EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000025945 (Gene tree)
Gene ID: 103026022
Gene Symbol: si:dkey-17e16.10
Alias: -
Full Name: mitochondrial ribosomal protein S12
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 6864 bases
Position: chr14:5645144-5652007
Accession: 103026022
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000026650	Ribosom_S12_S23	PF00164.25	6.8e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000026671	-	635	XM_022676061	ENSAMXP00000026650	146 (aa)	XP_022531782	W5LU34

Gene Model

Click here to download ENSAMXG00000025945's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000025945's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000025945	si:dkey-17e16.10	91	60.741	ENSG00000128626	MRPS12	80	70.909	Homo_sapiens
ENSAMXG00000025945	si:dkey-17e16.10	100	73.288	ENSAPOG00000005047	si:dkey-17e16.10	100	73.288	Acanthochromis_polyacanthus
ENSAMXG00000025945	si:dkey-17e16.10	91	62.222	ENSAMEG00000008722	MRPS12	81	73.043	Ailuropoda_melanoleuca
ENSAMXG00000025945	si:dkey-17e16.10	100	72.603	ENSACIG00000016095	si:dkey-17e16.10	100	72.603	Amphilophus_citrinellus
ENSAMXG00000025945	si:dkey-17e16.10	100	71.918	ENSAOCG00000018530	si:dkey-17e16.10	100	71.918	Amphiprion_ocellaris
ENSAMXG00000025945	si:dkey-17e16.10	100	71.233	ENSAPEG00000019785	si:dkey-17e16.10	100	71.233	Amphiprion_percula
ENSAMXG00000025945	si:dkey-17e16.10	100	74.658	ENSATEG00000018924	si:dkey-17e16.10	100	74.658	Anabas_testudineus
ENSAMXG00000025945	si:dkey-17e16.10	75	79.091	ENSAPLG00000011925	-	79	79.091	Anas_platyrhynchos
ENSAMXG00000025945	si:dkey-17e16.10	75	73.394	ENSAPLG00000014350	-	73	73.394	Anas_platyrhynchos
ENSAMXG00000025945	si:dkey-17e16.10	75	79.091	ENSACAG00000003829	MRPS12	76	79.091	Anolis_carolinensis
ENSAMXG00000025945	si:dkey-17e16.10	76	71.171	ENSANAG00000033654	MRPS12	80	71.171	Aotus_nancymaae
ENSAMXG00000025945	si:dkey-17e16.10	100	72.603	ENSACLG00000013979	si:dkey-17e16.10	95	72.603	Astatotilapia_calliptera
ENSAMXG00000025945	si:dkey-17e16.10	77	75.221	ENSBTAG00000001782	MRPS12	81	75.221	Bos_taurus
ENSAMXG00000025945	si:dkey-17e16.10	95	49.324	WBGene00011391	mrps-12	55	64.368	Caenorhabditis_elegans
ENSAMXG00000025945	si:dkey-17e16.10	92	60.294	ENSCJAG00000043176	MRPS12	80	70.270	Callithrix_jacchus
ENSAMXG00000025945	si:dkey-17e16.10	92	64.706	ENSCAFG00000005623	MRPS12	81	74.783	Canis_familiaris
ENSAMXG00000025945	si:dkey-17e16.10	92	64.706	ENSCAFG00020016784	MRPS12	81	74.783	Canis_lupus_dingo
ENSAMXG00000025945	si:dkey-17e16.10	77	75.893	ENSCHIG00000013852	MRPS12	81	75.893	Capra_hircus
ENSAMXG00000025945	si:dkey-17e16.10	77	72.321	ENSTSYG00000009568	MRPS12	81	72.321	Carlito_syrichta
ENSAMXG00000025945	si:dkey-17e16.10	77	74.336	ENSCAPG00000009543	MRPS12	83	74.336	Cavia_aperea
ENSAMXG00000025945	si:dkey-17e16.10	92	64.706	ENSCPOG00000035217	MRPS12	81	74.336	Cavia_porcellus
ENSAMXG00000025945	si:dkey-17e16.10	91	60.000	ENSCCAG00000035388	MRPS12	80	70.000	Cebus_capucinus
ENSAMXG00000025945	si:dkey-17e16.10	92	62.500	ENSCATG00000038438	MRPS12	80	72.973	Cercocebus_atys
ENSAMXG00000025945	si:dkey-17e16.10	93	63.043	ENSCLAG00000013286	MRPS12	81	74.107	Chinchilla_lanigera
ENSAMXG00000025945	si:dkey-17e16.10	92	63.235	ENSCSAG00000003929	MRPS12	79	74.545	Chlorocebus_sabaeus
ENSAMXG00000025945	si:dkey-17e16.10	59	80.233	ENSCHOG00000008451	MRPS12	62	80.233	Choloepus_hoffmanni
ENSAMXG00000025945	si:dkey-17e16.10	77	83.186	ENSCPBG00000018941	MRPS12	72	83.186	Chrysemys_picta_bellii
ENSAMXG00000025945	si:dkey-17e16.10	57	68.675	ENSCING00000014236	-	61	57.522	Ciona_intestinalis
ENSAMXG00000025945	si:dkey-17e16.10	74	56.140	ENSCSAVG00000008777	-	60	56.140	Ciona_savignyi
ENSAMXG00000025945	si:dkey-17e16.10	92	61.765	ENSCANG00000003652	MRPS12	80	72.072	Colobus_angolensis_palliatus
ENSAMXG00000025945	si:dkey-17e16.10	77	72.566	ENSCGRG00001018968	Mrps12	81	72.566	Cricetulus_griseus_chok1gshd
ENSAMXG00000025945	si:dkey-17e16.10	77	72.566	ENSCGRG00000007113	Mrps12	81	72.566	Cricetulus_griseus_crigri
ENSAMXG00000025945	si:dkey-17e16.10	100	69.178	ENSCSEG00000001174	si:dkey-17e16.10	100	69.178	Cynoglossus_semilaevis
ENSAMXG00000025945	si:dkey-17e16.10	100	71.918	ENSCVAG00000003253	si:dkey-17e16.10	100	71.918	Cyprinodon_variegatus
ENSAMXG00000025945	si:dkey-17e16.10	100	76.027	ENSDARG00000089836	MRPS12	100	76.027	Danio_rerio
ENSAMXG00000025945	si:dkey-17e16.10	85	64.029	ENSDNOG00000003918	MRPS12	81	72.566	Dasypus_novemcinctus
ENSAMXG00000025945	si:dkey-17e16.10	91	62.222	ENSDORG00000001544	Mrps12	81	71.681	Dipodomys_ordii
ENSAMXG00000025945	si:dkey-17e16.10	81	61.983	FBgn0003714	tko	84	61.983	Drosophila_melanogaster
ENSAMXG00000025945	si:dkey-17e16.10	77	71.681	ENSETEG00000017985	MRPS12	81	71.681	Echinops_telfairi
ENSAMXG00000025945	si:dkey-17e16.10	77	75.893	ENSEBUG00000003529	si:dkey-17e16.10	64	75.893	Eptatretus_burgeri
ENSAMXG00000025945	si:dkey-17e16.10	77	72.566	ENSEASG00005019736	MRPS12	81	72.566	Equus_asinus_asinus
ENSAMXG00000025945	si:dkey-17e16.10	77	72.566	ENSECAG00000013794	MRPS12	81	72.566	Equus_caballus
ENSAMXG00000025945	si:dkey-17e16.10	60	51.087	ENSEEUG00000013868	MRPS12	71	64.179	Erinaceus_europaeus
ENSAMXG00000025945	si:dkey-17e16.10	99	77.241	ENSELUG00000014973	si:dkey-17e16.10	99	77.241	Esox_lucius
ENSAMXG00000025945	si:dkey-17e16.10	92	63.235	ENSFCAG00000014573	MRPS12	81	73.451	Felis_catus
ENSAMXG00000025945	si:dkey-17e16.10	75	71.560	ENSFALG00000015276	MRPS12	95	71.560	Ficedula_albicollis
ENSAMXG00000025945	si:dkey-17e16.10	92	62.500	ENSFDAG00000008482	MRPS12	81	70.796	Fukomys_damarensis
ENSAMXG00000025945	si:dkey-17e16.10	100	71.918	ENSFHEG00000004575	si:dkey-17e16.10	100	69.863	Fundulus_heteroclitus
ENSAMXG00000025945	si:dkey-17e16.10	76	82.883	ENSGMOG00000020611	si:dkey-17e16.10	100	82.883	Gadus_morhua
ENSAMXG00000025945	si:dkey-17e16.10	91	67.164	ENSGALG00000038667	MRPS12	82	76.577	Gallus_gallus
ENSAMXG00000025945	si:dkey-17e16.10	98	72.727	ENSGAFG00000007521	si:dkey-17e16.10	99	72.727	Gambusia_affinis
ENSAMXG00000025945	si:dkey-17e16.10	99	65.972	ENSGACG00000003011	si:dkey-17e16.10	100	82.883	Gasterosteus_aculeatus
ENSAMXG00000025945	si:dkey-17e16.10	77	83.036	ENSGAGG00000009748	MRPS12	72	83.036	Gopherus_agassizii
ENSAMXG00000025945	si:dkey-17e16.10	91	60.741	ENSGGOG00000002500	MRPS12	80	70.909	Gorilla_gorilla
ENSAMXG00000025945	si:dkey-17e16.10	100	71.918	ENSHBUG00000014480	si:dkey-17e16.10	100	70.548	Haplochromis_burtoni
ENSAMXG00000025945	si:dkey-17e16.10	92	59.854	ENSHGLG00000014942	MRPS12	81	68.421	Heterocephalus_glaber_female
ENSAMXG00000025945	si:dkey-17e16.10	92	59.854	ENSHGLG00100017710	MRPS12	81	68.421	Heterocephalus_glaber_male
ENSAMXG00000025945	si:dkey-17e16.10	100	69.388	ENSHCOG00000010444	si:dkey-17e16.10	76	83.333	Hippocampus_comes
ENSAMXG00000025945	si:dkey-17e16.10	100	78.767	ENSIPUG00000024651	MRPS12	100	78.767	Ictalurus_punctatus
ENSAMXG00000025945	si:dkey-17e16.10	77	73.451	ENSSTOG00000009006	MRPS12	81	73.451	Ictidomys_tridecemlineatus
ENSAMXG00000025945	si:dkey-17e16.10	77	72.566	ENSJJAG00000017837	Mrps12	81	72.566	Jaculus_jaculus
ENSAMXG00000025945	si:dkey-17e16.10	100	72.603	ENSKMAG00000007949	si:dkey-17e16.10	91	72.603	Kryptolebias_marmoratus
ENSAMXG00000025945	si:dkey-17e16.10	85	78.226	ENSLBEG00000001112	si:dkey-17e16.10	82	83.478	Labrus_bergylta
ENSAMXG00000025945	si:dkey-17e16.10	92	73.723	ENSLACG00000018393	MRPS12	73	81.197	Latimeria_chalumnae
ENSAMXG00000025945	si:dkey-17e16.10	100	67.808	ENSLOCG00000000535	si:dkey-17e16.10	100	67.808	Lepisosteus_oculatus
ENSAMXG00000025945	si:dkey-17e16.10	93	59.420	ENSLAFG00000022140	MRPS12	81	68.142	Loxodonta_africana
ENSAMXG00000025945	si:dkey-17e16.10	92	63.235	ENSMFAG00000044563	MRPS12	80	73.874	Macaca_fascicularis
ENSAMXG00000025945	si:dkey-17e16.10	92	62.500	ENSMNEG00000040379	MRPS12	80	72.973	Macaca_nemestrina
ENSAMXG00000025945	si:dkey-17e16.10	92	62.500	ENSMLEG00000036963	MRPS12	80	72.973	Mandrillus_leucophaeus
ENSAMXG00000025945	si:dkey-17e16.10	98	70.629	ENSMAMG00000017962	si:dkey-17e16.10	82	82.609	Mastacembelus_armatus
ENSAMXG00000025945	si:dkey-17e16.10	100	71.918	ENSMZEG00005017336	si:dkey-17e16.10	100	71.918	Maylandia_zebra
ENSAMXG00000025945	si:dkey-17e16.10	85	68.182	ENSMGAG00000005414	MRPS12	78	77.477	Meleagris_gallopavo
ENSAMXG00000025945	si:dkey-17e16.10	53	68.831	ENSMAUG00000019146	Mrps12	75	68.831	Mesocricetus_auratus
ENSAMXG00000025945	si:dkey-17e16.10	77	71.681	ENSMICG00000045111	MRPS12	81	71.681	Microcebus_murinus
ENSAMXG00000025945	si:dkey-17e16.10	77	75.000	ENSMOCG00000012666	Mrps12	84	75.000	Microtus_ochrogaster
ENSAMXG00000025945	si:dkey-17e16.10	77	83.036	ENSMMOG00000010803	si:dkey-17e16.10	77	83.036	Mola_mola
ENSAMXG00000025945	si:dkey-17e16.10	99	62.759	ENSMODG00000013431	MRPS12	97	63.571	Monodelphis_domestica
ENSAMXG00000025945	si:dkey-17e16.10	100	73.973	ENSMALG00000004190	si:dkey-17e16.10	100	73.973	Monopterus_albus
ENSAMXG00000025945	si:dkey-17e16.10	77	75.221	MGP_CAROLIEiJ_G0029457	Mrps12	85	75.472	Mus_caroli
ENSAMXG00000025945	si:dkey-17e16.10	77	75.221	ENSMUSG00000045948	Mrps12	85	75.472	Mus_musculus
ENSAMXG00000025945	si:dkey-17e16.10	77	75.221	MGP_PahariEiJ_G0012691	Mrps12	85	75.472	Mus_pahari
ENSAMXG00000025945	si:dkey-17e16.10	77	75.221	MGP_SPRETEiJ_G0030553	Mrps12	85	75.472	Mus_spretus
ENSAMXG00000025945	si:dkey-17e16.10	92	63.433	ENSMPUG00000017750	MRPS12	84	73.913	Mustela_putorius_furo
ENSAMXG00000025945	si:dkey-17e16.10	92	64.706	ENSMLUG00000006076	MRPS12	81	74.336	Myotis_lucifugus
ENSAMXG00000025945	si:dkey-17e16.10	77	75.221	ENSNGAG00000022099	Mrps12	81	75.221	Nannospalax_galili
ENSAMXG00000025945	si:dkey-17e16.10	100	72.603	ENSNBRG00000007244	si:dkey-17e16.10	100	72.603	Neolamprologus_brichardi
ENSAMXG00000025945	si:dkey-17e16.10	76	69.369	ENSMEUG00000005688	MRPS12	99	69.369	Notamacropus_eugenii
ENSAMXG00000025945	si:dkey-17e16.10	93	64.493	ENSODEG00000016161	MRPS12	86	74.336	Octodon_degus
ENSAMXG00000025945	si:dkey-17e16.10	100	71.918	ENSONIG00000002022	si:dkey-17e16.10	100	71.918	Oreochromis_niloticus
ENSAMXG00000025945	si:dkey-17e16.10	77	75.221	ENSOCUG00000000689	MRPS12	81	75.000	Oryctolagus_cuniculus
ENSAMXG00000025945	si:dkey-17e16.10	100	70.548	ENSORLG00000007040	si:dkey-17e16.10	100	69.863	Oryzias_latipes
ENSAMXG00000025945	si:dkey-17e16.10	100	70.548	ENSORLG00020011268	MRPS12	100	69.863	Oryzias_latipes_hni
ENSAMXG00000025945	si:dkey-17e16.10	100	70.548	ENSORLG00015009378	MRPS12	100	69.863	Oryzias_latipes_hsok
ENSAMXG00000025945	si:dkey-17e16.10	100	70.548	ENSOMEG00000001427	si:dkey-17e16.10	100	69.595	Oryzias_melastigma
ENSAMXG00000025945	si:dkey-17e16.10	77	71.681	ENSOGAG00000008295	-	81	71.681	Otolemur_garnettii
ENSAMXG00000025945	si:dkey-17e16.10	77	65.487	ENSOGAG00000025634	-	81	65.487	Otolemur_garnettii
ENSAMXG00000025945	si:dkey-17e16.10	77	75.893	ENSOARG00000005927	MRPS12	81	75.893	Ovis_aries
ENSAMXG00000025945	si:dkey-17e16.10	91	60.741	ENSPPAG00000041637	MRPS12	80	70.909	Pan_paniscus
ENSAMXG00000025945	si:dkey-17e16.10	92	63.235	ENSPPRG00000011742	MRPS12	81	73.451	Panthera_pardus
ENSAMXG00000025945	si:dkey-17e16.10	60	79.545	ENSPTIG00000008427	MRPS12	77	75.789	Panthera_tigris_altaica
ENSAMXG00000025945	si:dkey-17e16.10	91	60.741	ENSPTRG00000010948	MRPS12	80	70.909	Pan_troglodytes
ENSAMXG00000025945	si:dkey-17e16.10	92	62.500	ENSPANG00000021673	MRPS12	80	72.973	Papio_anubis
ENSAMXG00000025945	si:dkey-17e16.10	100	73.288	ENSPKIG00000006716	si:dkey-17e16.10	100	73.288	Paramormyrops_kingsleyae
ENSAMXG00000025945	si:dkey-17e16.10	77	83.186	ENSPSIG00000014383	MRPS12	74	83.186	Pelodiscus_sinensis
ENSAMXG00000025945	si:dkey-17e16.10	100	67.808	ENSPMGG00000009631	si:dkey-17e16.10	100	68.707	Periophthalmus_magnuspinnatus
ENSAMXG00000025945	si:dkey-17e16.10	77	74.336	ENSPEMG00000016700	Mrps12	81	74.336	Peromyscus_maniculatus_bairdii
ENSAMXG00000025945	si:dkey-17e16.10	74	75.926	ENSPMAG00000008051	si:dkey-17e16.10	70	75.926	Petromyzon_marinus
ENSAMXG00000025945	si:dkey-17e16.10	99	60.000	ENSPCIG00000010531	-	100	60.000	Phascolarctos_cinereus
ENSAMXG00000025945	si:dkey-17e16.10	100	69.863	ENSPFOG00000018863	si:dkey-17e16.10	100	69.863	Poecilia_formosa
ENSAMXG00000025945	si:dkey-17e16.10	100	69.863	ENSPLAG00000008933	si:dkey-17e16.10	100	69.863	Poecilia_latipinna
ENSAMXG00000025945	si:dkey-17e16.10	100	69.178	ENSPMEG00000005155	si:dkey-17e16.10	95	66.225	Poecilia_mexicana
ENSAMXG00000025945	si:dkey-17e16.10	98	71.329	ENSPREG00000014123	si:dkey-17e16.10	95	71.329	Poecilia_reticulata
ENSAMXG00000025945	si:dkey-17e16.10	91	60.741	ENSPPYG00000009950	MRPS12	80	70.909	Pongo_abelii
ENSAMXG00000025945	si:dkey-17e16.10	93	63.043	ENSPCAG00000010853	MRPS12	82	72.566	Procavia_capensis
ENSAMXG00000025945	si:dkey-17e16.10	77	71.681	ENSPCOG00000020370	MRPS12	81	71.681	Propithecus_coquereli
ENSAMXG00000025945	si:dkey-17e16.10	92	62.500	ENSPVAG00000011605	MRPS12	81	71.681	Pteropus_vampyrus
ENSAMXG00000025945	si:dkey-17e16.10	100	72.603	ENSPNYG00000015506	si:dkey-17e16.10	95	72.603	Pundamilia_nyererei
ENSAMXG00000025945	si:dkey-17e16.10	77	88.496	ENSPNAG00000016315	si:dkey-17e16.10	76	88.496	Pygocentrus_nattereri
ENSAMXG00000025945	si:dkey-17e16.10	77	75.221	ENSRNOG00000019949	Mrps12	81	75.221	Rattus_norvegicus
ENSAMXG00000025945	si:dkey-17e16.10	92	61.765	ENSRBIG00000029741	MRPS12	80	72.072	Rhinopithecus_bieti
ENSAMXG00000025945	si:dkey-17e16.10	92	61.765	ENSRROG00000030787	MRPS12	80	72.072	Rhinopithecus_roxellana
ENSAMXG00000025945	si:dkey-17e16.10	92	61.029	ENSSBOG00000025707	MRPS12	80	71.171	Saimiri_boliviensis_boliviensis
ENSAMXG00000025945	si:dkey-17e16.10	100	70.548	ENSSFOG00015018102	mrps12	100	70.548	Scleropages_formosus
ENSAMXG00000025945	si:dkey-17e16.10	100	72.603	ENSSMAG00000004249	si:dkey-17e16.10	100	72.603	Scophthalmus_maximus
ENSAMXG00000025945	si:dkey-17e16.10	100	72.603	ENSSDUG00000020424	si:dkey-17e16.10	99	72.603	Seriola_dumerili
ENSAMXG00000025945	si:dkey-17e16.10	100	72.603	ENSSLDG00000016320	si:dkey-17e16.10	99	72.603	Seriola_lalandi_dorsalis
ENSAMXG00000025945	si:dkey-17e16.10	77	73.684	ENSSARG00000006985	MRPS12	80	73.684	Sorex_araneus
ENSAMXG00000025945	si:dkey-17e16.10	99	61.438	ENSSPUG00000004675	MRPS12	73	75.893	Sphenodon_punctatus
ENSAMXG00000025945	si:dkey-17e16.10	100	70.548	ENSSPAG00000012951	si:dkey-17e16.10	100	70.548	Stegastes_partitus
ENSAMXG00000025945	si:dkey-17e16.10	77	72.566	ENSSSCG00000031860	MRPS12	89	72.566	Sus_scrofa
ENSAMXG00000025945	si:dkey-17e16.10	75	72.727	ENSTGUG00000016491	MRPS12	100	72.727	Taeniopygia_guttata
ENSAMXG00000025945	si:dkey-17e16.10	99	74.306	ENSTRUG00000017342	si:dkey-17e16.10	80	86.726	Takifugu_rubripes
ENSAMXG00000025945	si:dkey-17e16.10	90	74.242	ENSTNIG00000004898	si:dkey-17e16.10	83	81.579	Tetraodon_nigroviridis
ENSAMXG00000025945	si:dkey-17e16.10	77	73.451	ENSTBEG00000001288	MRPS12	81	73.451	Tupaia_belangeri
ENSAMXG00000025945	si:dkey-17e16.10	77	75.000	ENSTTRG00000011794	MRPS12	81	75.000	Tursiops_truncatus
ENSAMXG00000025945	si:dkey-17e16.10	92	61.029	ENSUAMG00000011626	MRPS12	81	69.912	Ursus_americanus
ENSAMXG00000025945	si:dkey-17e16.10	92	62.500	ENSUMAG00000019235	MRPS12	81	71.681	Ursus_maritimus
ENSAMXG00000025945	si:dkey-17e16.10	92	63.971	ENSVVUG00000006433	MRPS12	57	73.913	Vulpes_vulpes
ENSAMXG00000025945	si:dkey-17e16.10	77	80.531	ENSXETG00000005326	mrps12	76	80.531	Xenopus_tropicalis
ENSAMXG00000025945	si:dkey-17e16.10	98	72.727	ENSXCOG00000020766	si:dkey-17e16.10	95	72.727	Xiphophorus_couchianus
ENSAMXG00000025945	si:dkey-17e16.10	98	72.727	ENSXMAG00000027119	si:dkey-17e16.10	99	72.727	Xiphophorus_maculatus