EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000021637 (Gene tree)
Gene ID: 103033812
Gene Symbol: cherp
Alias: fc83d01|ik:tdsubc_2h12|tdsubc_2h12|wu:fc83d01|xx:tdsubc_2h12|zgc:55518
Full Name: calcium homeostasis endoplasmic reticulum protein
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 18983 bases
Position: chr5:25028788-25047770
Accession: 103033812
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000035624	Surp	PF01805.20	9.4e-18	1	1
ENSAMXP00000022285	Surp	PF01805.20	9.6e-18	1	1
ENSAMXP00000035624	G-patch	PF01585.23	1.4e-11	1	1
ENSAMXP00000022285	G-patch	PF01585.23	1.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000048227	-	7876	XM_007246192	ENSAMXP00000035624	975 (aa)	XP_007246254	-
ENSAMXT00000022285	-	7912	XM_007246193	ENSAMXP00000022285	987 (aa)	XP_007246255	W5LQI8

Gene Model

Click here to download ENSAMXG00000021637's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000021637's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000021637	cherp	93	67.508	ENSG00000085872	CHERP	99	67.759	Homo_sapiens
ENSAMXG00000021637	cherp	58	67.938	ENSAPOG00000009646	cherp	98	68.348	Acanthochromis_polyacanthus
ENSAMXG00000021637	cherp	74	69.652	ENSAMEG00000010048	CHERP	79	69.705	Ailuropoda_melanoleuca
ENSAMXG00000021637	cherp	94	70.745	ENSAOCG00000017846	cherp	79	73.377	Amphiprion_ocellaris
ENSAMXG00000021637	cherp	94	70.820	ENSAPEG00000021128	cherp	96	67.573	Amphiprion_percula
ENSAMXG00000021637	cherp	94	71.688	ENSATEG00000006341	cherp	99	71.718	Anabas_testudineus
ENSAMXG00000021637	cherp	72	67.473	ENSAPLG00000010773	CHERP	99	66.164	Anas_platyrhynchos
ENSAMXG00000021637	cherp	93	66.736	ENSANAG00000024284	CHERP	99	66.876	Aotus_nancymaae
ENSAMXG00000021637	cherp	94	72.068	ENSACLG00000020053	cherp	79	74.900	Astatotilapia_calliptera
ENSAMXG00000021637	cherp	93	68.349	ENSBTAG00000005289	CHERP	99	68.288	Bos_taurus
ENSAMXG00000021637	cherp	93	66.840	ENSCJAG00000040462	CHERP	99	66.876	Callithrix_jacchus
ENSAMXG00000021637	cherp	94	67.330	ENSCAFG00000015671	CHERP	99	67.865	Canis_familiaris
ENSAMXG00000021637	cherp	80	87.500	ENSCAFG00020009941	CHERP	93	78.218	Canis_lupus_dingo
ENSAMXG00000021637	cherp	82	82.979	ENSCHIG00000013765	CHERP	96	82.979	Capra_hircus
ENSAMXG00000021637	cherp	84	63.201	ENSCAPG00000000910	CHERP	68	69.382	Cavia_aperea
ENSAMXG00000021637	cherp	93	67.752	ENSCPOG00000019949	CHERP	99	67.752	Cavia_porcellus
ENSAMXG00000021637	cherp	93	66.736	ENSCCAG00000031534	CHERP	99	66.876	Cebus_capucinus
ENSAMXG00000021637	cherp	93	67.398	ENSCATG00000031409	CHERP	99	66.876	Cercocebus_atys
ENSAMXG00000021637	cherp	83	67.836	ENSCLAG00000005484	CHERP	94	67.447	Chinchilla_lanigera
ENSAMXG00000021637	cherp	93	68.076	ENSCSAG00000005740	CHERP	99	67.865	Chlorocebus_sabaeus
ENSAMXG00000021637	cherp	94	67.194	ENSCPBG00000014970	CHERP	100	67.265	Chrysemys_picta_bellii
ENSAMXG00000021637	cherp	63	49.470	ENSCING00000004814	-	53	73.810	Ciona_intestinalis
ENSAMXG00000021637	cherp	93	68.288	ENSCANG00000032053	CHERP	99	67.865	Colobus_angolensis_palliatus
ENSAMXG00000021637	cherp	93	67.150	ENSCGRG00001023316	Cherp	99	67.083	Cricetulus_griseus_chok1gshd
ENSAMXG00000021637	cherp	93	67.722	ENSCGRG00000015901	Cherp	99	68.047	Cricetulus_griseus_crigri
ENSAMXG00000021637	cherp	75	75.099	ENSCSEG00000019700	cherp	100	71.637	Cynoglossus_semilaevis
ENSAMXG00000021637	cherp	79	67.547	ENSCVAG00000003622	cherp	93	71.831	Cyprinodon_variegatus
ENSAMXG00000021637	cherp	94	79.233	ENSDARG00000021812	cherp	100	84.825	Danio_rerio
ENSAMXG00000021637	cherp	92	68.382	ENSDORG00000027623	Cherp	100	68.026	Dipodomys_ordii
ENSAMXG00000021637	cherp	57	60.938	FBgn0261872	scaf6	53	55.696	Drosophila_melanogaster
ENSAMXG00000021637	cherp	79	74.779	ENSETEG00000019543	CHERP	83	74.554	Echinops_telfairi
ENSAMXG00000021637	cherp	93	68.076	ENSEASG00005000428	CHERP	92	67.970	Equus_asinus_asinus
ENSAMXG00000021637	cherp	93	68.182	ENSECAG00000012713	CHERP	99	67.865	Equus_caballus
ENSAMXG00000021637	cherp	93	74.197	ENSELUG00000023026	cherp	79	76.685	Esox_lucius
ENSAMXG00000021637	cherp	93	67.362	ENSFCAG00000013172	CHERP	99	66.980	Felis_catus
ENSAMXG00000021637	cherp	75	68.701	ENSFALG00000013410	CHERP	86	66.493	Ficedula_albicollis
ENSAMXG00000021637	cherp	74	64.191	ENSFDAG00000015981	CHERP	100	60.870	Fukomys_damarensis
ENSAMXG00000021637	cherp	94	63.578	ENSFHEG00000009720	cherp	79	66.166	Fundulus_heteroclitus
ENSAMXG00000021637	cherp	74	73.271	ENSGMOG00000008654	cherp	99	70.160	Gadus_morhua
ENSAMXG00000021637	cherp	75	69.761	ENSGALG00000003824	CHERP	88	67.656	Gallus_gallus
ENSAMXG00000021637	cherp	94	69.758	ENSGACG00000002053	cherp	99	68.148	Gasterosteus_aculeatus
ENSAMXG00000021637	cherp	94	66.702	ENSGAGG00000014208	CHERP	100	66.843	Gopherus_agassizii
ENSAMXG00000021637	cherp	83	56.893	ENSGGOG00000016348	CHERP	95	56.155	Gorilla_gorilla
ENSAMXG00000021637	cherp	94	71.962	ENSHBUG00000007405	cherp	79	74.768	Haplochromis_burtoni
ENSAMXG00000021637	cherp	93	68.544	ENSHGLG00000002993	CHERP	99	68.259	Heterocephalus_glaber_female
ENSAMXG00000021637	cherp	75	71.771	ENSHCOG00000007691	cherp	100	69.719	Hippocampus_comes
ENSAMXG00000021637	cherp	94	88.470	ENSIPUG00000025008	cherp	100	87.911	Ictalurus_punctatus
ENSAMXG00000021637	cherp	93	67.407	ENSSTOG00000012089	CHERP	99	67.910	Ictidomys_tridecemlineatus
ENSAMXG00000021637	cherp	75	69.701	ENSJJAG00000017982	Cherp	81	69.685	Jaculus_jaculus
ENSAMXG00000021637	cherp	94	70.520	ENSKMAG00000009101	cherp	100	69.958	Kryptolebias_marmoratus
ENSAMXG00000021637	cherp	80	71.910	ENSLBEG00000007586	cherp	91	72.409	Labrus_bergylta
ENSAMXG00000021637	cherp	75	68.710	ENSLACG00000018221	CHERP	100	65.676	Latimeria_chalumnae
ENSAMXG00000021637	cherp	94	75.786	ENSLOCG00000003654	cherp	100	75.551	Lepisosteus_oculatus
ENSAMXG00000021637	cherp	93	68.191	ENSLAFG00000009096	CHERP	100	67.876	Loxodonta_africana
ENSAMXG00000021637	cherp	93	67.189	ENSMFAG00000033267	CHERP	99	66.876	Macaca_fascicularis
ENSAMXG00000021637	cherp	93	65.726	ENSMMUG00000012958	CHERP	82	67.788	Macaca_mulatta
ENSAMXG00000021637	cherp	93	67.189	ENSMNEG00000004125	CHERP	99	66.876	Macaca_nemestrina
ENSAMXG00000021637	cherp	79	71.588	ENSMLEG00000044337	CHERP	99	71.588	Mandrillus_leucophaeus
ENSAMXG00000021637	cherp	94	71.109	ENSMAMG00000022269	cherp	100	71.444	Mastacembelus_armatus
ENSAMXG00000021637	cherp	94	71.962	ENSMZEG00005018014	cherp	79	74.768	Maylandia_zebra
ENSAMXG00000021637	cherp	65	71.341	ENSMGAG00000005571	CHERP	93	67.943	Meleagris_gallopavo
ENSAMXG00000021637	cherp	93	67.607	ENSMAUG00000015856	Cherp	99	67.294	Mesocricetus_auratus
ENSAMXG00000021637	cherp	94	68.382	ENSMICG00000004577	CHERP	100	68.067	Microcebus_murinus
ENSAMXG00000021637	cherp	93	67.752	ENSMOCG00000014697	Cherp	99	68.110	Microtus_ochrogaster
ENSAMXG00000021637	cherp	96	70.951	ENSMMOG00000008525	cherp	77	72.483	Mola_mola
ENSAMXG00000021637	cherp	93	66.736	ENSMODG00000014938	CHERP	100	66.459	Monodelphis_domestica
ENSAMXG00000021637	cherp	94	69.958	ENSMALG00000020688	cherp	79	72.715	Monopterus_albus
ENSAMXG00000021637	cherp	93	67.537	MGP_CAROLIEiJ_G0031220	Cherp	99	67.471	Mus_caroli
ENSAMXG00000021637	cherp	93	66.493	ENSMUSG00000052488	Cherp	99	67.155	Mus_musculus
ENSAMXG00000021637	cherp	93	67.752	MGP_PahariEiJ_G0021685	Cherp	99	67.582	Mus_pahari
ENSAMXG00000021637	cherp	93	67.573	MGP_SPRETEiJ_G0032341	Cherp	99	67.613	Mus_spretus
ENSAMXG00000021637	cherp	74	69.503	ENSMPUG00000016023	CHERP	77	69.291	Mustela_putorius_furo
ENSAMXG00000021637	cherp	93	63.224	ENSMLUG00000013881	CHERP	99	63.541	Myotis_lucifugus
ENSAMXG00000021637	cherp	93	66.837	ENSNGAG00000023323	Cherp	99	67.500	Nannospalax_galili
ENSAMXG00000021637	cherp	94	68.644	ENSNBRG00000001914	cherp	81	73.396	Neolamprologus_brichardi
ENSAMXG00000021637	cherp	93	68.076	ENSNLEG00000005536	CHERP	99	67.865	Nomascus_leucogenys
ENSAMXG00000021637	cherp	86	78.644	ENSMEUG00000010840	CHERP	91	77.740	Notamacropus_eugenii
ENSAMXG00000021637	cherp	74	69.617	ENSODEG00000001528	CHERP	81	69.415	Octodon_degus
ENSAMXG00000021637	cherp	94	71.504	ENSONIG00000007686	cherp	79	74.468	Oreochromis_niloticus
ENSAMXG00000021637	cherp	94	69.584	ENSORLG00000000138	cherp	100	70.181	Oryzias_latipes
ENSAMXG00000021637	cherp	94	69.157	ENSORLG00020013142	cherp	100	69.968	Oryzias_latipes_hni
ENSAMXG00000021637	cherp	94	69.691	ENSORLG00015008911	cherp	100	70.181	Oryzias_latipes_hsok
ENSAMXG00000021637	cherp	94	69.742	ENSOMEG00000016947	cherp	99	70.450	Oryzias_melastigma
ENSAMXG00000021637	cherp	93	66.457	ENSOGAG00000005834	CHERP	99	66.807	Otolemur_garnettii
ENSAMXG00000021637	cherp	75	61.488	ENSOARG00000018876	CHERP	78	61.528	Ovis_aries
ENSAMXG00000021637	cherp	93	66.840	ENSPPAG00000029195	CHERP	99	66.771	Pan_paniscus
ENSAMXG00000021637	cherp	93	67.362	ENSPPRG00000003275	CHERP	99	66.980	Panthera_pardus
ENSAMXG00000021637	cherp	93	69.372	ENSPTIG00000019778	CHERP	99	71.698	Panthera_tigris_altaica
ENSAMXG00000021637	cherp	93	67.718	ENSPTRG00000010647	CHERP	99	67.759	Pan_troglodytes
ENSAMXG00000021637	cherp	93	67.189	ENSPANG00000011698	CHERP	99	66.876	Papio_anubis
ENSAMXG00000021637	cherp	73	69.601	ENSPKIG00000000423	cherp	79	70.340	Paramormyrops_kingsleyae
ENSAMXG00000021637	cherp	93	67.439	ENSPSIG00000011974	CHERP	99	67.941	Pelodiscus_sinensis
ENSAMXG00000021637	cherp	93	66.976	ENSPEMG00000011238	Cherp	99	66.909	Peromyscus_maniculatus_bairdii
ENSAMXG00000021637	cherp	94	67.044	ENSPCIG00000019615	CHERP	96	66.770	Phascolarctos_cinereus
ENSAMXG00000021637	cherp	94	70.714	ENSPFOG00000016899	cherp	100	69.351	Poecilia_formosa
ENSAMXG00000021637	cherp	82	72.359	ENSPMEG00000002214	cherp	75	72.817	Poecilia_mexicana
ENSAMXG00000021637	cherp	93	72.000	ENSPREG00000020774	cherp	99	70.506	Poecilia_reticulata
ENSAMXG00000021637	cherp	93	66.274	ENSPPYG00000009691	CHERP	99	65.638	Pongo_abelii
ENSAMXG00000021637	cherp	93	64.209	ENSPCAG00000001337	CHERP	90	81.915	Procavia_capensis
ENSAMXG00000021637	cherp	63	85.075	ENSPCOG00000022788	CHERP	99	85.075	Propithecus_coquereli
ENSAMXG00000021637	cherp	93	63.933	ENSPVAG00000004320	CHERP	90	81.915	Pteropus_vampyrus
ENSAMXG00000021637	cherp	94	71.855	ENSPNYG00000003942	cherp	79	74.635	Pundamilia_nyererei
ENSAMXG00000021637	cherp	94	91.410	ENSPNAG00000017179	cherp	100	91.410	Pygocentrus_nattereri
ENSAMXG00000021637	cherp	93	67.537	ENSRNOG00000012323	Cherp	99	67.681	Rattus_norvegicus
ENSAMXG00000021637	cherp	93	68.360	ENSRBIG00000038621	CHERP	99	68.148	Rhinopithecus_bieti
ENSAMXG00000021637	cherp	93	67.189	ENSRROG00000040770	CHERP	99	66.876	Rhinopithecus_roxellana
ENSAMXG00000021637	cherp	93	66.944	ENSSBOG00000014492	CHERP	99	66.876	Saimiri_boliviensis_boliviensis
ENSAMXG00000021637	cherp	93	66.563	ENSSHAG00000010752	CHERP	99	65.770	Sarcophilus_harrisii
ENSAMXG00000021637	cherp	83	84.615	ENSSFOG00015008022	cherp	84	82.769	Scleropages_formosus
ENSAMXG00000021637	cherp	94	69.529	ENSSMAG00000005362	cherp	100	70.699	Scophthalmus_maximus
ENSAMXG00000021637	cherp	94	71.653	ENSSDUG00000019712	cherp	100	71.608	Seriola_dumerili
ENSAMXG00000021637	cherp	94	72.152	ENSSLDG00000012659	cherp	100	72.046	Seriola_lalandi_dorsalis
ENSAMXG00000021637	cherp	93	68.838	ENSSPUG00000008901	CHERP	99	67.241	Sphenodon_punctatus
ENSAMXG00000021637	cherp	94	71.550	ENSSPAG00000010681	cherp	79	73.775	Stegastes_partitus
ENSAMXG00000021637	cherp	93	68.460	ENSSSCG00000013860	CHERP	99	68.288	Sus_scrofa
ENSAMXG00000021637	cherp	75	68.807	ENSTGUG00000000680	CHERP	99	65.942	Taeniopygia_guttata
ENSAMXG00000021637	cherp	94	67.846	ENSTRUG00000007429	cherp	99	68.470	Takifugu_rubripes
ENSAMXG00000021637	cherp	93	68.035	ENSTNIG00000003363	cherp	79	71.198	Tetraodon_nigroviridis
ENSAMXG00000021637	cherp	83	67.188	ENSTTRG00000015006	CHERP	89	67.969	Tursiops_truncatus
ENSAMXG00000021637	cherp	73	68.097	ENSUAMG00000017295	CHERP	80	67.742	Ursus_americanus
ENSAMXG00000021637	cherp	53	71.837	ENSUMAG00000000965	CHERP	58	80.288	Ursus_maritimus
ENSAMXG00000021637	cherp	93	66.701	ENSVVUG00000016546	CHERP	90	81.915	Vulpes_vulpes