:dkey-10o6.2	99	59.486	Kryptolebias_marmoratus
ENSAMXG00000021555	si:dkey-10o6.2	98	59.609	ENSLBEG00000003839	si:dkey-10o6.2	99	59.609	Labrus_bergylta
ENSAMXG00000021555	si:dkey-10o6.2	99	59.740	ENSLBEG00000003823	si:dkey-10o6.2	90	59.740	Labrus_bergylta
ENSAMXG00000021555	si:dkey-10o6.2	99	62.701	ENSMAMG00000023025	-	99	62.701	Mastacembelus_armatus
ENSAMXG00000021555	si:dkey-10o6.2	99	61.736	ENSMAMG00000023026	-	99	61.736	Mastacembelus_armatus
ENSAMXG00000021555	si:dkey-10o6.2	99	63.666	ENSMAMG00000023020	si:dkey-10o6.2	99	63.666	Mastacembelus_armatus
ENSAMXG00000021555	si:dkey-10o6.2	99	62.701	ENSMAMG00000023022	si:dkey-10o6.2	99	62.701	Mastacembelus_armatus
ENSAMXG00000021555	si:dkey-10o6.2	99	64.078	ENSMZEG00005012018	si:dkey-10o6.2	99	64.078	Maylandia_zebra
ENSAMXG00000021555	si:dkey-10o6.2	98	59.164	ENSMMOG00000020383	si:dkey-10o6.2	96	59.164	Mola_mola
ENSAMXG00000021555	si:dkey-10o6.2	99	59.936	ENSMALG00000011300	si:dkey-10o6.2	99	59.936	Monopterus_albus
ENSAMXG00000021555	si:dkey-10o6.2	99	58.576	ENSNBRG00000015840	si:dkey-10o6.2	99	58.576	Neolamprologus_brichardi
ENSAMXG00000021555	si:dkey-10o6.2	99	64.401	ENSONIG00000015572	si:dkey-10o6.2	99	64.401	Oreochromis_niloticus
ENSAMXG00000021555	si:dkey-10o6.2	99	57.929	ENSORLG00000001314	si:dkey-10o6.2	99	57.929	Oryzias_latipes
ENSAMXG00000021555	si:dkey-10o6.2	99	57.605	ENSORLG00020002660	si:dkey-10o6.2	99	57.605	Oryzias_latipes_hni
ENSAMXG00000021555	si:dkey-10o6.2	99	59.223	ENSOMEG00000003617	si:dkey-10o6.2	96	59.223	Oryzias_melastigma
ENSAMXG00000021555	si:dkey-10o6.2	98	64.052	ENSPKIG00000004183	si:dkey-10o6.2	86	64.052	Paramormyrops_kingsleyae
ENSAMXG00000021555	si:dkey-10o6.2	99	61.765	ENSPKIG00000024109	-	98	63.922	Paramormyrops_kingsleyae
ENSAMXG00000021555	si:dkey-10o6.2	98	62.745	ENSPKIG00000004206	si:dkey-10o6.2	79	62.745	Paramormyrops_kingsleyae
ENSAMXG00000021555	si:dkey-10o6.2	100	53.822	ENSPMGG00000021603	si:dkey-10o6.2	100	53.822	Periophthalmus_magnuspinnatus
ENSAMXG00000021555	si:dkey-10o6.2	99	60.645	ENSPFOG00000017244	si:dkey-10o6.2	97	61.238	Poecilia_formosa
ENSAMXG00000021555	si:dkey-10o6.2	99	60.968	ENSPLAG00000008037	si:dkey-10o6.2	99	60.968	Poecilia_latipinna
ENSAMXG00000021555	si:dkey-10o6.2	70	65.753	ENSPMEG00000020748	si:dkey-10o6.2	96	65.888	Poecilia_mexicana
ENSAMXG00000021555	si:dkey-10o6.2	99	62.013	ENSPREG00000005108	si:dkey-10o6.2	99	62.013	Poecilia_reticulata
ENSAMXG00000021555	si:dkey-10o6.2	99	63.107	ENSPNYG00000010698	si:dkey-10o6.2	99	63.107	Pundamilia_nyererei
ENSAMXG00000021555	si:dkey-10o6.2	99	67.846	ENSPNAG00000014123	si:dkey-10o6.2	97	67.846	Pygocentrus_nattereri
ENSAMXG00000021555	si:dkey-10o6.2	81	66.535	ENSPNAG00000014485	-	77	66.535	Pygocentrus_nattereri
ENSAMXG00000021555	si:dkey-10o6.2	94	64.626	ENSSFOG00015015345	si:dkey-10o6.2	95	64.626	Scleropages_formosus
ENSAMXG00000021555	si:dkey-10o6.2	99	66.019	ENSSMAG00000019016	si:dkey-10o6.2	99	66.019	Scophthalmus_maximus
ENSAMXG00000021555	si:dkey-10o6.2	99	66.452	ENSSDUG00000000943	si:dkey-10o6.2	99	66.452	Seriola_dumerili
ENSAMXG00000021555	si:dkey-10o6.2	99	66.129	ENSSLDG00000003462	si:dkey-10o6.2	99	66.129	Seriola_lalandi_dorsalis
ENSAMXG00000021555	si:dkey-10o6.2	98	66.234	ENSSPAG00000020962	si:dkey-10o6.2	99	66.234	Stegastes_partitus
ENSAMXG00000021555	si:dkey-10o6.2	99	57.097	ENSTRUG00000019532	si:dkey-10o6.2	99	57.097	Takifugu_rubripes
ENSAMXG00000021555	si:dkey-10o6.2	99	62.903	ENSXCOG00000000855	si:dkey-10o6.2	99	62.903	Xiphophorus_couchianus
ENSAMXG00000021555	si:dkey-10o6.2	99	63.107	ENSXMAG00000012432	si:dkey-10o6.2	99	63.107	Xiphophorus_maculatus