EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000029182 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 1173 bases
Position: chr15:30933509-30934681
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000028546	RVT_1	PF00078.27	8.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000039316	-	1173	-	ENSAMXP00000028546	390 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000029182's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000029182's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000029182	-	71	38.636	ENSAMXG00000033786	-	51	38.636
ENSAMXG00000029182	-	71	36.655	ENSAMXG00000038502	-	57	36.655
ENSAMXG00000029182	-	77	30.132	ENSAMXG00000039106	-	53	31.227
ENSAMXG00000029182	-	72	39.373	ENSAMXG00000043469	-	62	39.373
ENSAMXG00000029182	-	60	36.017	ENSAMXG00000031032	-	62	36.017

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000029182	-	64	36.364	ENSAPOG00000008925	-	71	36.364	Acanthochromis_polyacanthus
ENSAMXG00000029182	-	81	32.710	ENSAPEG00000005752	-	67	35.664	Amphiprion_percula
ENSAMXG00000029182	-	57	30.631	ENSACLG00000013847	-	51	30.631	Astatotilapia_calliptera
ENSAMXG00000029182	-	72	34.035	ENSACLG00000009861	-	58	34.035	Astatotilapia_calliptera
ENSAMXG00000029182	-	57	33.032	ENSACLG00000013289	-	65	33.032	Astatotilapia_calliptera
ENSAMXG00000029182	-	77	33.770	ENSACLG00000021935	-	93	33.770	Astatotilapia_calliptera
ENSAMXG00000029182	-	71	34.000	ENSACLG00000006798	-	95	34.000	Astatotilapia_calliptera
ENSAMXG00000029182	-	72	38.676	ENSACLG00000010403	-	92	38.676	Astatotilapia_calliptera
ENSAMXG00000029182	-	76	33.333	ENSACLG00000001380	-	51	33.333	Astatotilapia_calliptera
ENSAMXG00000029182	-	77	35.505	ENSACLG00000006549	-	83	35.505	Astatotilapia_calliptera
ENSAMXG00000029182	-	72	37.895	ENSCPBG00000001119	-	62	38.246	Chrysemys_picta_bellii
ENSAMXG00000029182	-	68	40.149	ENSCPBG00000001687	-	89	40.149	Chrysemys_picta_bellii
ENSAMXG00000029182	-	71	52.158	ENSCVAG00000001415	-	75	52.158	Cyprinodon_variegatus
ENSAMXG00000029182	-	54	39.914	ENSGAFG00000008149	-	82	39.914	Gambusia_affinis
ENSAMXG00000029182	-	68	40.149	ENSGAGG00000022131	-	89	40.149	Gopherus_agassizii
ENSAMXG00000029182	-	67	34.981	ENSGAGG00000022000	-	93	34.981	Gopherus_agassizii
ENSAMXG00000029182	-	59	37.500	ENSHBUG00000009088	-	63	37.500	Haplochromis_burtoni
ENSAMXG00000029182	-	77	34.951	ENSHBUG00000016445	-	57	34.951	Haplochromis_burtoni
ENSAMXG00000029182	-	77	35.738	ENSIPUG00000003645	-	61	35.738	Ictalurus_punctatus
ENSAMXG00000029182	-	72	36.491	ENSKMAG00000007574	-	56	36.491	Kryptolebias_marmoratus
ENSAMXG00000029182	-	72	34.936	ENSKMAG00000010799	-	87	34.936	Kryptolebias_marmoratus
ENSAMXG00000029182	-	68	39.552	ENSLBEG00000003912	-	69	39.552	Labrus_bergylta
ENSAMXG00000029182	-	72	35.069	ENSLACG00000001892	-	83	35.069	Latimeria_chalumnae
ENSAMXG00000029182	-	61	31.250	ENSLACG00000000029	-	66	31.250	Latimeria_chalumnae
ENSAMXG00000029182	-	64	32.031	ENSLACG00000002249	-	96	32.031	Latimeria_chalumnae
ENSAMXG00000029182	-	50	37.879	ENSLACG00000000714	-	98	38.021	Latimeria_chalumnae
ENSAMXG00000029182	-	51	31.683	ENSLOCG00000017292	-	61	31.683	Lepisosteus_oculatus
ENSAMXG00000029182	-	77	36.808	ENSMAMG00000019918	-	50	36.808	Mastacembelus_armatus
ENSAMXG00000029182	-	72	53.929	ENSMAMG00000004646	-	60	53.929	Mastacembelus_armatus
ENSAMXG00000029182	-	72	34.035	ENSMZEG00005023829	-	57	34.035	Maylandia_zebra
ENSAMXG00000029182	-	66	33.588	ENSMALG00000020245	-	96	33.588	Monopterus_albus
ENSAMXG00000029182	-	59	42.489	ENSMALG00000005075	-	73	42.489	Monopterus_albus
ENSAMXG00000029182	-	60	40.678	ENSNBRG00000002791	-	77	40.678	Neolamprologus_brichardi
ENSAMXG00000029182	-	71	35.587	ENSNBRG00000002477	-	83	35.587	Neolamprologus_brichardi
ENSAMXG00000029182	-	61	39.331	ENSONIG00000018991	-	84	39.331	Oreochromis_niloticus
ENSAMXG00000029182	-	69	37.868	ENSORLG00000027231	-	52	37.868	Oryzias_latipes
ENSAMXG00000029182	-	69	42.105	ENSORLG00000022742	-	77	42.105	Oryzias_latipes
ENSAMXG00000029182	-	71	41.727	ENSORLG00000022411	-	78	41.727	Oryzias_latipes
ENSAMXG00000029182	-	65	32.812	ENSORLG00000027869	-	56	32.812	Oryzias_latipes
ENSAMXG00000029182	-	99	35.238	ENSORLG00000029184	-	52	35.238	Oryzias_latipes
ENSAMXG00000029182	-	57	36.323	ENSORLG00020000154	-	55	36.323	Oryzias_latipes_hni
ENSAMXG00000029182	-	71	36.429	ENSORLG00020012706	-	70	36.429	Oryzias_latipes_hni
ENSAMXG00000029182	-	64	45.020	ENSORLG00020021288	-	78	45.020	Oryzias_latipes_hni
ENSAMXG00000029182	-	75	33.446	ENSORLG00020009127	-	57	33.446	Oryzias_latipes_hni
ENSAMXG00000029182	-	72	41.216	ENSORLG00020004454	-	76	41.216	Oryzias_latipes_hni
ENSAMXG00000029182	-	71	39.427	ENSORLG00020016924	-	66	39.427	Oryzias_latipes_hni
ENSAMXG00000029182	-	72	53.929	ENSORLG00020002705	-	89	53.929	Oryzias_latipes_hni
ENSAMXG00000029182	-	83	33.735	ENSORLG00015008138	-	53	35.461	Oryzias_latipes_hsok
ENSAMXG00000029182	-	59	38.793	ENSORLG00015021822	-	62	38.723	Oryzias_latipes_hsok
ENSAMXG00000029182	-	74	42.955	ENSOMEG00000007764	-	99	42.955	Oryzias_melastigma
ENSAMXG00000029182	-	69	37.132	ENSPKIG00000007140	-	63	36.996	Paramormyrops_kingsleyae
ENSAMXG00000029182	-	73	37.380	ENSPKIG00000003982	-	61	37.380	Paramormyrops_kingsleyae
ENSAMXG00000029182	-	54	37.264	ENSPKIG00000019619	-	75	37.264	Paramormyrops_kingsleyae
ENSAMXG00000029182	-	71	37.542	ENSPKIG00000004057	-	68	37.542	Paramormyrops_kingsleyae
ENSAMXG00000029182	-	59	40.343	ENSPSIG00000001816	-	89	39.167	Pelodiscus_sinensis
ENSAMXG00000029182	-	72	39.373	ENSPSIG00000002033	-	88	39.373	Pelodiscus_sinensis
ENSAMXG00000029182	-	63	41.129	ENSPSIG00000014032	-	73	41.129	Pelodiscus_sinensis
ENSAMXG00000029182	-	68	32.472	ENSPSIG00000001136	-	55	32.472	Pelodiscus_sinensis
ENSAMXG00000029182	-	67	40.377	ENSPSIG00000001197	-	66	40.377	Pelodiscus_sinensis
ENSAMXG00000029182	-	67	42.045	ENSPSIG00000001757	-	65	42.045	Pelodiscus_sinensis
ENSAMXG00000029182	-	66	40.613	ENSPSIG00000001249	-	76	40.613	Pelodiscus_sinensis
ENSAMXG00000029182	-	68	42.481	ENSPSIG00000001205	-	58	42.481	Pelodiscus_sinensis
ENSAMXG00000029182	-	71	42.268	ENSPSIG00000000226	-	56	42.034	Pelodiscus_sinensis
ENSAMXG00000029182	-	68	41.418	ENSPSIG00000000193	-	53	41.418	Pelodiscus_sinensis
ENSAMXG00000029182	-	73	39.041	ENSPMEG00000019465	-	65	39.041	Poecilia_mexicana
ENSAMXG00000029182	-	72	54.286	ENSPREG00000005117	-	61	54.286	Poecilia_reticulata
ENSAMXG00000029182	-	81	51.274	ENSPREG00000006650	-	51	55.000	Poecilia_reticulata
ENSAMXG00000029182	-	73	36.426	ENSPNAG00000010299	-	59	36.426	Pygocentrus_nattereri
ENSAMXG00000029182	-	57	35.111	ENSPNAG00000015949	-	59	35.111	Pygocentrus_nattereri
ENSAMXG00000029182	-	72	38.328	ENSPNAG00000009058	-	57	38.328	Pygocentrus_nattereri
ENSAMXG00000029182	-	72	35.647	ENSSFOG00015024061	-	52	35.647	Scleropages_formosus
ENSAMXG00000029182	-	72	37.153	ENSSFOG00015016168	-	66	37.153	Scleropages_formosus
ENSAMXG00000029182	-	73	54.035	ENSSFOG00015015399	-	82	54.035	Scleropages_formosus
ENSAMXG00000029182	-	61	34.583	ENSTRUG00000024970	-	78	34.583	Takifugu_rubripes
ENSAMXG00000029182	-	75	38.333	ENSXMAG00000023507	-	58	38.333	Xiphophorus_maculatus
ENSAMXG00000029182	-	61	37.548	ENSXMAG00000027711	-	78	37.548	Xiphophorus_maculatus