EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000029161 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 2541 bases
Position: chr14:13462787-13465327
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000029170	zf-C2H2	PF00096.26	1.7e-37	1	7
ENSAMXP00000029170	zf-C2H2	PF00096.26	1.7e-37	2	7
ENSAMXP00000029170	zf-C2H2	PF00096.26	1.7e-37	3	7
ENSAMXP00000029170	zf-C2H2	PF00096.26	1.7e-37	4	7
ENSAMXP00000029170	zf-C2H2	PF00096.26	1.7e-37	5	7
ENSAMXP00000029170	zf-C2H2	PF00096.26	1.7e-37	6	7
ENSAMXP00000029170	zf-C2H2	PF00096.26	1.7e-37	7	7
ENSAMXP00000029170	zf-met	PF12874.7	2.3e-15	1	3
ENSAMXP00000029170	zf-met	PF12874.7	2.3e-15	2	3
ENSAMXP00000029170	zf-met	PF12874.7	2.3e-15	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000035871	-	768	-	ENSAMXP00000029170	255 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000029161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000029161's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000029161	-	80	63.768	ENSAMXG00000026142	-	89	63.768
ENSAMXG00000029161	-	82	56.931	ENSAMXG00000026143	-	95	56.931
ENSAMXG00000029161	-	96	55.155	ENSAMXG00000026144	-	91	55.155
ENSAMXG00000029161	-	80	60.000	ENSAMXG00000043978	-	87	60.000
ENSAMXG00000029161	-	90	60.000	ENSAMXG00000010805	-	94	60.000
ENSAMXG00000029161	-	88	67.598	ENSAMXG00000024978	-	96	67.598
ENSAMXG00000029161	-	87	58.824	ENSAMXG00000010930	-	83	60.294
ENSAMXG00000029161	-	81	60.680	ENSAMXG00000032237	-	92	60.680
ENSAMXG00000029161	-	90	58.382	ENSAMXG00000031496	-	87	58.382
ENSAMXG00000029161	-	82	59.709	ENSAMXG00000035875	-	99	59.709
ENSAMXG00000029161	-	79	62.209	ENSAMXG00000030963	-	64	62.209
ENSAMXG00000029161	-	80	70.588	ENSAMXG00000009776	-	96	70.588
ENSAMXG00000029161	-	90	69.307	ENSAMXG00000041725	-	91	69.307
ENSAMXG00000029161	-	91	64.216	ENSAMXG00000030911	-	64	66.667
ENSAMXG00000029161	-	82	66.234	ENSAMXG00000031009	-	83	66.234
ENSAMXG00000029161	-	80	60.256	ENSAMXG00000032841	-	77	60.256
ENSAMXG00000029161	-	80	69.737	ENSAMXG00000041975	-	80	69.737
ENSAMXG00000029161	-	82	57.955	ENSAMXG00000044107	-	88	57.955
ENSAMXG00000029161	-	79	66.292	ENSAMXG00000033124	-	59	66.292
ENSAMXG00000029161	-	84	62.500	ENSAMXG00000035145	-	63	62.500
ENSAMXG00000029161	-	85	53.774	ENSAMXG00000012604	-	96	53.774
ENSAMXG00000029161	-	80	53.846	ENSAMXG00000038122	-	94	53.448
ENSAMXG00000029161	-	82	56.593	ENSAMXG00000019489	-	86	56.593
ENSAMXG00000029161	-	79	63.710	ENSAMXG00000034402	-	92	63.710
ENSAMXG00000029161	-	79	73.333	ENSAMXG00000033500	-	93	73.333
ENSAMXG00000029161	-	82	37.915	ENSAMXG00000044034	-	58	37.915
ENSAMXG00000029161	-	82	65.049	ENSAMXG00000041128	-	88	65.049
ENSAMXG00000029161	-	84	70.000	ENSAMXG00000035690	-	75	70.000
ENSAMXG00000029161	-	89	58.049	ENSAMXG00000037717	-	94	58.824
ENSAMXG00000029161	-	89	64.706	ENSAMXG00000000353	-	95	64.706
ENSAMXG00000029161	-	89	62.637	ENSAMXG00000038325	-	92	55.155
ENSAMXG00000029161	-	81	58.564	ENSAMXG00000040677	-	85	58.564
ENSAMXG00000029161	-	80	56.186	ENSAMXG00000033013	-	81	56.186
ENSAMXG00000029161	-	87	42.857	ENSAMXG00000041862	-	97	42.574
ENSAMXG00000029161	-	80	61.340	ENSAMXG00000041861	-	92	61.340
ENSAMXG00000029161	-	82	67.157	ENSAMXG00000041865	-	97	67.157
ENSAMXG00000029161	-	80	66.341	ENSAMXG00000043423	-	74	66.341
ENSAMXG00000029161	-	80	63.399	ENSAMXG00000038453	-	82	63.399
ENSAMXG00000029161	-	86	67.805	ENSAMXG00000043251	-	95	67.805
ENSAMXG00000029161	-	91	50.581	ENSAMXG00000013492	-	96	51.471
ENSAMXG00000029161	-	81	66.923	ENSAMXG00000034847	-	84	66.923
ENSAMXG00000029161	-	90	63.804	ENSAMXG00000039016	-	80	63.804
ENSAMXG00000029161	-	82	42.045	ENSAMXG00000039849	snai1b	55	42.045
ENSAMXG00000029161	-	90	58.962	ENSAMXG00000037923	-	99	58.962
ENSAMXG00000029161	-	85	59.804	ENSAMXG00000029960	-	97	59.804
ENSAMXG00000029161	-	95	56.311	ENSAMXG00000039770	-	86	56.311
ENSAMXG00000029161	-	90	65.196	ENSAMXG00000032457	-	94	65.196
ENSAMXG00000029161	-	84	68.493	ENSAMXG00000036762	-	97	68.493
ENSAMXG00000029161	-	84	57.353	ENSAMXG00000033252	-	97	57.353
ENSAMXG00000029161	-	93	56.373	ENSAMXG00000030659	-	86	56.373
ENSAMXG00000029161	-	88	70.253	ENSAMXG00000008613	-	96	70.253
ENSAMXG00000029161	-	80	57.143	ENSAMXG00000031307	-	58	57.143
ENSAMXG00000029161	-	80	63.429	ENSAMXG00000035683	-	98	63.429
ENSAMXG00000029161	-	83	52.667	ENSAMXG00000029660	-	55	52.667
ENSAMXG00000029161	-	82	38.728	ENSAMXG00000029059	-	61	38.728
ENSAMXG00000029161	-	96	43.889	ENSAMXG00000044096	-	86	43.889
ENSAMXG00000029161	-	81	63.366	ENSAMXG00000030530	-	98	63.366
ENSAMXG00000029161	-	96	61.951	ENSAMXG00000040630	-	98	63.576
ENSAMXG00000029161	-	90	69.767	ENSAMXG00000025965	-	94	69.767
ENSAMXG00000029161	-	88	61.275	ENSAMXG00000038324	-	74	61.275
ENSAMXG00000029161	-	82	57.746	ENSAMXG00000037981	-	72	57.746
ENSAMXG00000029161	-	81	66.471	ENSAMXG00000037885	-	96	66.471
ENSAMXG00000029161	-	89	62.745	ENSAMXG00000029828	-	97	62.745
ENSAMXG00000029161	-	80	59.091	ENSAMXG00000044028	-	96	59.701
ENSAMXG00000029161	-	89	63.415	ENSAMXG00000003002	-	96	63.415
ENSAMXG00000029161	-	91	59.024	ENSAMXG00000037143	-	93	59.024
ENSAMXG00000029161	-	90	62.564	ENSAMXG00000025452	-	99	62.564
ENSAMXG00000029161	-	96	62.500	ENSAMXG00000036233	-	93	62.500
ENSAMXG00000029161	-	85	46.903	ENSAMXG00000033299	-	70	46.903
ENSAMXG00000029161	-	81	59.259	ENSAMXG00000034333	-	84	59.259
ENSAMXG00000029161	-	89	65.476	ENSAMXG00000034958	-	91	65.476
ENSAMXG00000029161	-	85	52.778	ENSAMXG00000034857	-	66	52.778
ENSAMXG00000029161	-	79	62.304	ENSAMXG00000031900	-	94	62.304
ENSAMXG00000029161	-	82	56.667	ENSAMXG00000044110	-	87	56.667
ENSAMXG00000029161	-	88	67.157	ENSAMXG00000039879	-	98	67.157
ENSAMXG00000029161	-	92	64.000	ENSAMXG00000039004	-	92	64.000
ENSAMXG00000029161	-	80	58.376	ENSAMXG00000043291	-	64	58.376
ENSAMXG00000029161	-	80	63.043	ENSAMXG00000042167	-	76	63.043
ENSAMXG00000029161	-	80	61.111	ENSAMXG00000039700	-	89	61.111
ENSAMXG00000029161	-	81	65.657	ENSAMXG00000010078	-	87	65.657
ENSAMXG00000029161	-	81	44.242	ENSAMXG00000006669	GFI1	54	44.242
ENSAMXG00000029161	-	82	43.169	ENSAMXG00000041864	prdm5	87	43.169
ENSAMXG00000029161	-	78	62.871	ENSAMXG00000004610	-	96	62.871
ENSAMXG00000029161	-	90	59.524	ENSAMXG00000030742	-	98	59.524
ENSAMXG00000029161	-	81	54.167	ENSAMXG00000037382	-	52	54.167
ENSAMXG00000029161	-	100	55.249	ENSAMXG00000034344	-	87	55.249
ENSAMXG00000029161	-	90	60.000	ENSAMXG00000035437	-	98	60.000
ENSAMXG00000029161	-	87	55.862	ENSAMXG00000038284	-	91	55.789
ENSAMXG00000029161	-	84	62.637	ENSAMXG00000029518	-	58	41.014
ENSAMXG00000029161	-	80	61.935	ENSAMXG00000042774	-	99	61.935
ENSAMXG00000029161	-	90	65.672	ENSAMXG00000039881	-	53	65.672
ENSAMXG00000029161	-	92	61.582	ENSAMXG00000029109	-	86	61.582
ENSAMXG00000029161	-	79	66.355	ENSAMXG00000031646	-	94	66.355
ENSAMXG00000029161	-	85	46.281	ENSAMXG00000042191	zbtb47a	69	46.281
ENSAMXG00000029161	-	96	52.318	ENSAMXG00000035127	-	89	56.818
ENSAMXG00000029161	-	85	64.706	ENSAMXG00000035949	-	78	64.706
ENSAMXG00000029161	-	88	58.824	ENSAMXG00000043019	-	91	58.824
ENSAMXG00000029161	-	79	45.205	ENSAMXG00000034158	scrt2	52	45.205
ENSAMXG00000029161	-	81	64.972	ENSAMXG00000042938	-	88	64.972
ENSAMXG00000029161	-	81	54.146	ENSAMXG00000029783	-	87	54.146
ENSAMXG00000029161	-	81	61.765	ENSAMXG00000017959	-	94	61.765
ENSAMXG00000029161	-	81	71.212	ENSAMXG00000037760	-	95	71.212
ENSAMXG00000029161	-	80	39.216	ENSAMXG00000033001	-	56	39.216
ENSAMXG00000029161	-	82	58.427	ENSAMXG00000042746	-	86	58.427
ENSAMXG00000029161	-	81	67.568	ENSAMXG00000029878	-	92	67.568
ENSAMXG00000029161	-	88	66.176	ENSAMXG00000041404	-	96	68.712
ENSAMXG00000029161	-	82	60.112	ENSAMXG00000038536	-	86	60.112
ENSAMXG00000029161	-	98	61.468	ENSAMXG00000043302	-	86	61.468
ENSAMXG00000029161	-	89	59.538	ENSAMXG00000039408	-	94	59.538
ENSAMXG00000029161	-	79	48.408	ENSAMXG00000007441	-	57	48.408
ENSAMXG00000029161	-	83	64.331	ENSAMXG00000031489	-	92	64.331
ENSAMXG00000029161	-	79	67.157	ENSAMXG00000011804	-	93	67.157
ENSAMXG00000029161	-	90	64.706	ENSAMXG00000007092	-	98	64.706
ENSAMXG00000029161	-	80	66.667	ENSAMXG00000017609	-	74	66.667
ENSAMXG00000029161	-	90	68.156	ENSAMXG00000038636	-	93	68.156
ENSAMXG00000029161	-	89	57.642	ENSAMXG00000036241	-	83	57.642
ENSAMXG00000029161	-	88	65.686	ENSAMXG00000018161	-	95	65.686
ENSAMXG00000029161	-	91	35.417	ENSAMXG00000008771	PRDM15	51	35.323
ENSAMXG00000029161	-	80	69.466	ENSAMXG00000037703	-	81	69.466
ENSAMXG00000029161	-	82	64.615	ENSAMXG00000037709	-	82	64.615
ENSAMXG00000029161	-	82	62.264	ENSAMXG00000032212	-	86	62.264
ENSAMXG00000029161	-	85	46.667	ENSAMXG00000037544	GFI1B	50	46.667
ENSAMXG00000029161	-	81	41.837	ENSAMXG00000035246	-	67	41.837
ENSAMXG00000029161	-	89	63.033	ENSAMXG00000039977	-	89	63.033
ENSAMXG00000029161	-	80	61.765	ENSAMXG00000043541	-	81	61.765
ENSAMXG00000029161	-	80	61.364	ENSAMXG00000042633	-	95	61.364
ENSAMXG00000029161	-	98	58.757	ENSAMXG00000036915	-	97	58.757
ENSAMXG00000029161	-	81	62.360	ENSAMXG00000042593	-	90	62.360
ENSAMXG00000029161	-	95	37.727	ENSAMXG00000024907	znf319b	85	38.785
ENSAMXG00000029161	-	81	62.255	ENSAMXG00000033201	-	94	62.255
ENSAMXG00000029161	-	80	66.452	ENSAMXG00000029178	-	96	66.452
ENSAMXG00000029161	-	89	66.341	ENSAMXG00000031501	-	87	66.341
ENSAMXG00000029161	-	90	61.429	ENSAMXG00000009563	-	91	61.429
ENSAMXG00000029161	-	81	57.895	ENSAMXG00000041721	-	72	57.895
ENSAMXG00000029161	-	91	67.742	ENSAMXG00000039744	-	99	67.742
ENSAMXG00000029161	-	81	59.740	ENSAMXG00000012873	-	96	55.556
ENSAMXG00000029161	-	89	58.824	ENSAMXG00000038280	-	86	58.824
ENSAMXG00000029161	-	85	60.976	ENSAMXG00000036849	-	80	60.976
ENSAMXG00000029161	-	90	66.667	ENSAMXG00000036567	-	78	66.667
ENSAMXG00000029161	-	81	64.706	ENSAMXG00000039432	-	95	64.706
ENSAMXG00000029161	-	82	45.902	ENSAMXG00000034934	-	81	45.902
ENSAMXG00000029161	-	82	48.837	ENSAMXG00000034873	-	81	48.837
ENSAMXG00000029161	-	82	44.706	ENSAMXG00000038235	snai2	52	44.706
ENSAMXG00000029161	-	82	63.816	ENSAMXG00000031794	-	96	63.816
ENSAMXG00000029161	-	82	59.314	ENSAMXG00000001626	-	93	59.314
ENSAMXG00000029161	-	82	58.537	ENSAMXG00000040806	-	92	58.537
ENSAMXG00000029161	-	85	40.000	ENSAMXG00000016921	znf341	55	40.000
ENSAMXG00000029161	-	80	61.386	ENSAMXG00000042784	-	91	61.386
ENSAMXG00000029161	-	80	59.551	ENSAMXG00000041650	-	87	59.551
ENSAMXG00000029161	-	81	60.488	ENSAMXG00000031844	-	93	60.488
ENSAMXG00000029161	-	82	53.093	ENSAMXG00000036257	-	92	53.093
ENSAMXG00000029161	-	80	50.829	ENSAMXG00000043178	-	72	50.829
ENSAMXG00000029161	-	79	68.354	ENSAMXG00000025455	-	98	68.354
ENSAMXG00000029161	-	96	54.795	ENSAMXG00000034096	-	84	54.795
ENSAMXG00000029161	-	90	64.286	ENSAMXG00000041609	-	94	64.286
ENSAMXG00000029161	-	81	62.733	ENSAMXG00000013274	-	91	62.346
ENSAMXG00000029161	-	81	59.512	ENSAMXG00000039752	-	87	59.512
ENSAMXG00000029161	-	80	75.439	ENSAMXG00000035920	-	88	75.439
ENSAMXG00000029161	-	82	50.526	ENSAMXG00000007973	-	97	47.396
ENSAMXG00000029161	-	82	62.338	ENSAMXG00000042275	-	90	62.338
ENSAMXG00000029161	-	90	67.857	ENSAMXG00000035809	-	99	67.857
ENSAMXG00000029161	-	80	58.480	ENSAMXG00000042174	-	92	54.902
ENSAMXG00000029161	-	80	59.903	ENSAMXG00000037326	-	93	61.628
ENSAMXG00000029161	-	79	58.824	ENSAMXG00000036633	-	64	58.824
ENSAMXG00000029161	-	84	66.129	ENSAMXG00000039182	-	66	59.804
ENSAMXG00000029161	-	84	40.714	ENSAMXG00000025761	-	86	40.714
ENSAMXG00000029161	-	88	67.742	ENSAMXG00000009558	-	93	67.742
ENSAMXG00000029161	-	97	32.759	ENSAMXG00000035525	znf646	76	35.135
ENSAMXG00000029161	-	82	39.785	ENSAMXG00000039622	zbtb41	51	39.785
ENSAMXG00000029161	-	90	66.242	ENSAMXG00000040212	-	84	66.242
ENSAMXG00000029161	-	81	65.865	ENSAMXG00000032619	-	95	65.865
ENSAMXG00000029161	-	98	53.659	ENSAMXG00000035286	si:ch1073-224n8.1	83	54.128
ENSAMXG00000029161	-	82	62.745	ENSAMXG00000039162	-	95	62.745
ENSAMXG00000029161	-	90	50.323	ENSAMXG00000012589	-	85	50.323
ENSAMXG00000029161	-	82	53.589	ENSAMXG00000038905	-	87	53.589
ENSAMXG00000029161	-	81	50.838	ENSAMXG00000014745	-	86	50.838

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000029161	-	80	53.636	ENSCPBG00000021487	-	69	53.636	Chrysemys_picta_bellii
ENSAMXG00000029161	-	85	62.903	ENSCPBG00000001421	-	96	62.903	Chrysemys_picta_bellii
ENSAMXG00000029161	-	81	62.838	ENSCPBG00000001272	-	74	58.659	Chrysemys_picta_bellii
ENSAMXG00000029161	-	80	70.000	ENSCPBG00000012976	-	94	55.502	Chrysemys_picta_bellii
ENSAMXG00000029161	-	79	65.000	ENSCPBG00000016841	-	89	59.712	Chrysemys_picta_bellii
ENSAMXG00000029161	-	88	61.074	ENSCPBG00000004990	-	100	61.074	Chrysemys_picta_bellii
ENSAMXG00000029161	-	81	62.903	ENSCPBG00000004030	-	82	60.000	Chrysemys_picta_bellii
ENSAMXG00000029161	-	89	62.097	ENSCPBG00000021479	-	86	62.097	Chrysemys_picta_bellii
ENSAMXG00000029161	-	83	59.843	ENSGAGG00000010833	-	83	58.140	Gopherus_agassizii
ENSAMXG00000029161	-	81	60.784	ENSGAGG00000001645	-	61	60.784	Gopherus_agassizii
ENSAMXG00000029161	-	80	58.000	ENSGAGG00000016529	-	84	58.000	Gopherus_agassizii
ENSAMXG00000029161	-	80	55.195	ENSGAGG00000018445	-	78	55.195	Gopherus_agassizii
ENSAMXG00000029161	-	86	56.548	ENSGAGG00000009272	-	97	58.046	Gopherus_agassizii
ENSAMXG00000029161	-	80	60.156	ENSGAGG00000012452	-	62	60.156	Gopherus_agassizii
ENSAMXG00000029161	-	80	56.459	ENSGAGG00000020134	-	65	56.459	Gopherus_agassizii
ENSAMXG00000029161	-	88	65.217	ENSGAGG00000002214	-	81	65.217	Gopherus_agassizii
ENSAMXG00000029161	-	89	59.722	ENSGAGG00000014356	-	74	59.722	Gopherus_agassizii
ENSAMXG00000029161	-	99	62.222	ENSGAGG00000010324	-	78	62.222	Gopherus_agassizii
ENSAMXG00000029161	-	91	60.667	ENSGAGG00000002179	-	92	60.667	Gopherus_agassizii
ENSAMXG00000029161	-	87	62.722	ENSGAGG00000011487	-	77	62.722	Gopherus_agassizii
ENSAMXG00000029161	-	81	55.429	ENSPSIG00000001026	-	89	60.870	Pelodiscus_sinensis
ENSAMXG00000029161	-	85	54.976	ENSPSIG00000012865	-	70	54.976	Pelodiscus_sinensis
ENSAMXG00000029161	-	81	61.842	ENSPSIG00000009893	-	59	61.842	Pelodiscus_sinensis
ENSAMXG00000029161	-	80	54.726	ENSPSIG00000015465	-	72	54.726	Pelodiscus_sinensis
ENSAMXG00000029161	-	81	53.365	ENSPSIG00000015216	-	78	53.365	Pelodiscus_sinensis
ENSAMXG00000029161	-	81	54.032	ENSPSIG00000000522	-	91	54.032	Pelodiscus_sinensis
ENSAMXG00000029161	-	79	55.978	ENSPSIG00000002569	-	78	55.978	Pelodiscus_sinensis
ENSAMXG00000029161	-	81	53.333	ENSTGUG00000018518	-	100	53.333	Taeniopygia_guttata
ENSAMXG00000029161	-	80	52.500	ENSTGUG00000015260	-	100	52.500	Taeniopygia_guttata
ENSAMXG00000029161	-	81	52.083	ENSTGUG00000014614	-	99	52.083	Taeniopygia_guttata
ENSAMXG00000029161	-	85	64.865	ENSTGUG00000013736	-	99	64.865	Taeniopygia_guttata
ENSAMXG00000029161	-	80	50.485	ENSTGUG00000016781	-	99	50.485	Taeniopygia_guttata
ENSAMXG00000029161	-	81	55.319	ENSTGUG00000018349	-	100	55.319	Taeniopygia_guttata
ENSAMXG00000029161	-	80	56.000	ENSTGUG00000018327	-	100	56.000	Taeniopygia_guttata
ENSAMXG00000029161	-	73	56.410	ENSTGUG00000018542	-	100	56.410	Taeniopygia_guttata
ENSAMXG00000029161	-	81	52.083	ENSTGUG00000018374	-	99	52.083	Taeniopygia_guttata
ENSAMXG00000029161	-	81	52.604	ENSTGUG00000018445	-	92	52.604	Taeniopygia_guttata
ENSAMXG00000029161	-	81	51.705	ENSTGUG00000014888	-	99	51.705	Taeniopygia_guttata
ENSAMXG00000029161	-	80	53.659	ENSTGUG00000016516	-	99	53.659	Taeniopygia_guttata
ENSAMXG00000029161	-	80	56.061	ENSTGUG00000016850	-	99	56.061	Taeniopygia_guttata