EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000029130 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: Ras homolog%2C mTORC1 binding
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 37639 bases
Position: chr10:29209588-29247226
Accession: 103021747
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000045975	MMR_HSR1	PF01926.23	7.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000037566	-	540	XM_022673920	ENSAMXP00000045975	179 (aa)	XP_022529641	-

Gene Model

Click here to download ENSAMXG00000029130's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000029130's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000029130	-	91	35.088	ENSAMXG00000004630	rab6ba	84	35.088
ENSAMXG00000029130	-	78	30.667	ENSAMXG00000026059	RAB9A	74	30.667
ENSAMXG00000029130	-	78	32.667	ENSAMXG00000003717	rab39bb	69	32.667
ENSAMXG00000029130	-	73	36.765	ENSAMXG00000012327	nras	81	37.415
ENSAMXG00000029130	-	78	33.793	ENSAMXG00000013054	rab22a	73	33.793
ENSAMXG00000029130	-	78	31.333	ENSAMXG00000002254	-	72	31.333
ENSAMXG00000029130	-	78	33.793	ENSAMXG00000037267	-	68	33.793
ENSAMXG00000029130	-	78	35.172	ENSAMXG00000032564	rab1ab	71	35.172
ENSAMXG00000029130	-	78	36.486	ENSAMXG00000033216	rab41	73	36.486
ENSAMXG00000029130	-	79	34.459	ENSAMXG00000040126	-	54	34.459
ENSAMXG00000029130	-	73	36.029	ENSAMXG00000033907	hrasb	77	36.735
ENSAMXG00000029130	-	78	46.207	ENSAMXG00000033390	rap1aa	74	46.207
ENSAMXG00000029130	-	79	31.293	ENSAMXG00000029712	rab25b	69	31.293
ENSAMXG00000029130	-	72	37.313	ENSAMXG00000033764	si:ch73-116o1.2	70	37.931
ENSAMXG00000029130	-	78	34.014	ENSAMXG00000024632	rab11al	71	34.014
ENSAMXG00000029130	-	78	34.483	ENSAMXG00000034850	-	71	34.483
ENSAMXG00000029130	-	78	33.793	ENSAMXG00000043717	rab5c	65	33.103
ENSAMXG00000029130	-	78	34.483	ENSAMXG00000003547	rab1ba	65	34.483
ENSAMXG00000029130	-	78	33.333	ENSAMXG00000041657	rab39ba	69	33.333
ENSAMXG00000029130	-	73	36.765	ENSAMXG00000017217	kras	78	37.415
ENSAMXG00000029130	-	74	36.232	ENSAMXG00000014960	rab23	70	36.054
ENSAMXG00000029130	-	77	34.028	ENSAMXG00000003155	rab11a	67	34.028
ENSAMXG00000029130	-	82	30.769	ENSAMXG00000004882	rab12	63	30.769
ENSAMXG00000029130	-	78	30.667	ENSAMXG00000032027	rab7a	72	30.667
ENSAMXG00000029130	-	72	38.806	ENSAMXG00000010919	mras	70	39.310
ENSAMXG00000029130	-	81	35.714	ENSAMXG00000040286	rab33ba	65	35.484
ENSAMXG00000029130	-	72	40.602	ENSAMXG00000010334	rras	71	40.972
ENSAMXG00000029130	-	79	32.432	ENSAMXG00000043951	rab15	69	32.432
ENSAMXG00000029130	-	79	36.000	ENSAMXG00000040604	-	72	36.000
ENSAMXG00000029130	-	93	33.333	ENSAMXG00000040879	rab25a	86	33.333
ENSAMXG00000029130	-	79	33.784	ENSAMXG00000009640	rab14	68	33.784
ENSAMXG00000029130	-	78	36.552	ENSAMXG00000036772	rab2a	68	36.552
ENSAMXG00000029130	-	78	32.692	ENSAMXG00000033427	rasl10a	77	32.692
ENSAMXG00000029130	-	77	34.722	ENSAMXG00000042655	rab11bb	66	34.722
ENSAMXG00000029130	-	79	33.333	ENSAMXG00000042419	rab3c	67	33.333
ENSAMXG00000029130	-	79	35.948	ENSAMXG00000032663	si:dkey-13a21.4	70	35.948
ENSAMXG00000029130	-	78	34.694	ENSAMXG00000040460	zgc:101559	60	34.694
ENSAMXG00000029130	-	78	33.562	ENSAMXG00000033470	RAB15	68	33.562
ENSAMXG00000029130	-	78	31.333	ENSAMXG00000031957	zgc:100918	73	31.333
ENSAMXG00000029130	-	79	36.000	ENSAMXG00000039865	rab35b	72	36.000
ENSAMXG00000029130	-	83	32.164	ENSAMXG00000036330	RAB38	75	32.164
ENSAMXG00000029130	-	80	36.054	ENSAMXG00000033069	si:cabz01085950.1	72	36.054
ENSAMXG00000029130	-	82	32.051	ENSAMXG00000042073	rab18b	74	32.051
ENSAMXG00000029130	-	77	34.028	ENSAMXG00000037623	-	66	34.028
ENSAMXG00000029130	-	79	34.667	ENSAMXG00000038243	si:dkey-16l2.16	72	38.462
ENSAMXG00000029130	-	78	33.103	ENSAMXG00000035919	rab5ab	66	33.103
ENSAMXG00000029130	-	79	33.333	ENSAMXG00000037428	-	71	32.886
ENSAMXG00000029130	-	94	34.254	ENSAMXG00000039486	zgc:171927	86	34.254
ENSAMXG00000029130	-	84	36.585	ENSAMXG00000032547	rab6a	75	36.585
ENSAMXG00000029130	-	78	38.255	ENSAMXG00000030712	rab13	71	38.255
ENSAMXG00000029130	-	79	34.459	ENSAMXG00000032729	rab42a	69	34.459
ENSAMXG00000029130	-	78	33.103	ENSAMXG00000036179	rab5aa	67	33.103
ENSAMXG00000029130	-	73	36.029	ENSAMXG00000035885	hrasa	77	36.735
ENSAMXG00000029130	-	79	32.886	ENSAMXG00000009935	rab30	59	32.886

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000029130	-	88	80.247	ENSAPOG00000003215	-	88	80.247	Acanthochromis_polyacanthus
ENSAMXG00000029130	-	88	85.802	ENSAPOG00000004311	-	88	85.802	Acanthochromis_polyacanthus
ENSAMXG00000029130	-	88	75.926	ENSACIG00000009071	rheb	87	75.926	Amphilophus_citrinellus
ENSAMXG00000029130	-	88	85.802	ENSAOCG00000010265	rheb	88	85.802	Amphiprion_ocellaris
ENSAMXG00000029130	-	88	79.630	ENSAPEG00000001800	-	88	79.630	Amphiprion_percula
ENSAMXG00000029130	-	88	85.802	ENSAPEG00000023408	rheb	88	85.802	Amphiprion_percula
ENSAMXG00000029130	-	88	85.802	ENSATEG00000020171	rheb	88	85.802	Anabas_testudineus
ENSAMXG00000029130	-	88	80.864	ENSATEG00000017315	-	88	80.864	Anabas_testudineus
ENSAMXG00000029130	-	88	85.802	ENSACLG00000008646	rheb	88	85.802	Astatotilapia_calliptera
ENSAMXG00000029130	-	88	85.802	ENSCSEG00000016611	rheb	88	85.802	Cynoglossus_semilaevis
ENSAMXG00000029130	-	88	85.802	ENSCVAG00000004027	rheb	89	85.802	Cyprinodon_variegatus
ENSAMXG00000029130	-	88	76.543	ENSEBUG00000002306	rheb	88	76.543	Eptatretus_burgeri
ENSAMXG00000029130	-	88	83.333	ENSELUG00000006480	rheb	88	83.333	Esox_lucius
ENSAMXG00000029130	-	88	85.802	ENSELUG00000018367	rheb	88	85.802	Esox_lucius
ENSAMXG00000029130	-	88	85.802	ENSFHEG00000003799	rheb	89	85.802	Fundulus_heteroclitus
ENSAMXG00000029130	-	88	85.185	ENSGMOG00000012401	rheb	88	85.185	Gadus_morhua
ENSAMXG00000029130	-	88	85.802	ENSGAFG00000020906	rheb	89	85.802	Gambusia_affinis
ENSAMXG00000029130	-	88	85.802	ENSGACG00000016680	rheb	88	85.802	Gasterosteus_aculeatus
ENSAMXG00000029130	-	88	85.802	ENSHBUG00000007788	rheb	88	85.802	Haplochromis_burtoni
ENSAMXG00000029130	-	88	83.951	ENSHCOG00000013807	rheb	88	83.951	Hippocampus_comes
ENSAMXG00000029130	-	88	76.543	ENSIPUG00000024568	rheb	87	76.543	Ictalurus_punctatus
ENSAMXG00000029130	-	88	85.802	ENSKMAG00000020448	rheb	88	85.802	Kryptolebias_marmoratus
ENSAMXG00000029130	-	88	85.802	ENSLBEG00000014885	rheb	88	85.802	Labrus_bergylta
ENSAMXG00000029130	-	88	85.185	ENSLACG00000012088	rheb	88	85.185	Latimeria_chalumnae
ENSAMXG00000029130	-	88	87.654	ENSLOCG00000010004	rheb	88	87.654	Lepisosteus_oculatus
ENSAMXG00000029130	-	88	85.802	ENSMAMG00000006281	rheb	88	85.802	Mastacembelus_armatus
ENSAMXG00000029130	-	88	85.802	ENSMZEG00005024338	rheb	88	85.802	Maylandia_zebra
ENSAMXG00000029130	-	88	85.802	ENSMMOG00000020986	rheb	88	85.802	Mola_mola
ENSAMXG00000029130	-	83	80.519	ENSMALG00000017903	rheb	85	80.519	Monopterus_albus
ENSAMXG00000029130	-	88	85.802	ENSNBRG00000013795	rheb	88	85.802	Neolamprologus_brichardi
ENSAMXG00000029130	-	88	85.802	ENSONIG00000018503	rheb	88	85.802	Oreochromis_niloticus
ENSAMXG00000029130	-	88	85.185	ENSORLG00000003681	rheb	88	85.185	Oryzias_latipes
ENSAMXG00000029130	-	88	75.926	ENSORLG00000025819	-	88	75.926	Oryzias_latipes
ENSAMXG00000029130	-	88	85.802	ENSORLG00020002801	rheb	88	85.802	Oryzias_latipes_hni
ENSAMXG00000029130	-	88	75.926	ENSORLG00020010114	-	88	75.926	Oryzias_latipes_hni
ENSAMXG00000029130	-	88	75.926	ENSORLG00015006780	-	88	75.926	Oryzias_latipes_hsok
ENSAMXG00000029130	-	88	85.802	ENSORLG00015002191	rheb	88	85.802	Oryzias_latipes_hsok
ENSAMXG00000029130	-	88	85.802	ENSOMEG00000013685	rheb	88	85.802	Oryzias_melastigma
ENSAMXG00000029130	-	88	87.654	ENSPKIG00000013982	rheb	88	87.654	Paramormyrops_kingsleyae
ENSAMXG00000029130	-	88	85.185	ENSPMGG00000018458	rheb	88	85.185	Periophthalmus_magnuspinnatus
ENSAMXG00000029130	-	93	74.432	ENSPMAG00000000547	rheb	96	74.432	Petromyzon_marinus
ENSAMXG00000029130	-	88	85.802	ENSPFOG00000004921	rheb	89	85.802	Poecilia_formosa
ENSAMXG00000029130	-	88	85.802	ENSPLAG00000001529	rheb	89	85.802	Poecilia_latipinna
ENSAMXG00000029130	-	88	85.802	ENSPMEG00000014302	rheb	89	85.802	Poecilia_mexicana
ENSAMXG00000029130	-	88	85.802	ENSPREG00000010752	rheb	89	85.802	Poecilia_reticulata
ENSAMXG00000029130	-	88	85.802	ENSPNYG00000006192	rheb	88	85.802	Pundamilia_nyererei
ENSAMXG00000029130	-	88	88.272	ENSPNAG00000004728	rheb	88	88.272	Pygocentrus_nattereri
ENSAMXG00000029130	-	88	87.037	ENSSFOG00015023790	rheb	88	87.037	Scleropages_formosus
ENSAMXG00000029130	-	88	85.802	ENSSMAG00000013303	rheb	88	85.802	Scophthalmus_maximus
ENSAMXG00000029130	-	88	80.864	ENSSDUG00000016858	-	88	80.864	Seriola_dumerili
ENSAMXG00000029130	-	88	85.802	ENSSDUG00000009122	rheb	88	85.802	Seriola_dumerili
ENSAMXG00000029130	-	88	85.802	ENSSLDG00000018681	rheb	88	85.802	Seriola_lalandi_dorsalis
ENSAMXG00000029130	-	88	85.802	ENSSPAG00000005867	rheb	88	85.802	Stegastes_partitus
ENSAMXG00000029130	-	88	85.802	ENSTRUG00000004902	rheb	88	85.802	Takifugu_rubripes
ENSAMXG00000029130	-	88	85.802	ENSTNIG00000014591	rheb	88	85.802	Tetraodon_nigroviridis
ENSAMXG00000029130	-	91	83.929	ENSXCOG00000019281	rheb	85	89.677	Xiphophorus_couchianus
ENSAMXG00000029130	-	88	85.802	ENSXMAG00000000735	rheb	89	85.802	Xiphophorus_maculatus