EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000026016 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 2422 bases
Position: chrAPWO02000067.1:1531389-1533810
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000026721	DNA_pol_A_exo1	PF01612.20	9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000026742	-	1515	-	ENSAMXP00000026721	504 (aa)	-	W5LUA5

Gene Model

Click here to download ENSAMXG00000026016's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000026016's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000026016	-	75	41.278	ENSG00000178997	EXD1	75	48.780	Homo_sapiens
ENSAMXG00000026016	-	88	45.238	ENSAPOG00000004287	-	72	70.561	Acanthochromis_polyacanthus
ENSAMXG00000026016	-	75	42.857	ENSAMEG00000016793	EXD1	70	42.857	Ailuropoda_melanoleuca
ENSAMXG00000026016	-	60	48.077	ENSACIG00000008996	-	78	48.077	Amphilophus_citrinellus
ENSAMXG00000026016	-	88	54.955	ENSAOCG00000009355	-	78	54.955	Amphiprion_ocellaris
ENSAMXG00000026016	-	65	60.790	ENSAPEG00000002194	-	89	60.790	Amphiprion_percula
ENSAMXG00000026016	-	69	50.369	ENSATEG00000002623	-	92	50.369	Anabas_testudineus
ENSAMXG00000026016	-	74	38.677	ENSACAG00000003676	EXD1	100	38.677	Anolis_carolinensis
ENSAMXG00000026016	-	74	43.829	ENSANAG00000029058	EXD1	68	43.829	Aotus_nancymaae
ENSAMXG00000026016	-	75	59.055	ENSACLG00000001361	-	71	59.318	Astatotilapia_calliptera
ENSAMXG00000026016	-	52	49.808	ENSBTAG00000008363	EXD1	55	49.808	Bos_taurus
ENSAMXG00000026016	-	74	42.632	ENSCJAG00000020765	EXD1	67	42.632	Callithrix_jacchus
ENSAMXG00000026016	-	73	41.406	ENSCAFG00000009510	EXD1	67	41.406	Canis_familiaris
ENSAMXG00000026016	-	73	42.257	ENSCHIG00000019606	EXD1	68	42.257	Capra_hircus
ENSAMXG00000026016	-	83	41.801	ENSCPOG00000010573	EXD1	75	41.801	Cavia_porcellus
ENSAMXG00000026016	-	74	41.985	ENSCCAG00000016905	EXD1	68	41.985	Cebus_capucinus
ENSAMXG00000026016	-	74	41.837	ENSCATG00000037400	EXD1	68	41.837	Cercocebus_atys
ENSAMXG00000026016	-	53	36.397	ENSCSAG00000007647	EXD1	53	36.397	Chlorocebus_sabaeus
ENSAMXG00000026016	-	80	39.907	ENSCPBG00000013511	EXD1	69	39.907	Chrysemys_picta_bellii
ENSAMXG00000026016	-	74	41.689	ENSCANG00000036848	EXD1	67	41.689	Colobus_angolensis_palliatus
ENSAMXG00000026016	-	76	42.611	ENSCGRG00001011355	Exd1	69	42.611	Cricetulus_griseus_chok1gshd
ENSAMXG00000026016	-	75	42.893	ENSCGRG00000011633	Exd1	70	42.893	Cricetulus_griseus_crigri
ENSAMXG00000026016	-	76	55.013	ENSCSEG00000000904	-	72	55.013	Cynoglossus_semilaevis
ENSAMXG00000026016	-	68	47.414	ENSDARG00000098669	exd1	93	51.724	Danio_rerio
ENSAMXG00000026016	-	73	42.455	ENSDNOG00000011410	EXD1	70	41.626	Dasypus_novemcinctus
ENSAMXG00000026016	-	52	51.504	ENSDORG00000012079	Exd1	54	51.504	Dipodomys_ordii
ENSAMXG00000026016	-	75	43.622	ENSEASG00005016394	EXD1	70	43.687	Equus_asinus_asinus
ENSAMXG00000026016	-	75	42.543	ENSECAG00000021250	EXD1	70	42.716	Equus_caballus
ENSAMXG00000026016	-	54	43.796	ENSEEUG00000001232	EXD1	55	43.796	Erinaceus_europaeus
ENSAMXG00000026016	-	74	68.254	ENSELUG00000006324	-	66	68.254	Esox_lucius
ENSAMXG00000026016	-	74	41.476	ENSFCAG00000028533	EXD1	69	41.476	Felis_catus
ENSAMXG00000026016	-	63	59.688	ENSGMOG00000015956	-	99	58.133	Gadus_morhua
ENSAMXG00000026016	-	76	38.537	ENSGALG00000041449	EXD1	99	38.537	Gallus_gallus
ENSAMXG00000026016	-	91	51.891	ENSGAFG00000017161	-	89	51.891	Gambusia_affinis
ENSAMXG00000026016	-	78	40.238	ENSGAGG00000019200	EXD1	67	40.238	Gopherus_agassizii
ENSAMXG00000026016	-	75	41.278	ENSGGOG00000004594	EXD1	70	43.142	Gorilla_gorilla
ENSAMXG00000026016	-	50	66.932	ENSHBUG00000017880	-	62	66.932	Haplochromis_burtoni
ENSAMXG00000026016	-	75	41.814	ENSHGLG00000015369	EXD1	70	41.814	Heterocephalus_glaber_female
ENSAMXG00000026016	-	73	42.487	ENSHGLG00100007398	EXD1	69	42.487	Heterocephalus_glaber_male
ENSAMXG00000026016	-	74	56.383	ENSIPUG00000003370	-	99	56.383	Ictalurus_punctatus
ENSAMXG00000026016	-	81	40.319	ENSSTOG00000014980	EXD1	74	40.319	Ictidomys_tridecemlineatus
ENSAMXG00000026016	-	98	52.362	ENSLBEG00000000022	-	88	52.362	Labrus_bergylta
ENSAMXG00000026016	-	54	66.065	ENSLBEG00000010957	-	87	66.065	Labrus_bergylta
ENSAMXG00000026016	-	79	43.607	ENSLACG00000006680	EXD1	73	43.607	Latimeria_chalumnae
ENSAMXG00000026016	-	75	54.286	ENSLOCG00000012278	-	97	54.286	Lepisosteus_oculatus
ENSAMXG00000026016	-	63	41.880	ENSLAFG00000014739	EXD1	65	41.880	Loxodonta_africana
ENSAMXG00000026016	-	74	41.500	ENSMFAG00000034670	EXD1	68	41.500	Macaca_fascicularis
ENSAMXG00000026016	-	74	41.500	ENSMMUG00000013991	EXD1	68	41.500	Macaca_mulatta
ENSAMXG00000026016	-	74	41.310	ENSMNEG00000037333	EXD1	68	41.310	Macaca_nemestrina
ENSAMXG00000026016	-	62	44.136	ENSMLEG00000033153	EXD1	95	44.136	Mandrillus_leucophaeus
ENSAMXG00000026016	-	52	60.821	ENSMAMG00000006592	exd1	66	60.821	Mastacembelus_armatus
ENSAMXG00000026016	-	89	49.513	ENSMZEG00005009193	-	74	59.843	Maylandia_zebra
ENSAMXG00000026016	-	72	39.086	ENSMGAG00000011179	EXD1	98	39.086	Meleagris_gallopavo
ENSAMXG00000026016	-	75	42.893	ENSMAUG00000002698	Exd1	70	42.893	Mesocricetus_auratus
ENSAMXG00000026016	-	75	41.463	ENSMICG00000014337	EXD1	70	41.463	Microcebus_murinus
ENSAMXG00000026016	-	74	43.734	ENSMOCG00000018151	Exd1	69	43.734	Microtus_ochrogaster
ENSAMXG00000026016	-	75	42.222	ENSMODG00000000164	EXD1	77	42.222	Monodelphis_domestica
ENSAMXG00000026016	-	75	53.158	ENSMALG00000015814	-	92	51.485	Monopterus_albus
ENSAMXG00000026016	-	74	43.333	MGP_CAROLIEiJ_G0024145	Exd1	68	43.333	Mus_caroli
ENSAMXG00000026016	-	74	42.821	ENSMUSG00000048647	Exd1	69	42.821	Mus_musculus
ENSAMXG00000026016	-	73	39.175	MGP_PahariEiJ_G0025588	Exd1	66	39.175	Mus_pahari
ENSAMXG00000026016	-	73	43.041	MGP_SPRETEiJ_G0025061	Exd1	68	43.041	Mus_spretus
ENSAMXG00000026016	-	73	43.264	ENSMPUG00000008811	EXD1	67	43.264	Mustela_putorius_furo
ENSAMXG00000026016	-	63	43.567	ENSMLUG00000001466	EXD1	64	43.567	Myotis_lucifugus
ENSAMXG00000026016	-	73	42.564	ENSNGAG00000002319	Exd1	68	42.564	Nannospalax_galili
ENSAMXG00000026016	-	55	66.192	ENSNBRG00000003229	-	87	57.849	Neolamprologus_brichardi
ENSAMXG00000026016	-	74	39.401	ENSNLEG00000003456	EXD1	68	39.401	Nomascus_leucogenys
ENSAMXG00000026016	-	75	59.894	ENSONIG00000012043	-	99	60.158	Oreochromis_niloticus
ENSAMXG00000026016	-	64	43.391	ENSOCUG00000013817	EXD1	69	43.391	Oryctolagus_cuniculus
ENSAMXG00000026016	-	88	50.737	ENSORLG00000026344	-	94	50.737	Oryzias_latipes
ENSAMXG00000026016	-	89	50.104	ENSORLG00020005465	-	96	50.104	Oryzias_latipes_hni
ENSAMXG00000026016	-	89	49.896	ENSORLG00015004848	-	96	52.658	Oryzias_latipes_hsok
ENSAMXG00000026016	-	92	47.705	ENSOMEG00000019812	-	99	47.505	Oryzias_melastigma
ENSAMXG00000026016	-	54	43.682	ENSOGAG00000013095	EXD1	54	44.523	Otolemur_garnettii
ENSAMXG00000026016	-	75	41.422	ENSOARG00000020330	EXD1	70	41.422	Ovis_aries
ENSAMXG00000026016	-	75	41.220	ENSPPAG00000033760	EXD1	70	41.220	Pan_paniscus
ENSAMXG00000026016	-	74	41.730	ENSPPRG00000011128	EXD1	69	41.730	Panthera_pardus
ENSAMXG00000026016	-	74	41.476	ENSPTIG00000020026	EXD1	69	41.476	Panthera_tigris_altaica
ENSAMXG00000026016	-	75	41.220	ENSPTRG00000006941	EXD1	70	41.220	Pan_troglodytes
ENSAMXG00000026016	-	74	41.500	ENSPANG00000019000	EXD1	68	41.500	Papio_anubis
ENSAMXG00000026016	-	99	48.872	ENSPKIG00000000671	-	98	48.872	Paramormyrops_kingsleyae
ENSAMXG00000026016	-	76	40.594	ENSPSIG00000014473	EXD1	66	41.133	Pelodiscus_sinensis
ENSAMXG00000026016	-	91	47.948	ENSPMGG00000015466	-	94	47.948	Periophthalmus_magnuspinnatus
ENSAMXG00000026016	-	76	41.220	ENSPCIG00000027845	EXD1	82	41.220	Phascolarctos_cinereus
ENSAMXG00000026016	-	75	57.853	ENSPFOG00000013673	-	97	57.853	Poecilia_formosa
ENSAMXG00000026016	-	91	51.891	ENSPLAG00000014262	-	89	51.891	Poecilia_latipinna
ENSAMXG00000026016	-	91	51.891	ENSPMEG00000012071	-	89	51.891	Poecilia_mexicana
ENSAMXG00000026016	-	91	52.311	ENSPREG00000019468	-	89	52.311	Poecilia_reticulata
ENSAMXG00000026016	-	54	48.188	ENSPPYG00000006369	EXD1	54	48.188	Pongo_abelii
ENSAMXG00000026016	-	75	42.010	ENSPCOG00000026598	EXD1	67	43.343	Propithecus_coquereli
ENSAMXG00000026016	-	54	48.188	ENSPVAG00000003149	EXD1	52	49.042	Pteropus_vampyrus
ENSAMXG00000026016	-	99	66.333	ENSPNAG00000008931	exd1	95	66.333	Pygocentrus_nattereri
ENSAMXG00000026016	-	73	43.188	ENSRNOG00000025360	Exd1	69	43.188	Rattus_norvegicus
ENSAMXG00000026016	-	62	43.732	ENSRBIG00000037257	EXD1	95	43.732	Rhinopithecus_bieti
ENSAMXG00000026016	-	74	41.750	ENSRROG00000034491	EXD1	68	41.750	Rhinopithecus_roxellana
ENSAMXG00000026016	-	75	37.685	ENSSBOG00000024842	EXD1	67	37.685	Saimiri_boliviensis_boliviensis
ENSAMXG00000026016	-	73	43.152	ENSSHAG00000016701	EXD1	72	43.152	Sarcophilus_harrisii
ENSAMXG00000026016	-	68	48.688	ENSSFOG00015016852	-	93	48.688	Scleropages_formosus
ENSAMXG00000026016	-	64	57.295	ENSSMAG00000005451	-	83	53.191	Scophthalmus_maximus
ENSAMXG00000026016	-	91	49.808	ENSSDUG00000004368	exd1	93	49.623	Seriola_dumerili
ENSAMXG00000026016	-	68	49.749	ENSSLDG00000021803	-	84	49.749	Seriola_lalandi_dorsalis
ENSAMXG00000026016	-	52	50.958	ENSSARG00000009556	-	51	50.958	Sorex_araneus
ENSAMXG00000026016	-	77	39.378	ENSSPUG00000001716	EXD1	63	39.378	Sphenodon_punctatus
ENSAMXG00000026016	-	81	40.509	ENSSSCG00000004752	EXD1	74	40.509	Sus_scrofa
ENSAMXG00000026016	-	73	50.133	ENSTNIG00000017431	-	94	50.133	Tetraodon_nigroviridis
ENSAMXG00000026016	-	50	40.316	ENSTBEG00000003085	EXD1	60	40.316	Tupaia_belangeri
ENSAMXG00000026016	-	52	49.042	ENSTTRG00000009809	EXD1	51	49.042	Tursiops_truncatus
ENSAMXG00000026016	-	75	42.643	ENSUMAG00000012170	EXD1	70	42.643	Ursus_maritimus
ENSAMXG00000026016	-	61	43.590	ENSVPAG00000007758	EXD1	59	43.590	Vicugna_pacos
ENSAMXG00000026016	-	73	42.049	ENSVVUG00000026704	EXD1	67	41.221	Vulpes_vulpes
ENSAMXG00000026016	-	82	36.629	ENSXETG00000017895	exd1	98	39.378	Xenopus_tropicalis
ENSAMXG00000026016	-	63	59.937	ENSXCOG00000010879	-	85	59.937	Xiphophorus_couchianus
ENSAMXG00000026016	-	83	52.304	ENSXMAG00000014462	-	88	59.317	Xiphophorus_maculatus