EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000025173 (Gene tree)
Gene ID: 103046343
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein lark-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 999 bases
Position: chr14:18704327-18705325
Accession: 103046343
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000025879	RRM_1	PF00076.22	1e-32	1	2
ENSAMXP00000025879	RRM_1	PF00076.22	1e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000025899	-	999	XM_007244497	ENSAMXP00000025879	332 (aa)	XP_007244559	W5LSH4

Gene Model

Click here to download ENSAMXG00000025173's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000025173's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000025173	-	58	39.896	ENSAMXG00000040224	rbm4.3	64	42.405

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000025173	-	59	42.051	ENSLBEG00000001025	rbm4.3	67	45.270	Labrus_bergylta
ENSAMXG00000025173	-	100	74.425	ENSPKIG00000007274	-	100	69.828	Paramormyrops_kingsleyae
ENSAMXG00000025173	-	94	36.418	ENSPKIG00000007001	rbm4.3	65	43.671	Paramormyrops_kingsleyae
ENSAMXG00000025173	-	100	93.134	ENSPNAG00000012130	-	100	92.836	Pygocentrus_nattereri