EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000024703 (Gene tree)
Gene ID: 103022861
Gene Symbol: poc1a
Alias: wdr51a|wu:fl82d01|zgc:56055
Full Name: POC1 centriolar protein A
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 73987 bases
Position: chr22:21747342-21821328
Accession: 103022861
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000027351	eIF2A	PF08662.11	1.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000025426	-	1080	XM_022682612	ENSAMXP00000025407	359 (aa)	XP_022538333	W5LRA2
ENSAMXT00000051850	-	1074	-	ENSAMXP00000027351	357 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000024703's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000024703's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000024703	poc1a	82	34.630	ENSAMXG00000031828	wdr5	93	34.630
ENSAMXG00000024703	poc1a	80	33.557	ENSAMXG00000008741	wdr61	95	33.557
ENSAMXG00000024703	poc1a	81	30.328	ENSAMXG00000006756	prpf4	59	30.328
ENSAMXG00000024703	poc1a	82	30.303	ENSAMXG00000042589	tbl3	68	30.303
ENSAMXG00000024703	poc1a	81	34.171	ENSAMXG00000007741	-	90	34.171

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000024703	poc1a	97	72.012	ENSG00000164087	POC1A	96	72.012	Homo_sapiens
ENSAMXG00000024703	poc1a	85	80.667	ENSAPOG00000002677	POC1A	77	83.099	Acanthochromis_polyacanthus
ENSAMXG00000024703	poc1a	85	77.333	ENSAMEG00000009136	POC1A	74	77.333	Ailuropoda_melanoleuca
ENSAMXG00000024703	poc1a	85	79.333	ENSACIG00000018288	poc1a	68	79.333	Amphilophus_citrinellus
ENSAMXG00000024703	poc1a	85	80.667	ENSAOCG00000001066	POC1A	74	80.667	Amphiprion_ocellaris
ENSAMXG00000024703	poc1a	92	76.147	ENSAPEG00000005795	poc1a	94	76.147	Amphiprion_percula
ENSAMXG00000024703	poc1a	85	84.718	ENSAPLG00000007756	POC1A	75	84.718	Anas_platyrhynchos
ENSAMXG00000024703	poc1a	89	74.921	ENSANAG00000030897	POC1A	97	69.143	Aotus_nancymaae
ENSAMXG00000024703	poc1a	98	70.442	ENSACLG00000017869	POC1A	96	70.442	Astatotilapia_calliptera
ENSAMXG00000024703	poc1a	85	80.727	ENSBTAG00000001471	POC1A	77	80.071	Bos_taurus
ENSAMXG00000024703	poc1a	89	74.921	ENSCJAG00000005972	POC1A	96	70.554	Callithrix_jacchus
ENSAMXG00000024703	poc1a	84	71.000	ENSCAFG00020022379	POC1A	73	71.000	Canis_lupus_dingo
ENSAMXG00000024703	poc1a	85	79.264	ENSCHIG00000002571	POC1A	74	79.264	Capra_hircus
ENSAMXG00000024703	poc1a	89	75.556	ENSTSYG00000008302	POC1A	96	71.137	Carlito_syrichta
ENSAMXG00000024703	poc1a	82	77.567	ENSCAPG00000016201	POC1A	69	77.567	Cavia_aperea
ENSAMXG00000024703	poc1a	93	70.845	ENSCPOG00000006740	POC1A	98	70.845	Cavia_porcellus
ENSAMXG00000024703	poc1a	89	75.238	ENSCCAG00000023380	POC1A	97	69.429	Cebus_capucinus
ENSAMXG00000024703	poc1a	89	74.921	ENSCATG00000021822	POC1A	76	79.004	Cercocebus_atys
ENSAMXG00000024703	poc1a	92	64.723	ENSCLAG00000010593	POC1A	96	64.723	Chinchilla_lanigera
ENSAMXG00000024703	poc1a	89	76.897	ENSCSAG00000013862	POC1A	79	76.897	Chlorocebus_sabaeus
ENSAMXG00000024703	poc1a	79	86.397	ENSCPBG00000016728	POC1A	98	86.397	Chrysemys_picta_bellii
ENSAMXG00000024703	poc1a	93	66.873	ENSCSAVG00000008477	-	99	66.873	Ciona_savignyi
ENSAMXG00000024703	poc1a	89	77.241	ENSCANG00000033064	POC1A	96	71.137	Colobus_angolensis_palliatus
ENSAMXG00000024703	poc1a	93	71.261	ENSCGRG00001007357	Poc1a	97	71.261	Cricetulus_griseus_chok1gshd
ENSAMXG00000024703	poc1a	82	79.433	ENSCSEG00000010287	POC1A	70	79.433	Cynoglossus_semilaevis
ENSAMXG00000024703	poc1a	82	78.966	ENSCVAG00000015594	POC1A	69	78.947	Cyprinodon_variegatus
ENSAMXG00000024703	poc1a	64	63.946	ENSEBUG00000008246	POC1A	55	63.946	Eptatretus_burgeri
ENSAMXG00000024703	poc1a	81	74.394	ENSEBUG00000002614	POC1A	58	74.394	Eptatretus_burgeri
ENSAMXG00000024703	poc1a	80	66.078	ENSEBUG00000008013	poc1a	85	66.078	Eptatretus_burgeri
ENSAMXG00000024703	poc1a	85	84.667	ENSELUG00000015504	poc1a	81	79.365	Esox_lucius
ENSAMXG00000024703	poc1a	93	71.137	ENSFCAG00000015704	POC1A	96	71.137	Felis_catus
ENSAMXG00000024703	poc1a	85	82.609	ENSFALG00000008922	POC1A	74	82.609	Ficedula_albicollis
ENSAMXG00000024703	poc1a	93	70.845	ENSFDAG00000011606	POC1A	98	70.845	Fukomys_damarensis
ENSAMXG00000024703	poc1a	82	78.966	ENSFHEG00000015504	POC1A	75	79.787	Fundulus_heteroclitus
ENSAMXG00000024703	poc1a	98	72.238	ENSGALG00000034572	-	98	74.118	Gallus_gallus
ENSAMXG00000024703	poc1a	85	77.667	ENSGACG00000007015	poc1a	72	77.667	Gasterosteus_aculeatus
ENSAMXG00000024703	poc1a	85	83.278	ENSGAGG00000014637	POC1A	74	83.278	Gopherus_agassizii
ENSAMXG00000024703	poc1a	97	72.012	ENSGGOG00000006652	POC1A	96	72.012	Gorilla_gorilla
ENSAMXG00000024703	poc1a	89	74.286	ENSHGLG00000013436	POC1A	97	70.262	Heterocephalus_glaber_female
ENSAMXG00000024703	poc1a	89	74.286	ENSHGLG00100003479	POC1A	78	74.286	Heterocephalus_glaber_male
ENSAMXG00000024703	poc1a	85	81.271	ENSIPUG00000001227	POC1A	76	82.746	Ictalurus_punctatus
ENSAMXG00000024703	poc1a	89	74.921	ENSSTOG00000002638	POC1A	97	70.845	Ictidomys_tridecemlineatus
ENSAMXG00000024703	poc1a	93	70.845	ENSJJAG00000018739	Poc1a	96	70.845	Jaculus_jaculus
ENSAMXG00000024703	poc1a	85	80.000	ENSLBEG00000016119	POC1A	64	80.000	Labrus_bergylta
ENSAMXG00000024703	poc1a	84	84.615	ENSLACG00000018788	POC1A	86	84.615	Latimeria_chalumnae
ENSAMXG00000024703	poc1a	84	88.333	ENSLOCG00000013801	poc1a	72	88.333	Lepisosteus_oculatus
ENSAMXG00000024703	poc1a	84	70.432	ENSLAFG00000028434	POC1A	98	72.355	Loxodonta_africana
ENSAMXG00000024703	poc1a	89	76.552	ENSMFAG00000001970	POC1A	79	76.552	Macaca_fascicularis
ENSAMXG00000024703	poc1a	89	74.921	ENSMMUG00000012485	POC1A	77	74.921	Macaca_mulatta
ENSAMXG00000024703	poc1a	89	76.552	ENSMNEG00000042811	POC1A	79	76.552	Macaca_nemestrina
ENSAMXG00000024703	poc1a	89	76.552	ENSMLEG00000039574	POC1A	96	70.554	Mandrillus_leucophaeus
ENSAMXG00000024703	poc1a	85	80.919	ENSMAMG00000014233	POC1A	64	80.919	Mastacembelus_armatus
ENSAMXG00000024703	poc1a	85	80.000	ENSMZEG00005013503	POC1A	64	80.000	Maylandia_zebra
ENSAMXG00000024703	poc1a	85	81.063	ENSMGAG00000001628	POC1A	68	81.063	Meleagris_gallopavo
ENSAMXG00000024703	poc1a	89	76.115	ENSMAUG00000017403	Poc1a	96	71.930	Mesocricetus_auratus
ENSAMXG00000024703	poc1a	93	72.886	ENSMICG00000002709	POC1A	96	72.886	Microcebus_murinus
ENSAMXG00000024703	poc1a	89	76.115	ENSMOCG00000003396	Poc1a	85	76.115	Microtus_ochrogaster
ENSAMXG00000024703	poc1a	81	81.139	ENSMMOG00000010427	poc1a	70	81.139	Mola_mola
ENSAMXG00000024703	poc1a	84	81.940	ENSMODG00000011717	POC1A	77	81.940	Monodelphis_domestica
ENSAMXG00000024703	poc1a	92	73.099	ENSMALG00000009054	poc1a	92	73.099	Monopterus_albus
ENSAMXG00000024703	poc1a	97	72.222	MGP_CAROLIEiJ_G0032617	Poc1a	96	72.222	Mus_caroli
ENSAMXG00000024703	poc1a	97	71.930	ENSMUSG00000023345	Poc1a	91	80.882	Mus_musculus
ENSAMXG00000024703	poc1a	97	71.930	MGP_PahariEiJ_G0015485	Poc1a	96	71.930	Mus_pahari
ENSAMXG00000024703	poc1a	97	71.930	MGP_SPRETEiJ_G0033763	Poc1a	96	71.930	Mus_spretus
ENSAMXG00000024703	poc1a	85	77.667	ENSMPUG00000011723	POC1A	74	77.667	Mustela_putorius_furo
ENSAMXG00000024703	poc1a	85	78.595	ENSMLUG00000015092	POC1A	68	78.595	Myotis_lucifugus
ENSAMXG00000024703	poc1a	89	77.070	ENSNGAG00000005212	Poc1a	77	77.070	Nannospalax_galili
ENSAMXG00000024703	poc1a	85	80.000	ENSNBRG00000022135	poc1a	71	80.000	Neolamprologus_brichardi
ENSAMXG00000024703	poc1a	97	71.137	ENSNLEG00000007084	POC1A	96	71.137	Nomascus_leucogenys
ENSAMXG00000024703	poc1a	82	72.598	ENSMEUG00000007715	-	70	72.598	Notamacropus_eugenii
ENSAMXG00000024703	poc1a	85	77.698	ENSOPRG00000008831	POC1A	68	77.698	Ochotona_princeps
ENSAMXG00000024703	poc1a	85	77.333	ENSODEG00000018290	POC1A	75	77.333	Octodon_degus
ENSAMXG00000024703	poc1a	85	79.000	ENSONIG00000014378	POC1A	64	79.000	Oreochromis_niloticus
ENSAMXG00000024703	poc1a	85	78.545	ENSOCUG00000002080	POC1A	75	78.545	Oryctolagus_cuniculus
ENSAMXG00000024703	poc1a	83	78.966	ENSOMEG00000019834	POC1A	65	78.694	Oryzias_melastigma
ENSAMXG00000024703	poc1a	89	76.825	ENSOGAG00000032245	POC1A	78	76.825	Otolemur_garnettii
ENSAMXG00000024703	poc1a	85	79.264	ENSOARG00000006352	POC1A	74	79.264	Ovis_aries
ENSAMXG00000024703	poc1a	97	72.012	ENSPPAG00000043583	POC1A	96	72.012	Pan_paniscus
ENSAMXG00000024703	poc1a	93	71.137	ENSPPRG00000003365	POC1A	96	71.137	Panthera_pardus
ENSAMXG00000024703	poc1a	85	79.636	ENSPTIG00000005388	POC1A	75	79.636	Panthera_tigris_altaica
ENSAMXG00000024703	poc1a	97	72.012	ENSPTRG00000014989	POC1A	96	72.012	Pan_troglodytes
ENSAMXG00000024703	poc1a	84	83.612	ENSPSIG00000014809	POC1A	93	83.612	Pelodiscus_sinensis
ENSAMXG00000024703	poc1a	83	78.231	ENSPMGG00000005356	poc1a	74	78.231	Periophthalmus_magnuspinnatus
ENSAMXG00000024703	poc1a	89	76.115	ENSPEMG00000024131	Poc1a	92	78.788	Peromyscus_maniculatus_bairdii
ENSAMXG00000024703	poc1a	85	82.274	ENSPMAG00000000333	poc1a	64	82.274	Petromyzon_marinus
ENSAMXG00000024703	poc1a	84	81.605	ENSPCIG00000018160	POC1A	79	81.605	Phascolarctos_cinereus
ENSAMXG00000024703	poc1a	89	75.238	ENSPPYG00000013816	POC1A	78	75.238	Pongo_abelii
ENSAMXG00000024703	poc1a	82	79.381	ENSPCAG00000002118	POC1A	72	79.381	Procavia_capensis
ENSAMXG00000024703	poc1a	89	78.966	ENSPCOG00000012625	POC1A	96	72.303	Propithecus_coquereli
ENSAMXG00000024703	poc1a	85	68.562	ENSPVAG00000012480	POC1A	73	68.562	Pteropus_vampyrus
ENSAMXG00000024703	poc1a	85	80.000	ENSPNYG00000019517	poc1a	74	80.000	Pundamilia_nyererei
ENSAMXG00000024703	poc1a	85	92.308	ENSPNAG00000007556	POC1A	68	92.308	Pygocentrus_nattereri
ENSAMXG00000024703	poc1a	83	80.669	ENSRNOG00000037295	Poc1a	73	80.669	Rattus_norvegicus
ENSAMXG00000024703	poc1a	89	77.241	ENSRBIG00000031748	POC1A	96	71.137	Rhinopithecus_bieti
ENSAMXG00000024703	poc1a	89	76.897	ENSRROG00000044472	POC1A	96	70.845	Rhinopithecus_roxellana
ENSAMXG00000024703	poc1a	89	77.241	ENSSBOG00000027902	POC1A	97	69.429	Saimiri_boliviensis_boliviensis
ENSAMXG00000024703	poc1a	83	82.246	ENSSMAG00000013505	POC1A	70	82.686	Scophthalmus_maximus
ENSAMXG00000024703	poc1a	85	80.667	ENSSDUG00000016161	POC1A	64	80.667	Seriola_dumerili
ENSAMXG00000024703	poc1a	92	74.006	ENSSLDG00000003828	POC1A	93	74.006	Seriola_lalandi_dorsalis
ENSAMXG00000024703	poc1a	85	84.364	ENSSPUG00000008656	POC1A	62	84.364	Sphenodon_punctatus
ENSAMXG00000024703	poc1a	85	64.667	ENSSPAG00000020330	POC1A	69	64.667	Stegastes_partitus
ENSAMXG00000024703	poc1a	89	75.873	ENSSSCG00000011426	POC1A	78	75.873	Sus_scrofa
ENSAMXG00000024703	poc1a	83	81.229	ENSTGUG00000006036	POC1A	74	81.229	Taeniopygia_guttata
ENSAMXG00000024703	poc1a	98	67.435	ENSTRUG00000007900	POC1A	93	67.435	Takifugu_rubripes
ENSAMXG00000024703	poc1a	94	69.733	ENSTNIG00000014818	POC1A	69	69.733	Tetraodon_nigroviridis
ENSAMXG00000024703	poc1a	85	77.333	ENSTTRG00000016798	POC1A	75	77.333	Tursiops_truncatus
ENSAMXG00000024703	poc1a	85	78.909	ENSUAMG00000020816	POC1A	99	78.909	Ursus_americanus
ENSAMXG00000024703	poc1a	85	78.909	ENSUMAG00000021482	POC1A	75	78.909	Ursus_maritimus
ENSAMXG00000024703	poc1a	84	78.595	ENSXETG00000010813	poc1a	68	77.592	Xenopus_tropicalis