EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000026085 (Gene tree)
Gene ID: 103047457
Gene Symbol: -
Alias: -
Full Name: GTPase IMAP family member 4-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 7638 bases
Position: chr2:400945-408582
Accession: 103047457
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000043649	MMR_HSR1	PF01926.23	1.1e-06	1	1
ENSAMXP00000026790	MMR_HSR1	PF01926.23	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000039772	-	2871	-	ENSAMXP00000043649	275 (aa)	-	-
ENSAMXT00000026811	-	2583	XM_022677548	ENSAMXP00000026790	289 (aa)	XP_022533269	W5LUH4

Gene Model

Click here to download ENSAMXG00000026085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000026085's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000026085	-	76	33.582	ENSAMXG00000002562	-	82	33.333
ENSAMXG00000026085	-	71	32.039	ENSAMXG00000038358	-	51	32.804
ENSAMXG00000026085	-	75	31.905	ENSAMXG00000031923	-	77	32.212
ENSAMXG00000026085	-	81	31.148	ENSAMXG00000033190	-	66	33.684
ENSAMXG00000026085	-	74	31.163	ENSAMXG00000030926	-	55	31.401
ENSAMXG00000026085	-	68	32.990	ENSAMXG00000037101	zgc:113625	67	33.508
ENSAMXG00000026085	-	83	31.897	ENSAMXG00000035878	-	74	32.258
ENSAMXG00000026085	-	67	34.225	ENSAMXG00000037808	-	65	33.152
ENSAMXG00000026085	-	80	31.210	ENSAMXG00000038580	-	75	31.783
ENSAMXG00000026085	-	71	32.673	ENSAMXG00000032951	-	69	33.862
ENSAMXG00000026085	-	68	33.161	ENSAMXG00000035357	-	56	33.862
ENSAMXG00000026085	-	84	32.636	ENSAMXG00000024933	-	68	33.641
ENSAMXG00000026085	-	70	32.487	ENSAMXG00000031086	-	83	31.915
ENSAMXG00000026085	-	76	30.374	ENSAMXG00000042243	-	82	30.928
ENSAMXG00000026085	-	69	33.503	ENSAMXG00000035963	-	60	32.804
ENSAMXG00000026085	-	68	38.095	ENSAMXG00000043471	-	53	38.172
ENSAMXG00000026085	-	91	31.373	ENSAMXG00000013450	-	50	34.946
ENSAMXG00000026085	-	86	32.567	ENSAMXG00000030288	-	56	32.381
ENSAMXG00000026085	-	67	31.579	ENSAMXG00000041888	-	86	31.746
ENSAMXG00000026085	-	83	34.177	ENSAMXG00000032381	-	51	37.097
ENSAMXG00000026085	-	61	30.058	ENSAMXG00000041745	-	76	30.682
ENSAMXG00000026085	-	80	31.390	ENSAMXG00000039735	-	61	31.720
ENSAMXG00000026085	-	83	30.085	ENSAMXG00000006341	-	68	31.720
ENSAMXG00000026085	-	67	33.862	ENSAMXG00000040708	-	66	33.871
ENSAMXG00000026085	-	90	40.708	ENSAMXG00000030744	-	74	44.385
ENSAMXG00000026085	-	69	34.171	ENSAMXG00000036745	-	60	34.197
ENSAMXG00000026085	-	92	35.829	ENSAMXG00000006064	-	62	36.066
ENSAMXG00000026085	-	80	35.945	ENSAMXG00000036317	-	82	37.368
ENSAMXG00000026085	-	69	31.633	ENSAMXG00000033160	-	83	31.282
ENSAMXG00000026085	-	67	31.383	ENSAMXG00000041240	-	73	31.892
ENSAMXG00000026085	-	60	31.609	ENSAMXG00000031181	-	61	31.579
ENSAMXG00000026085	-	81	33.333	ENSAMXG00000030501	-	57	36.508
ENSAMXG00000026085	-	59	35.119	ENSAMXG00000031676	-	92	34.545
ENSAMXG00000026085	-	68	35.979	ENSAMXG00000032601	zgc:165583	56	35.484
ENSAMXG00000026085	-	77	31.963	ENSAMXG00000037647	-	74	34.043
ENSAMXG00000026085	-	67	35.829	ENSAMXG00000042848	-	78	36.022
ENSAMXG00000026085	-	70	33.673	ENSAMXG00000038930	-	57	34.211
ENSAMXG00000026085	-	84	30.252	ENSAMXG00000012113	-	60	32.258
ENSAMXG00000026085	-	70	34.171	ENSAMXG00000015575	-	58	34.392
ENSAMXG00000026085	-	84	35.185	ENSAMXG00000035621	-	81	35.500
ENSAMXG00000026085	-	84	30.932	ENSAMXG00000033324	-	52	32.850
ENSAMXG00000026085	-	70	34.328	ENSAMXG00000043776	-	65	35.417
ENSAMXG00000026085	-	87	41.026	ENSAMXG00000040688	-	52	40.625
ENSAMXG00000026085	-	63	32.432	ENSAMXG00000030826	-	81	32.597
ENSAMXG00000026085	-	87	31.500	ENSAMXG00000030783	-	62	30.688
ENSAMXG00000026085	-	69	30.928	ENSAMXG00000029396	-	63	30.851
ENSAMXG00000026085	-	64	35.754	ENSAMXG00000002402	-	70	35.795
ENSAMXG00000026085	-	67	34.759	ENSAMXG00000037798	-	57	34.946
ENSAMXG00000026085	-	86	31.538	ENSAMXG00000038070	-	89	37.297
ENSAMXG00000026085	-	68	37.895	ENSAMXG00000019109	-	81	37.968
ENSAMXG00000026085	-	84	32.203	ENSAMXG00000035792	-	64	32.804
ENSAMXG00000026085	-	67	38.172	ENSAMXG00000009216	-	85	37.705
ENSAMXG00000026085	-	89	31.925	ENSAMXG00000033117	-	64	33.690
ENSAMXG00000026085	-	68	34.555	ENSAMXG00000040298	-	73	34.574
ENSAMXG00000026085	-	82	32.456	ENSAMXG00000042278	-	55	32.258
ENSAMXG00000026085	-	68	30.688	ENSAMXG00000036272	-	78	30.675
ENSAMXG00000026085	-	67	34.574	ENSAMXG00000021622	-	75	34.759
ENSAMXG00000026085	-	66	32.275	ENSAMXG00000031180	-	89	30.392
ENSAMXG00000026085	-	77	33.180	ENSAMXG00000042454	-	60	31.731
ENSAMXG00000026085	-	86	30.453	ENSAMXG00000039994	-	50	36.000
ENSAMXG00000026085	-	85	30.000	ENSAMXG00000031962	-	62	33.503
ENSAMXG00000026085	-	83	32.051	ENSAMXG00000007079	-	70	33.511
ENSAMXG00000026085	-	80	32.035	ENSAMXG00000025201	si:dkey-125e8.4	53	34.536
ENSAMXG00000026085	-	78	32.727	ENSAMXG00000041969	si:ch1073-185p12.2	59	33.824
ENSAMXG00000026085	-	69	30.769	ENSAMXG00000035925	-	80	30.481
ENSAMXG00000026085	-	69	41.711	ENSAMXG00000021387	-	58	41.848
ENSAMXG00000026085	-	60	34.078	ENSAMXG00000039685	-	67	32.941
ENSAMXG00000026085	-	89	31.746	ENSAMXG00000038457	-	83	33.333
ENSAMXG00000026085	-	62	35.057	ENSAMXG00000043950	-	80	35.088
ENSAMXG00000026085	-	69	33.161	ENSAMXG00000030472	-	76	34.946
ENSAMXG00000026085	-	67	38.503	ENSAMXG00000033886	-	77	38.710
ENSAMXG00000026085	-	72	34.314	ENSAMXG00000013452	-	58	35.577
ENSAMXG00000026085	-	76	32.243	ENSAMXG00000029731	-	65	33.690
ENSAMXG00000026085	-	83	33.854	ENSAMXG00000032368	-	76	33.511
ENSAMXG00000026085	-	71	37.186	ENSAMXG00000041148	-	72	37.634
ENSAMXG00000026085	-	69	34.518	ENSAMXG00000030159	-	54	34.896
ENSAMXG00000026085	-	67	38.503	ENSAMXG00000038335	-	79	38.710
ENSAMXG00000026085	-	67	34.225	ENSAMXG00000035161	-	62	31.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000026085	-	76	35.514	ENSACIG00000009811	-	85	35.407	Amphilophus_citrinellus
ENSAMXG00000026085	-	71	36.923	ENSACIG00000007725	-	67	37.766	Amphilophus_citrinellus
ENSAMXG00000026085	-	62	33.918	ENSACIG00000007737	-	68	34.054	Amphilophus_citrinellus
ENSAMXG00000026085	-	76	31.579	ENSAOCG00000003425	-	69	33.854	Amphiprion_ocellaris
ENSAMXG00000026085	-	83	36.264	ENSAOCG00000004579	-	80	36.719	Amphiprion_ocellaris
ENSAMXG00000026085	-	86	38.288	ENSAPEG00000001491	-	58	39.000	Amphiprion_percula
ENSAMXG00000026085	-	83	38.122	ENSAPEG00000014403	-	59	40.331	Amphiprion_percula
ENSAMXG00000026085	-	80	38.222	ENSATEG00000023053	-	87	38.164	Anabas_testudineus
ENSAMXG00000026085	-	78	37.799	ENSATEG00000015654	-	65	37.745	Anabas_testudineus
ENSAMXG00000026085	-	82	37.885	ENSACLG00000014795	-	64	38.587	Astatotilapia_calliptera
ENSAMXG00000026085	-	85	37.500	ENSCSEG00000021519	-	78	37.306	Cynoglossus_semilaevis
ENSAMXG00000026085	-	88	32.669	ENSCVAG00000005778	-	63	35.106	Cyprinodon_variegatus
ENSAMXG00000026085	-	84	35.169	ENSCVAG00000003054	-	63	36.702	Cyprinodon_variegatus
ENSAMXG00000026085	-	83	37.229	ENSCVAG00000012268	-	59	40.000	Cyprinodon_variegatus
ENSAMXG00000026085	-	69	36.224	ENSDARG00000102683	CR626941.1	68	36.649	Danio_rerio
ENSAMXG00000026085	-	81	40.359	ENSDARG00000063481	si:ch211-214j24.15	57	40.291	Danio_rerio
ENSAMXG00000026085	-	85	53.648	ENSELUG00000018709	-	67	53.571	Esox_lucius
ENSAMXG00000026085	-	69	42.708	ENSELUG00000018192	-	87	42.857	Esox_lucius
ENSAMXG00000026085	-	73	45.320	ENSELUG00000024502	-	67	46.316	Esox_lucius
ENSAMXG00000026085	-	79	34.222	ENSELUG00000003217	-	78	35.417	Esox_lucius
ENSAMXG00000026085	-	70	40.415	ENSFHEG00000023334	-	70	40.761	Fundulus_heteroclitus
ENSAMXG00000026085	-	89	38.136	ENSFHEG00000020783	-	82	40.984	Fundulus_heteroclitus
ENSAMXG00000026085	-	71	38.806	ENSGMOG00000001626	-	99	39.674	Gadus_morhua
ENSAMXG00000026085	-	71	37.968	ENSGAFG00000020826	-	82	37.500	Gambusia_affinis
ENSAMXG00000026085	-	79	37.104	ENSHBUG00000016284	-	92	37.198	Haplochromis_burtoni
ENSAMXG00000026085	-	81	35.714	ENSHBUG00000001242	-	53	36.598	Haplochromis_burtoni
ENSAMXG00000026085	-	76	35.749	ENSHBUG00000008326	-	89	35.326	Haplochromis_burtoni
ENSAMXG00000026085	-	81	68.750	ENSIPUG00000013342	-	64	72.864	Ictalurus_punctatus
ENSAMXG00000026085	-	85	36.898	ENSKMAG00000004774	-	61	40.217	Kryptolebias_marmoratus
ENSAMXG00000026085	-	80	35.000	ENSKMAG00000014605	-	62	36.598	Kryptolebias_marmoratus
ENSAMXG00000026085	-	82	35.526	ENSKMAG00000009600	-	63	39.130	Kryptolebias_marmoratus
ENSAMXG00000026085	-	83	34.483	ENSLBEG00000019652	-	62	40.217	Labrus_bergylta
ENSAMXG00000026085	-	76	39.810	ENSLOCG00000000517	-	55	40.642	Lepisosteus_oculatus
ENSAMXG00000026085	-	68	38.503	ENSLOCG00000000385	-	58	39.459	Lepisosteus_oculatus
ENSAMXG00000026085	-	68	42.246	ENSLOCG00000000082	-	66	42.935	Lepisosteus_oculatus
ENSAMXG00000026085	-	67	45.455	ENSLOCG00000017852	-	66	45.652	Lepisosteus_oculatus
ENSAMXG00000026085	-	79	40.541	ENSLOCG00000018072	-	72	44.920	Lepisosteus_oculatus
ENSAMXG00000026085	-	80	39.910	ENSLOCG00000012075	-	88	42.714	Lepisosteus_oculatus
ENSAMXG00000026085	-	92	37.262	ENSLOCG00000016496	-	55	40.686	Lepisosteus_oculatus
ENSAMXG00000026085	-	80	33.937	ENSMAMG00000021970	-	87	34.804	Mastacembelus_armatus
ENSAMXG00000026085	-	77	36.866	ENSMAMG00000015600	-	66	37.681	Mastacembelus_armatus
ENSAMXG00000026085	-	87	35.021	ENSMAMG00000021969	-	51	38.830	Mastacembelus_armatus
ENSAMXG00000026085	-	83	36.402	ENSMMOG00000012876	-	56	40.761	Mola_mola
ENSAMXG00000026085	-	79	31.556	ENSMMOG00000016864	-	75	32.524	Mola_mola
ENSAMXG00000026085	-	81	34.348	ENSNBRG00000002136	-	62	39.247	Neolamprologus_brichardi
ENSAMXG00000026085	-	81	37.273	ENSORLG00000002031	-	54	41.111	Oryzias_latipes
ENSAMXG00000026085	-	86	38.991	ENSORLG00000002537	-	58	40.097	Oryzias_latipes
ENSAMXG00000026085	-	94	39.908	ENSORLG00020011284	-	72	41.791	Oryzias_latipes_hni
ENSAMXG00000026085	-	84	37.615	ENSORLG00020008323	-	54	41.111	Oryzias_latipes_hni
ENSAMXG00000026085	-	61	36.471	ENSORLG00020017387	-	69	36.747	Oryzias_latipes_hni
ENSAMXG00000026085	-	87	40.513	ENSORLG00020008286	-	72	41.111	Oryzias_latipes_hni
ENSAMXG00000026085	-	85	38.532	ENSORLG00015004110	-	58	39.614	Oryzias_latipes_hsok
ENSAMXG00000026085	-	61	36.095	ENSORLG00015023234	-	83	36.145	Oryzias_latipes_hsok
ENSAMXG00000026085	-	79	40.957	ENSORLG00015004522	-	53	41.667	Oryzias_latipes_hsok
ENSAMXG00000026085	-	82	41.176	ENSOMEG00000020433	-	72	40.976	Oryzias_melastigma
ENSAMXG00000026085	-	84	41.951	ENSOMEG00000010594	-	85	41.872	Oryzias_melastigma
ENSAMXG00000026085	-	73	40.394	ENSPKIG00000017193	-	83	40.500	Paramormyrops_kingsleyae
ENSAMXG00000026085	-	78	39.545	ENSPKIG00000017688	-	63	43.548	Paramormyrops_kingsleyae
ENSAMXG00000026085	-	80	34.978	ENSPMGG00000014055	-	73	36.957	Periophthalmus_magnuspinnatus
ENSAMXG00000026085	-	80	34.842	ENSPMGG00000014056	-	75	34.500	Periophthalmus_magnuspinnatus
ENSAMXG00000026085	-	87	36.885	ENSPMGG00000017993	-	72	39.572	Periophthalmus_magnuspinnatus
ENSAMXG00000026085	-	69	37.949	ENSPFOG00000022479	-	77	38.503	Poecilia_formosa
ENSAMXG00000026085	-	70	39.247	ENSPFOG00000006124	-	82	38.798	Poecilia_formosa
ENSAMXG00000026085	-	85	40.107	ENSPFOG00000016787	-	76	40.217	Poecilia_formosa
ENSAMXG00000026085	-	81	41.063	ENSPFOG00000013109	-	82	41.709	Poecilia_formosa
ENSAMXG00000026085	-	88	40.000	ENSPFOG00000000191	-	61	40.107	Poecilia_formosa
ENSAMXG00000026085	-	68	43.316	ENSPFOG00000005689	si:dkey-185m8.2	64	43.478	Poecilia_formosa
ENSAMXG00000026085	-	81	42.051	ENSPFOG00000012732	-	64	42.473	Poecilia_formosa
ENSAMXG00000026085	-	87	39.450	ENSPFOG00000013349	-	67	40.541	Poecilia_formosa
ENSAMXG00000026085	-	70	39.691	ENSPFOG00000015865	-	79	40.323	Poecilia_formosa
ENSAMXG00000026085	-	70	40.000	ENSPFOG00000015871	-	73	40.838	Poecilia_formosa
ENSAMXG00000026085	-	87	39.691	ENSPFOG00000015875	-	72	40.323	Poecilia_formosa
ENSAMXG00000026085	-	76	40.513	ENSPFOG00000022853	-	82	39.706	Poecilia_formosa
ENSAMXG00000026085	-	76	34.434	ENSPLAG00000018911	-	68	34.375	Poecilia_latipinna
ENSAMXG00000026085	-	79	36.530	ENSPLAG00000018606	-	68	39.674	Poecilia_latipinna
ENSAMXG00000026085	-	69	42.021	ENSPLAG00000020776	-	80	42.162	Poecilia_latipinna
ENSAMXG00000026085	-	80	34.559	ENSPLAG00000018692	-	82	33.913	Poecilia_latipinna
ENSAMXG00000026085	-	69	38.974	ENSPLAG00000003020	-	74	39.785	Poecilia_latipinna
ENSAMXG00000026085	-	81	33.761	ENSPLAG00000018664	-	66	33.508	Poecilia_latipinna
ENSAMXG00000026085	-	94	34.188	ENSPMEG00000000604	-	61	39.130	Poecilia_mexicana
ENSAMXG00000026085	-	87	30.645	ENSPMEG00000006334	-	64	34.211	Poecilia_mexicana
ENSAMXG00000026085	-	66	42.162	ENSPMEG00000020297	-	64	42.162	Poecilia_mexicana
ENSAMXG00000026085	-	65	33.155	ENSPMEG00000010605	-	71	33.333	Poecilia_mexicana
ENSAMXG00000026085	-	76	33.962	ENSPMEG00000018950	-	68	33.854	Poecilia_mexicana
ENSAMXG00000026085	-	59	39.881	ENSPMEG00000020252	-	71	40.000	Poecilia_mexicana
ENSAMXG00000026085	-	83	40.722	ENSPMEG00000005912	-	64	41.398	Poecilia_mexicana
ENSAMXG00000026085	-	88	33.086	ENSPMEG00000000724	-	56	33.810	Poecilia_mexicana
ENSAMXG00000026085	-	90	36.697	ENSPREG00000020440	-	63	39.459	Poecilia_reticulata
ENSAMXG00000026085	-	69	39.175	ENSPREG00000001250	-	71	39.785	Poecilia_reticulata
ENSAMXG00000026085	-	80	41.146	ENSPREG00000001530	-	61	41.848	Poecilia_reticulata
ENSAMXG00000026085	-	76	32.864	ENSPNYG00000010004	-	63	36.559	Pundamilia_nyererei
ENSAMXG00000026085	-	85	32.489	ENSPNAG00000019899	-	80	34.975	Pygocentrus_nattereri
ENSAMXG00000026085	-	77	35.979	ENSPNAG00000013132	-	62	36.022	Pygocentrus_nattereri
ENSAMXG00000026085	-	68	38.503	ENSPNAG00000014932	-	56	39.130	Pygocentrus_nattereri
ENSAMXG00000026085	-	82	73.894	ENSPNAG00000025850	-	91	71.984	Pygocentrus_nattereri
ENSAMXG00000026085	-	84	38.627	ENSPNAG00000002097	-	78	38.500	Pygocentrus_nattereri
ENSAMXG00000026085	-	80	34.483	ENSSFOG00015002503	-	76	35.122	Scleropages_formosus
ENSAMXG00000026085	-	69	33.862	ENSSFOG00015002507	-	69	34.066	Scleropages_formosus
ENSAMXG00000026085	-	68	40.415	ENSSFOG00015002420	-	69	40.526	Scleropages_formosus
ENSAMXG00000026085	-	88	39.381	ENSSMAG00000012187	-	59	38.587	Scophthalmus_maximus
ENSAMXG00000026085	-	93	31.660	ENSSDUG00000022299	-	73	35.025	Seriola_dumerili
ENSAMXG00000026085	-	83	35.514	ENSSLDG00000010531	-	78	38.378	Seriola_lalandi_dorsalis
ENSAMXG00000026085	-	88	36.910	ENSSLDG00000005786	-	58	37.811	Seriola_lalandi_dorsalis
ENSAMXG00000026085	-	77	37.234	ENSSLDG00000009168	-	76	38.378	Seriola_lalandi_dorsalis
ENSAMXG00000026085	-	66	37.363	ENSSPAG00000015927	-	71	39.444	Stegastes_partitus
ENSAMXG00000026085	-	96	34.343	ENSSPAG00000017616	-	72	39.109	Stegastes_partitus
ENSAMXG00000026085	-	84	39.744	ENSTRUG00000018070	-	61	43.784	Takifugu_rubripes
ENSAMXG00000026085	-	84	40.693	ENSTRUG00000020422	-	66	42.424	Takifugu_rubripes
ENSAMXG00000026085	-	82	38.462	ENSTNIG00000004275	-	75	40.741	Tetraodon_nigroviridis
ENSAMXG00000026085	-	68	44.271	ENSTNIG00000004220	-	74	44.444	Tetraodon_nigroviridis
ENSAMXG00000026085	-	76	41.981	ENSXCOG00000018421	-	80	43.229	Xiphophorus_couchianus
ENSAMXG00000026085	-	68	42.781	ENSXCOG00000009005	-	68	42.935	Xiphophorus_couchianus
ENSAMXG00000026085	-	73	39.024	ENSXMAG00000023360	-	67	39.785	Xiphophorus_maculatus