EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000024525 (Gene tree)
Gene ID: 103047213
Gene Symbol: rbm25b
Alias: fi03e10|rbm25|si:ch211-105d18.5|wu:fi03e10|zgc:56208
Full Name: RNA binding motif protein 25
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 10082 bases
Position: chr3:31805425-31815506
Accession: 103047213
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000038488	RRM_1	PF00076.22	2.2e-09	1	1
ENSAMXP00000025225	RRM_1	PF00076.22	3.7e-05	1	1
ENSAMXP00000038488	PWI	PF01480.17	1e-13	1	1
ENSAMXP00000025225	PWI	PF01480.17	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000031588	-	2427	-	ENSAMXP00000038488	808 (aa)	-	-
ENSAMXT00000025241	-	2448	XM_007255487	ENSAMXP00000025225	815 (aa)	XP_007255549	W5LR04

Gene Model

Click here to download ENSAMXG00000024525's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000024525's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000024525	rbm25b	85	75.433	ENSG00000119707	RBM25	100	80.469	Homo_sapiens
ENSAMXG00000024525	rbm25b	57	74.029	ENSAPOG00000017757	rbm25a	81	76.247	Acanthochromis_polyacanthus
ENSAMXG00000024525	rbm25b	85	75.433	ENSAMEG00000016270	RBM25	81	78.136	Ailuropoda_melanoleuca
ENSAMXG00000024525	rbm25b	56	74.895	ENSACIG00000019482	rbm25a	57	74.530	Amphilophus_citrinellus
ENSAMXG00000024525	rbm25b	52	73.176	ENSACIG00000014178	rbm25b	51	71.765	Amphilophus_citrinellus
ENSAMXG00000024525	rbm25b	57	75.372	ENSAOCG00000013695	rbm25a	56	71.730	Amphiprion_ocellaris
ENSAMXG00000024525	rbm25b	100	73.747	ENSAPEG00000007514	rbm25a	57	71.730	Amphiprion_percula
ENSAMXG00000024525	rbm25b	52	76.798	ENSATEG00000020676	rbm25a	63	74.865	Anabas_testudineus
ENSAMXG00000024525	rbm25b	53	76.147	ENSAPLG00000006643	RBM25	79	77.966	Anas_platyrhynchos
ENSAMXG00000024525	rbm25b	53	73.288	ENSACAG00000016239	RBM25	81	74.740	Anolis_carolinensis
ENSAMXG00000024525	rbm25b	85	75.087	ENSANAG00000028295	RBM25	98	74.740	Aotus_nancymaae
ENSAMXG00000024525	rbm25b	61	62.978	ENSACLG00000024359	rbm25b	51	68.868	Astatotilapia_calliptera
ENSAMXG00000024525	rbm25b	88	76.201	ENSACLG00000027482	rbm25a	83	75.751	Astatotilapia_calliptera
ENSAMXG00000024525	rbm25b	85	75.433	ENSBTAG00000017177	RBM25	80	75.433	Bos_taurus
ENSAMXG00000024525	rbm25b	75	39.106	WBGene00012245	W04D2.6	56	47.788	Caenorhabditis_elegans
ENSAMXG00000024525	rbm25b	85	75.433	ENSCJAG00000014441	-	98	75.087	Callithrix_jacchus
ENSAMXG00000024525	rbm25b	85	75.433	ENSTSYG00000003024	RBM25	98	75.087	Carlito_syrichta
ENSAMXG00000024525	rbm25b	51	76.630	ENSCAPG00000005239	RBM25	80	77.348	Cavia_aperea
ENSAMXG00000024525	rbm25b	85	75.433	ENSCPOG00000002479	RBM25	80	75.433	Cavia_porcellus
ENSAMXG00000024525	rbm25b	85	75.433	ENSCATG00000039651	RBM25	98	75.087	Cercocebus_atys
ENSAMXG00000024525	rbm25b	85	75.433	ENSCLAG00000003977	RBM25	80	75.433	Chinchilla_lanigera
ENSAMXG00000024525	rbm25b	85	75.433	ENSCSAG00000012801	RBM25	80	75.433	Chlorocebus_sabaeus
ENSAMXG00000024525	rbm25b	65	84.000	ENSCHOG00000008903	RBM25	63	84.000	Choloepus_hoffmanni
ENSAMXG00000024525	rbm25b	81	75.697	ENSCPBG00000011025	RBM25	79	75.697	Chrysemys_picta_bellii
ENSAMXG00000024525	rbm25b	85	75.433	ENSCANG00000043874	RBM25	98	75.087	Colobus_angolensis_palliatus
ENSAMXG00000024525	rbm25b	100	68.732	ENSCGRG00001020817	Rbm25	90	73.585	Cricetulus_griseus_chok1gshd
ENSAMXG00000024525	rbm25b	53	74.886	ENSCGRG00000017595	Rbm25	80	74.740	Cricetulus_griseus_crigri
ENSAMXG00000024525	rbm25b	63	76.892	ENSCSEG00000020737	rbm25b	52	73.759	Cynoglossus_semilaevis
ENSAMXG00000024525	rbm25b	54	75.546	ENSCSEG00000009430	rbm25a	54	71.136	Cynoglossus_semilaevis
ENSAMXG00000024525	rbm25b	52	73.427	ENSCVAG00000003478	rbm25b	51	73.239	Cyprinodon_variegatus
ENSAMXG00000024525	rbm25b	57	67.692	ENSCVAG00000005498	rbm25a	99	72.938	Cyprinodon_variegatus
ENSAMXG00000024525	rbm25b	100	85.238	ENSDARG00000006395	rbm25b	52	86.836	Danio_rerio
ENSAMXG00000024525	rbm25b	52	66.667	ENSDARG00000039266	rbm25a	99	93.671	Danio_rerio
ENSAMXG00000024525	rbm25b	85	75.433	ENSDNOG00000004959	RBM25	80	75.433	Dasypus_novemcinctus
ENSAMXG00000024525	rbm25b	53	74.658	ENSDORG00000013247	Rbm25	80	72.554	Dipodomys_ordii
ENSAMXG00000024525	rbm25b	89	72.973	FBgn0028474	CG4119	50	64.748	Drosophila_melanogaster
ENSAMXG00000024525	rbm25b	53	74.658	ENSETEG00000015941	RBM25	80	73.031	Echinops_telfairi
ENSAMXG00000024525	rbm25b	85	74.740	ENSEEUG00000007350	RBM25	81	74.769	Erinaceus_europaeus
ENSAMXG00000024525	rbm25b	55	70.044	ENSELUG00000021847	rbm25a	65	77.959	Esox_lucius
ENSAMXG00000024525	rbm25b	85	75.433	ENSFCAG00000011716	RBM25	98	75.087	Felis_catus
ENSAMXG00000024525	rbm25b	53	74.600	ENSFALG00000005445	RBM25	80	75.087	Ficedula_albicollis
ENSAMXG00000024525	rbm25b	85	75.433	ENSFDAG00000006542	RBM25	80	75.433	Fukomys_damarensis
ENSAMXG00000024525	rbm25b	59	70.600	ENSFHEG00000003513	rbm25b	53	76.526	Fundulus_heteroclitus
ENSAMXG00000024525	rbm25b	80	74.249	ENSGMOG00000014070	rbm25a	62	80.972	Gadus_morhua
ENSAMXG00000024525	rbm25b	50	72.874	ENSGALG00000047486	-	62	81.181	Gallus_gallus
ENSAMXG00000024525	rbm25b	81	75.299	ENSGAGG00000024524	RBM25	79	75.299	Gopherus_agassizii
ENSAMXG00000024525	rbm25b	85	75.433	ENSGGOG00000002415	RBM25	98	75.087	Gorilla_gorilla
ENSAMXG00000024525	rbm25b	61	63.581	ENSHBUG00000018499	rbm25b	51	69.104	Haplochromis_burtoni
ENSAMXG00000024525	rbm25b	55	76.201	ENSHBUG00000016908	rbm25a	52	75.935	Haplochromis_burtoni
ENSAMXG00000024525	rbm25b	85	75.433	ENSHGLG00000014745	RBM25	80	75.433	Heterocephalus_glaber_female
ENSAMXG00000024525	rbm25b	53	75.286	ENSHGLG00100018236	-	94	83.243	Heterocephalus_glaber_male
ENSAMXG00000024525	rbm25b	100	69.048	ENSHCOG00000000142	rbm25b	57	70.127	Hippocampus_comes
ENSAMXG00000024525	rbm25b	87	62.899	ENSHCOG00000018433	rbm25a	68	73.767	Hippocampus_comes
ENSAMXG00000024525	rbm25b	85	75.433	ENSSTOG00000011117	RBM25	80	75.433	Ictidomys_tridecemlineatus
ENSAMXG00000024525	rbm25b	95	69.735	ENSKMAG00000016242	rbm25a	59	76.113	Kryptolebias_marmoratus
ENSAMXG00000024525	rbm25b	52	76.706	ENSKMAG00000018826	rbm25b	52	78.588	Kryptolebias_marmoratus
ENSAMXG00000024525	rbm25b	100	75.030	ENSLACG00000011845	RBM25	98	75.633	Latimeria_chalumnae
ENSAMXG00000024525	rbm25b	52	72.897	ENSLOCG00000014196	rbm25b	100	76.520	Lepisosteus_oculatus
ENSAMXG00000024525	rbm25b	85	75.433	ENSMFAG00000040040	RBM25	98	75.087	Macaca_fascicularis
ENSAMXG00000024525	rbm25b	85	75.433	ENSMMUG00000002332	RBM25	98	73.711	Macaca_mulatta
ENSAMXG00000024525	rbm25b	85	72.619	ENSMNEG00000032922	RBM25	80	72.554	Macaca_nemestrina
ENSAMXG00000024525	rbm25b	85	75.433	ENSMLEG00000035157	RBM25	98	75.087	Mandrillus_leucophaeus
ENSAMXG00000024525	rbm25b	56	71.991	ENSMAMG00000000165	rbm25a	56	70.933	Mastacembelus_armatus
ENSAMXG00000024525	rbm25b	60	69.815	ENSMAMG00000004524	rbm25b	52	78.199	Mastacembelus_armatus
ENSAMXG00000024525	rbm25b	55	76.201	ENSMZEG00005011183	rbm25a	53	75.751	Maylandia_zebra
ENSAMXG00000024525	rbm25b	61	63.380	ENSMZEG00005001453	rbm25b	51	68.868	Maylandia_zebra
ENSAMXG00000024525	rbm25b	53	76.147	ENSMGAG00000011707	RBM25	81	74.940	Meleagris_gallopavo
ENSAMXG00000024525	rbm25b	85	75.087	ENSMICG00000034082	RBM25	98	74.740	Microcebus_murinus
ENSAMXG00000024525	rbm25b	53	74.886	ENSMOCG00000001935	Rbm25	80	72.619	Microtus_ochrogaster
ENSAMXG00000024525	rbm25b	100	77.657	ENSMMOG00000015545	rbm25b	57	78.118	Mola_mola
ENSAMXG00000024525	rbm25b	52	76.722	ENSMMOG00000009065	rbm25a	51	75.534	Mola_mola
ENSAMXG00000024525	rbm25b	85	75.779	ENSMODG00000006820	RBM25	79	75.779	Monodelphis_domestica
ENSAMXG00000024525	rbm25b	57	75.625	ENSMALG00000020441	rbm25b	90	73.640	Monopterus_albus
ENSAMXG00000024525	rbm25b	53	74.886	MGP_CAROLIEiJ_G0017921	Rbm25	99	86.525	Mus_caroli
ENSAMXG00000024525	rbm25b	53	74.886	ENSMUSG00000010608	Rbm25	99	86.525	Mus_musculus
ENSAMXG00000024525	rbm25b	53	74.886	MGP_PahariEiJ_G0029677	Rbm25	99	86.525	Mus_pahari
ENSAMXG00000024525	rbm25b	53	72.603	MGP_SPRETEiJ_G0018766	-	99	86.525	Mus_spretus
ENSAMXG00000024525	rbm25b	72	73.224	ENSMPUG00000003698	RBM25	76	73.224	Mustela_putorius_furo
ENSAMXG00000024525	rbm25b	55	70.833	ENSMLUG00000015434	-	81	77.778	Myotis_lucifugus
ENSAMXG00000024525	rbm25b	54	69.438	ENSMLUG00000024167	-	82	71.479	Myotis_lucifugus
ENSAMXG00000024525	rbm25b	53	74.886	ENSNGAG00000018465	Rbm25	80	74.740	Nannospalax_galili
ENSAMXG00000024525	rbm25b	61	63.380	ENSNBRG00000022192	rbm25b	51	68.632	Neolamprologus_brichardi
ENSAMXG00000024525	rbm25b	52	77.176	ENSNBRG00000003761	rbm25a	54	76.540	Neolamprologus_brichardi
ENSAMXG00000024525	rbm25b	85	75.433	ENSNLEG00000002701	RBM25	98	75.087	Nomascus_leucogenys
ENSAMXG00000024525	rbm25b	54	82.432	ENSOPRG00000016744	-	53	82.993	Ochotona_princeps
ENSAMXG00000024525	rbm25b	85	74.740	ENSOANG00000001056	RBM25	79	74.740	Ornithorhynchus_anatinus
ENSAMXG00000024525	rbm25b	100	65.108	ENSOCUG00000013737	RBM25	80	75.087	Oryctolagus_cuniculus
ENSAMXG00000024525	rbm25b	61	69.215	ENSORLG00000011874	rbm25b	52	75.177	Oryzias_latipes
ENSAMXG00000024525	rbm25b	61	69.416	ENSORLG00020016422	rbm25b	52	75.414	Oryzias_latipes_hni
ENSAMXG00000024525	rbm25b	52	77.176	ENSORLG00015011269	rbm25b	52	75.650	Oryzias_latipes_hsok
ENSAMXG00000024525	rbm25b	53	75.057	ENSOGAG00000014986	RBM25	81	72.554	Otolemur_garnettii
ENSAMXG00000024525	rbm25b	85	75.433	ENSOARG00000000319	RBM25	80	75.433	Ovis_aries
ENSAMXG00000024525	rbm25b	85	75.433	ENSPPAG00000039402	RBM25	98	75.087	Pan_paniscus
ENSAMXG00000024525	rbm25b	85	75.433	ENSPPRG00000017374	RBM25	98	75.087	Panthera_pardus
ENSAMXG00000024525	rbm25b	85	75.433	ENSPTIG00000017309	RBM25	98	75.087	Panthera_tigris_altaica
ENSAMXG00000024525	rbm25b	85	75.433	ENSPTRG00000006509	RBM25	98	75.087	Pan_troglodytes
ENSAMXG00000024525	rbm25b	85	75.433	ENSPANG00000018212	RBM25	98	75.087	Papio_anubis
ENSAMXG00000024525	rbm25b	52	77.176	ENSPKIG00000003203	rbm25b	100	77.751	Paramormyrops_kingsleyae
ENSAMXG00000024525	rbm25b	85	75.779	ENSPSIG00000006058	RBM25	80	75.779	Pelodiscus_sinensis
ENSAMXG00000024525	rbm25b	52	62.945	ENSPMGG00000001791	rbm25a	96	62.322	Periophthalmus_magnuspinnatus
ENSAMXG00000024525	rbm25b	76	77.665	ENSPCIG00000011166	RBM25	73	79.058	Phascolarctos_cinereus
ENSAMXG00000024525	rbm25b	52	75.406	ENSPFOG00000018808	rbm25b	84	76.566	Poecilia_formosa
ENSAMXG00000024525	rbm25b	100	74.007	ENSPLAG00000018338	rbm25a	57	71.757	Poecilia_latipinna
ENSAMXG00000024525	rbm25b	52	75.406	ENSPMEG00000019161	rbm25b	84	76.566	Poecilia_mexicana
ENSAMXG00000024525	rbm25b	100	74.007	ENSPMEG00000024470	rbm25a	57	71.757	Poecilia_mexicana
ENSAMXG00000024525	rbm25b	100	72.485	ENSPREG00000009228	rbm25a	60	78.629	Poecilia_reticulata
ENSAMXG00000024525	rbm25b	52	75.289	ENSPREG00000008522	rbm25b	84	75.982	Poecilia_reticulata
ENSAMXG00000024525	rbm25b	81	77.447	ENSPCAG00000006226	RBM25	75	76.623	Procavia_capensis
ENSAMXG00000024525	rbm25b	85	75.433	ENSPCOG00000023107	RBM25	98	75.087	Propithecus_coquereli
ENSAMXG00000024525	rbm25b	85	72.619	ENSPVAG00000003931	RBM25	80	72.554	Pteropus_vampyrus
ENSAMXG00000024525	rbm25b	61	63.380	ENSPNYG00000023303	rbm25b	51	68.868	Pundamilia_nyererei
ENSAMXG00000024525	rbm25b	55	76.201	ENSPNYG00000022596	rbm25a	51	75.751	Pundamilia_nyererei
ENSAMXG00000024525	rbm25b	57	95.772	ENSPNAG00000012024	rbm25b	58	95.772	Pygocentrus_nattereri
ENSAMXG00000024525	rbm25b	53	74.658	ENSRNOG00000002871	Rbm25l1	83	74.740	Rattus_norvegicus
ENSAMXG00000024525	rbm25b	85	75.433	ENSRBIG00000039904	RBM25	98	75.087	Rhinopithecus_bieti
ENSAMXG00000024525	rbm25b	85	75.433	ENSRROG00000035556	RBM25	98	75.087	Rhinopithecus_roxellana
ENSAMXG00000024525	rbm25b	85	75.779	ENSSHAG00000012859	RBM25	80	75.779	Sarcophilus_harrisii
ENSAMXG00000024525	rbm25b	52	77.830	ENSSFOG00015007093	rbm25	100	77.229	Scleropages_formosus
ENSAMXG00000024525	rbm25b	61	66.468	ENSSMAG00000002520	rbm25b	57	69.807	Scophthalmus_maximus
ENSAMXG00000024525	rbm25b	52	78.089	ENSSMAG00000009745	rbm25a	52	74.592	Scophthalmus_maximus
ENSAMXG00000024525	rbm25b	54	76.739	ENSSDUG00000017984	rbm25a	59	74.792	Seriola_dumerili
ENSAMXG00000024525	rbm25b	52	76.798	ENSSLDG00000010342	rbm25a	52	76.168	Seriola_lalandi_dorsalis
ENSAMXG00000024525	rbm25b	55	77.996	ENSSLDG00000024573	rbm25b	95	79.405	Seriola_lalandi_dorsalis
ENSAMXG00000024525	rbm25b	85	75.433	ENSSARG00000002327	RBM25	80	75.433	Sorex_araneus
ENSAMXG00000024525	rbm25b	52	74.318	ENSSPAG00000011114	rbm25a	52	72.955	Stegastes_partitus
ENSAMXG00000024525	rbm25b	56	73.362	ENSTRUG00000003076	rbm25a	58	70.711	Takifugu_rubripes
ENSAMXG00000024525	rbm25b	91	68.903	ENSTNIG00000012222	rbm25b	77	76.247	Tetraodon_nigroviridis
ENSAMXG00000024525	rbm25b	61	79.365	ENSTBEG00000010538	-	63	78.469	Tupaia_belangeri
ENSAMXG00000024525	rbm25b	81	74.104	ENSUAMG00000007707	RBM25	100	71.552	Ursus_americanus
ENSAMXG00000024525	rbm25b	88	72.996	ENSVPAG00000009052	RBM25	73	76.419	Vicugna_pacos
ENSAMXG00000024525	rbm25b	85	75.433	ENSVVUG00000004426	RBM25	78	75.433	Vulpes_vulpes
ENSAMXG00000024525	rbm25b	95	65.602	ENSXETG00000021857	rbm25	81	75.000	Xenopus_tropicalis
ENSAMXG00000024525	rbm25b	100	69.737	ENSXMAG00000009077	RBM25	61	78.226	Xiphophorus_maculatus
ENSAMXG00000024525	rbm25b	100	72.459	ENSXMAG00000017290	rbm25b	84	75.806	Xiphophorus_maculatus