EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000029153 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 1515 bases
Position: chr3:43145893-43147407
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000051867	Exo_endo_phos	PF03372.23	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000032906	-	1515	-	ENSAMXP00000051867	504 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000029153's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000029153's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000029153	-	99	95.626	ENSAMXG00000041658	-	60	95.626
ENSAMXG00000029153	-	81	31.051	ENSAMXG00000035618	-	84	31.051
ENSAMXG00000029153	-	80	31.017	ENSAMXG00000034279	-	69	31.017

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000029153	-	80	40.587	ENSACLG00000004686	-	96	40.587	Astatotilapia_calliptera
ENSAMXG00000029153	-	99	37.378	ENSIPUG00000019854	-	51	37.378	Ictalurus_punctatus
ENSAMXG00000029153	-	51	35.000	ENSIPUG00000013055	-	50	35.000	Ictalurus_punctatus
ENSAMXG00000029153	-	51	37.597	ENSIPUG00000012540	-	58	37.597	Ictalurus_punctatus
ENSAMXG00000029153	-	88	30.926	ENSLACG00000004055	-	60	30.926	Latimeria_chalumnae
ENSAMXG00000029153	-	57	32.292	ENSSFOG00015018010	-	54	32.292	Scleropages_formosus