EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000024373 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: sfrs1|sfrs1b|wu:fb80g05|zgc:111894|zgc:65898|zgc:76897
Full Name: serine/arginine-rich splicing factor 1B
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 2356 bases
Position: chr14:8952223-8954578
Accession: 103041100
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000025075	RRM_1	PF00076.22	5.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000025087	-	759	XM_022675898	ENSAMXP00000025075	216 (aa)	XP_022531619	W5LQW7

Gene Model

Click here to download ENSAMXG00000024373's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000024373's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000024373	-	92	59.091	ENSAMXG00000032281	srsf9	52	59.333
ENSAMXG00000024373	-	89	75.622	ENSAMXG00000035996	srsf1a	55	80.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000024373	-	94	77.778	ENSG00000136450	SRSF1	99	96.479	Homo_sapiens
ENSAMXG00000024373	-	72	76.774	ENSAPOG00000002748	-	53	73.548	Acanthochromis_polyacanthus
ENSAMXG00000024373	-	72	75.484	ENSAPOG00000008542	-	56	78.710	Acanthochromis_polyacanthus
ENSAMXG00000024373	-	72	76.129	ENSAMEG00000002635	SRSF1	52	74.839	Ailuropoda_melanoleuca
ENSAMXG00000024373	-	72	76.774	ENSACIG00000008091	srsf1a	57	72.903	Amphilophus_citrinellus
ENSAMXG00000024373	-	72	75.309	ENSAOCG00000000337	-	56	78.710	Amphiprion_ocellaris
ENSAMXG00000024373	-	72	77.419	ENSAOCG00000010671	-	57	73.548	Amphiprion_ocellaris
ENSAMXG00000024373	-	72	75.309	ENSAPEG00000023352	-	55	78.710	Amphiprion_percula
ENSAMXG00000024373	-	72	77.419	ENSAPEG00000009915	-	57	73.548	Amphiprion_percula
ENSAMXG00000024373	-	75	73.913	ENSATEG00000021567	-	54	74.839	Anabas_testudineus
ENSAMXG00000024373	-	72	77.419	ENSATEG00000022403	-	53	73.548	Anabas_testudineus
ENSAMXG00000024373	-	94	85.990	ENSACAG00000005542	-	74	86.408	Anolis_carolinensis
ENSAMXG00000024373	-	94	77.778	ENSANAG00000020583	-	53	78.065	Aotus_nancymaae
ENSAMXG00000024373	-	94	77.778	ENSBTAG00000014766	SRSF1	54	78.065	Bos_taurus
ENSAMXG00000024373	-	72	72.903	ENSCJAG00000008111	-	59	73.548	Callithrix_jacchus
ENSAMXG00000024373	-	94	77.778	ENSCJAG00000041713	-	53	78.065	Callithrix_jacchus
ENSAMXG00000024373	-	94	77.778	ENSCAFG00000017430	SRSF1	53	78.065	Canis_familiaris
ENSAMXG00000024373	-	94	77.778	ENSCAFG00020025632	-	53	78.065	Canis_lupus_dingo
ENSAMXG00000024373	-	72	76.282	ENSCHIG00000010787	SRSF1	54	78.065	Capra_hircus
ENSAMXG00000024373	-	94	77.778	ENSTSYG00000013899	-	82	95.270	Carlito_syrichta
ENSAMXG00000024373	-	94	77.778	ENSCPOG00000032681	-	54	78.065	Cavia_porcellus
ENSAMXG00000024373	-	94	77.778	ENSCCAG00000029484	-	54	78.065	Cebus_capucinus
ENSAMXG00000024373	-	94	77.778	ENSCATG00000042294	-	86	95.270	Cercocebus_atys
ENSAMXG00000024373	-	94	77.778	ENSCLAG00000014707	-	54	78.065	Chinchilla_lanigera
ENSAMXG00000024373	-	94	77.295	ENSCSAG00000005642	-	53	77.419	Chlorocebus_sabaeus
ENSAMXG00000024373	-	72	76.282	ENSCHOG00000001899	SRSF1	54	78.065	Choloepus_hoffmanni
ENSAMXG00000024373	-	94	85.990	ENSCPBG00000009851	-	74	86.408	Chrysemys_picta_bellii
ENSAMXG00000024373	-	94	77.778	ENSCANG00000029726	-	80	95.270	Colobus_angolensis_palliatus
ENSAMXG00000024373	-	94	77.778	ENSCGRG00001000670	Srsf1	53	78.065	Cricetulus_griseus_chok1gshd
ENSAMXG00000024373	-	94	77.778	ENSCGRG00000005590	Srsf1	54	78.065	Cricetulus_griseus_crigri
ENSAMXG00000024373	-	71	69.006	ENSCSEG00000009973	-	56	80.519	Cynoglossus_semilaevis
ENSAMXG00000024373	-	72	77.987	ENSCSEG00000014272	-	54	77.419	Cynoglossus_semilaevis
ENSAMXG00000024373	-	72	77.419	ENSCVAG00000018617	-	53	74.194	Cyprinodon_variegatus
ENSAMXG00000024373	-	71	77.070	ENSCVAG00000005458	-	60	75.352	Cyprinodon_variegatus
ENSAMXG00000024373	-	72	74.096	ENSDARG00000057691	srsf1a	67	80.282	Danio_rerio
ENSAMXG00000024373	-	94	87.805	ENSDARG00000017843	srsf1b	74	88.235	Danio_rerio
ENSAMXG00000024373	-	94	77.778	ENSDNOG00000011737	-	53	78.065	Dasypus_novemcinctus
ENSAMXG00000024373	-	94	77.778	ENSDORG00000015082	Srsf1	54	78.065	Dipodomys_ordii
ENSAMXG00000024373	-	94	77.778	ENSEASG00005002922	-	53	78.065	Equus_asinus_asinus
ENSAMXG00000024373	-	72	76.282	ENSECAG00000016654	SRSF1	54	78.065	Equus_caballus
ENSAMXG00000024373	-	72	81.935	ENSELUG00000021646	srsf1a	53	81.935	Esox_lucius
ENSAMXG00000024373	-	94	77.778	ENSFCAG00000002250	-	60	76.761	Felis_catus
ENSAMXG00000024373	-	66	97.931	ENSFALG00000005062	-	57	97.931	Ficedula_albicollis
ENSAMXG00000024373	-	94	77.778	ENSFDAG00000010646	-	54	78.065	Fukomys_damarensis
ENSAMXG00000024373	-	72	77.419	ENSFHEG00000003174	srsf1a	57	74.194	Fundulus_heteroclitus
ENSAMXG00000024373	-	88	75.661	ENSGMOG00000014787	-	55	73.077	Gadus_morhua
ENSAMXG00000024373	-	94	85.990	ENSGALG00000005525	SRSF1	74	86.408	Gallus_gallus
ENSAMXG00000024373	-	72	72.258	ENSGACG00000020621	srsf1b	53	69.677	Gasterosteus_aculeatus
ENSAMXG00000024373	-	94	85.024	ENSGAGG00000022965	-	73	85.437	Gopherus_agassizii
ENSAMXG00000024373	-	94	77.778	ENSGGOG00000004386	SRSF1	86	95.270	Gorilla_gorilla
ENSAMXG00000024373	-	72	76.774	ENSHBUG00000016788	srsf1a	55	72.903	Haplochromis_burtoni
ENSAMXG00000024373	-	72	76.282	ENSHGLG00000000600	-	62	78.065	Heterocephalus_glaber_female
ENSAMXG00000024373	-	72	76.282	ENSHGLG00000000669	-	62	78.065	Heterocephalus_glaber_female
ENSAMXG00000024373	-	94	77.778	ENSHGLG00100016906	-	54	78.065	Heterocephalus_glaber_male
ENSAMXG00000024373	-	72	78.065	ENSHCOG00000018918	srsf1a	54	76.129	Hippocampus_comes
ENSAMXG00000024373	-	89	75.248	ENSIPUG00000017039	srsf1a	55	84.516	Ictalurus_punctatus
ENSAMXG00000024373	-	94	87.745	ENSIPUG00000008750	srsf1b	74	87.745	Ictalurus_punctatus
ENSAMXG00000024373	-	94	77.778	ENSSTOG00000000243	-	60	76.761	Ictidomys_tridecemlineatus
ENSAMXG00000024373	-	94	77.778	ENSJJAG00000000102	-	54	78.065	Jaculus_jaculus
ENSAMXG00000024373	-	72	78.065	ENSKMAG00000019232	srsf1a	54	78.065	Kryptolebias_marmoratus
ENSAMXG00000024373	-	72	75.472	ENSLBEG00000015294	-	55	76.774	Labrus_bergylta
ENSAMXG00000024373	-	72	78.710	ENSLBEG00000020864	-	57	74.839	Labrus_bergylta
ENSAMXG00000024373	-	72	79.355	ENSLACG00000014160	srsf1a	50	79.355	Latimeria_chalumnae
ENSAMXG00000024373	-	72	83.226	ENSLOCG00000005994	srsf1a	74	86.408	Lepisosteus_oculatus
ENSAMXG00000024373	-	72	76.282	ENSLAFG00000025743	SRSF1	54	78.065	Loxodonta_africana
ENSAMXG00000024373	-	94	77.778	ENSMFAG00000040003	-	86	95.270	Macaca_fascicularis
ENSAMXG00000024373	-	94	77.778	ENSMMUG00000004725	SRSF1	53	78.065	Macaca_mulatta
ENSAMXG00000024373	-	94	75.362	ENSMMUG00000003260	-	64	75.974	Macaca_mulatta
ENSAMXG00000024373	-	94	77.778	ENSMNEG00000027680	-	86	95.270	Macaca_nemestrina
ENSAMXG00000024373	-	94	75.362	ENSMNEG00000015983	-	50	95.349	Macaca_nemestrina
ENSAMXG00000024373	-	94	76.214	ENSMLEG00000015243	-	52	73.548	Mandrillus_leucophaeus
ENSAMXG00000024373	-	72	76.282	ENSMLEG00000040509	SRSF1	54	78.065	Mandrillus_leucophaeus
ENSAMXG00000024373	-	72	76.774	ENSMAMG00000019687	-	53	74.194	Mastacembelus_armatus
ENSAMXG00000024373	-	72	77.419	ENSMAMG00000018454	-	53	73.548	Mastacembelus_armatus
ENSAMXG00000024373	-	72	80.645	ENSMAMG00000019691	-	55	80.645	Mastacembelus_armatus
ENSAMXG00000024373	-	94	77.778	ENSMAUG00000021845	Srsf1	54	78.065	Mesocricetus_auratus
ENSAMXG00000024373	-	94	77.778	ENSMICG00000013639	-	86	95.270	Microcebus_murinus
ENSAMXG00000024373	-	94	77.778	ENSMOCG00000001996	Srsf1	54	78.065	Microtus_ochrogaster
ENSAMXG00000024373	-	72	78.710	ENSMMOG00000014354	srsf1a	57	74.839	Mola_mola
ENSAMXG00000024373	-	72	76.774	ENSMALG00000017129	-	51	72.903	Monopterus_albus
ENSAMXG00000024373	-	94	77.778	MGP_CAROLIEiJ_G0016943	Srsf1	70	95.890	Mus_caroli
ENSAMXG00000024373	-	94	77.778	ENSMUSG00000018379	Srsf1	69	95.890	Mus_musculus
ENSAMXG00000024373	-	94	77.778	MGP_PahariEiJ_G0018074	Srsf1	70	95.890	Mus_pahari
ENSAMXG00000024373	-	94	77.778	MGP_SPRETEiJ_G0017790	Srsf1	70	95.890	Mus_spretus
ENSAMXG00000024373	-	72	76.282	ENSMPUG00000015369	SRSF1	54	78.065	Mustela_putorius_furo
ENSAMXG00000024373	-	75	71.429	ENSMLUG00000023995	-	52	74.194	Myotis_lucifugus
ENSAMXG00000024373	-	72	76.282	ENSMLUG00000011040	SRSF1	54	78.065	Myotis_lucifugus
ENSAMXG00000024373	-	72	76.282	ENSNGAG00000011395	Srsf1	54	78.065	Nannospalax_galili
ENSAMXG00000024373	-	94	71.078	ENSNBRG00000008041	srsf1b	52	65.161	Neolamprologus_brichardi
ENSAMXG00000024373	-	94	77.778	ENSNLEG00000008088	-	86	95.270	Nomascus_leucogenys
ENSAMXG00000024373	-	71	76.129	ENSOPRG00000001234	-	72	77.922	Ochotona_princeps
ENSAMXG00000024373	-	94	77.778	ENSODEG00000011481	-	54	78.065	Octodon_degus
ENSAMXG00000024373	-	89	80.311	ENSONIG00000004860	-	54	80.645	Oreochromis_niloticus
ENSAMXG00000024373	-	72	76.774	ENSONIG00000013160	-	53	72.903	Oreochromis_niloticus
ENSAMXG00000024373	-	94	61.429	ENSOCUG00000010894	-	51	60.784	Oryctolagus_cuniculus
ENSAMXG00000024373	-	72	77.419	ENSORLG00000004580	srsf1a	53	73.548	Oryzias_latipes
ENSAMXG00000024373	-	72	77.419	ENSORLG00020009456	srsf1a	57	73.548	Oryzias_latipes_hni
ENSAMXG00000024373	-	72	77.419	ENSORLG00015014384	srsf1a	57	73.548	Oryzias_latipes_hsok
ENSAMXG00000024373	-	72	77.419	ENSOMEG00000004106	srsf1a	54	73.548	Oryzias_melastigma
ENSAMXG00000024373	-	86	70.430	ENSOGAG00000025950	-	54	78.065	Otolemur_garnettii
ENSAMXG00000024373	-	72	76.129	ENSOARG00000008323	SRSF1	52	74.839	Ovis_aries
ENSAMXG00000024373	-	94	77.778	ENSPPAG00000043403	-	86	95.270	Pan_paniscus
ENSAMXG00000024373	-	94	77.778	ENSPPRG00000004238	-	60	76.761	Panthera_pardus
ENSAMXG00000024373	-	94	77.778	ENSPTRG00000049077	SRSF1	86	95.270	Pan_troglodytes
ENSAMXG00000024373	-	94	77.778	ENSPANG00000022305	-	86	95.270	Papio_anubis
ENSAMXG00000024373	-	94	88.725	ENSPKIG00000012857	srsf1b	74	88.725	Paramormyrops_kingsleyae
ENSAMXG00000024373	-	72	80.000	ENSPKIG00000007204	srsf1a	57	78.710	Paramormyrops_kingsleyae
ENSAMXG00000024373	-	95	86.058	ENSPSIG00000009000	-	78	84.940	Pelodiscus_sinensis
ENSAMXG00000024373	-	90	74.112	ENSPMGG00000005467	-	55	72.258	Periophthalmus_magnuspinnatus
ENSAMXG00000024373	-	72	74.194	ENSPMGG00000013112	-	58	77.419	Periophthalmus_magnuspinnatus
ENSAMXG00000024373	-	94	77.778	ENSPEMG00000021416	Srsf1	54	78.065	Peromyscus_maniculatus_bairdii
ENSAMXG00000024373	-	72	77.070	ENSPCIG00000006076	-	54	80.000	Phascolarctos_cinereus
ENSAMXG00000024373	-	73	77.500	ENSPLAG00000008416	srsf1b	54	76.623	Poecilia_latipinna
ENSAMXG00000024373	-	73	77.500	ENSPMEG00000002388	-	54	76.623	Poecilia_mexicana
ENSAMXG00000024373	-	72	77.419	ENSPREG00000009667	srsf1a	53	74.194	Poecilia_reticulata
ENSAMXG00000024373	-	94	77.778	ENSPPYG00000008240	SRSF1	54	78.065	Pongo_abelii
ENSAMXG00000024373	-	72	76.282	ENSPCAG00000005199	SRSF1	54	78.065	Procavia_capensis
ENSAMXG00000024373	-	94	77.778	ENSPCOG00000023654	-	86	95.270	Propithecus_coquereli
ENSAMXG00000024373	-	94	86.275	ENSPNAG00000014601	srsf1b	73	86.275	Pygocentrus_nattereri
ENSAMXG00000024373	-	89	79.487	ENSPNAG00000022241	srsf1a	53	76.774	Pygocentrus_nattereri
ENSAMXG00000024373	-	72	76.282	ENSRNOG00000050323	Srsf1	54	78.065	Rattus_norvegicus
ENSAMXG00000024373	-	94	77.778	ENSRBIG00000034445	-	86	95.270	Rhinopithecus_bieti
ENSAMXG00000024373	-	94	77.778	ENSRROG00000041506	-	86	95.270	Rhinopithecus_roxellana
ENSAMXG00000024373	-	94	77.778	ENSSBOG00000025377	-	54	78.065	Saimiri_boliviensis_boliviensis
ENSAMXG00000024373	-	72	77.070	ENSSHAG00000002552	-	54	80.000	Sarcophilus_harrisii
ENSAMXG00000024373	-	94	85.922	ENSSFOG00015004800	srsf1a	74	85.922	Scleropages_formosus
ENSAMXG00000024373	-	72	74.233	ENSSMAG00000009719	-	55	78.710	Scophthalmus_maximus
ENSAMXG00000024373	-	72	78.065	ENSSMAG00000007018	-	53	74.194	Scophthalmus_maximus
ENSAMXG00000024373	-	72	78.710	ENSSDUG00000011303	-	57	74.839	Seriola_dumerili
ENSAMXG00000024373	-	95	67.317	ENSSDUG00000003929	-	56	70.513	Seriola_dumerili
ENSAMXG00000024373	-	72	78.710	ENSSLDG00000010543	-	53	74.839	Seriola_lalandi_dorsalis
ENSAMXG00000024373	-	88	64.062	ENSSLDG00000016895	-	51	71.724	Seriola_lalandi_dorsalis
ENSAMXG00000024373	-	72	63.462	ENSSLDG00000016868	-	50	67.308	Seriola_lalandi_dorsalis
ENSAMXG00000024373	-	94	85.024	ENSSPUG00000000804	-	73	85.437	Sphenodon_punctatus
ENSAMXG00000024373	-	72	73.214	ENSSPAG00000014152	-	56	82.581	Stegastes_partitus
ENSAMXG00000024373	-	72	77.419	ENSSPAG00000022562	-	54	77.419	Stegastes_partitus
ENSAMXG00000024373	-	94	77.778	ENSSSCG00000017626	-	54	78.065	Sus_scrofa
ENSAMXG00000024373	-	94	85.990	ENSTGUG00000008416	-	100	86.408	Taeniopygia_guttata
ENSAMXG00000024373	-	72	76.774	ENSTRUG00000003691	srsf1a	53	72.903	Takifugu_rubripes
ENSAMXG00000024373	-	72	76.774	ENSTNIG00000016223	srsf1a	53	72.903	Tetraodon_nigroviridis
ENSAMXG00000024373	-	71	76.129	ENSTTRG00000007310	SRSF1	72	77.922	Tursiops_truncatus
ENSAMXG00000024373	-	72	76.282	ENSUAMG00000009858	SRSF1	54	78.065	Ursus_americanus
ENSAMXG00000024373	-	94	77.778	ENSUMAG00000000455	-	53	78.065	Ursus_maritimus
ENSAMXG00000024373	-	72	75.641	ENSVPAG00000010094	SRSF1	54	77.419	Vicugna_pacos
ENSAMXG00000024373	-	94	77.778	ENSVVUG00000011882	-	53	78.065	Vulpes_vulpes
ENSAMXG00000024373	-	94	84.058	ENSXETG00000008954	srsf1	66	84.466	Xenopus_tropicalis
ENSAMXG00000024373	-	72	77.419	ENSXMAG00000011766	srsf1a	53	74.194	Xiphophorus_maculatus