EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000029217 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 4205 bases
Position: chrAPWO02001848.1:5006-9210
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000041955	RRM_1	PF00076.22	2.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000031081	-	318	-	ENSAMXP00000041955	105 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000029217's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000029217's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000029217	-	94	64.646	ENSG00000198000	NOL8	98	64.646	Homo_sapiens
ENSAMXG00000029217	-	82	76.744	ENSAPOG00000008905	-	69	76.744	Acanthochromis_polyacanthus
ENSAMXG00000029217	-	83	79.310	ENSAOCG00000003570	-	96	79.310	Amphiprion_ocellaris
ENSAMXG00000029217	-	77	49.383	ENSAPEG00000020964	-	62	49.383	Amphiprion_percula
ENSAMXG00000029217	-	83	79.310	ENSAPEG00000004400	-	96	79.310	Amphiprion_percula
ENSAMXG00000029217	-	90	64.894	ENSANAG00000033271	NOL8	75	64.894	Aotus_nancymaae
ENSAMXG00000029217	-	90	65.263	ENSCJAG00000039875	NOL8	75	65.263	Callithrix_jacchus
ENSAMXG00000029217	-	90	60.638	ENSCPOG00000031767	-	100	60.638	Cavia_porcellus
ENSAMXG00000029217	-	94	55.556	ENSCCAG00000026399	NOL8	98	55.556	Cebus_capucinus
ENSAMXG00000029217	-	97	54.902	ENSCATG00000038353	-	86	54.902	Cercocebus_atys
ENSAMXG00000029217	-	90	60.638	ENSCGRG00001016459	-	100	60.638	Cricetulus_griseus_chok1gshd
ENSAMXG00000029217	-	90	60.638	ENSCGRG00000016885	-	100	60.638	Cricetulus_griseus_crigri
ENSAMXG00000029217	-	98	60.194	ENSCSEG00000012803	-	100	64.894	Cynoglossus_semilaevis
ENSAMXG00000029217	-	82	75.581	ENSCVAG00000009871	-	89	75.581	Cyprinodon_variegatus
ENSAMXG00000029217	-	90	63.830	ENSDORG00000025458	-	100	63.830	Dipodomys_ordii
ENSAMXG00000029217	-	99	58.654	ENSEASG00005013182	NOL8	80	58.654	Equus_asinus_asinus
ENSAMXG00000029217	-	99	57.692	ENSFCAG00000000818	NOL8	81	57.692	Felis_catus
ENSAMXG00000029217	-	100	54.783	ENSFDAG00000016216	-	100	62.766	Fukomys_damarensis
ENSAMXG00000029217	-	87	75.824	ENSFHEG00000017935	-	94	75.824	Fundulus_heteroclitus
ENSAMXG00000029217	-	87	71.429	ENSGAFG00000001708	-	83	71.429	Gambusia_affinis
ENSAMXG00000029217	-	79	50.602	ENSGAGG00000002268	-	82	50.602	Gopherus_agassizii
ENSAMXG00000029217	-	64	58.209	ENSGAGG00000001685	-	62	58.209	Gopherus_agassizii
ENSAMXG00000029217	-	57	61.667	ENSGAGG00000010376	-	76	61.667	Gopherus_agassizii
ENSAMXG00000029217	-	64	59.701	ENSGAGG00000002259	-	77	59.701	Gopherus_agassizii
ENSAMXG00000029217	-	58	59.016	ENSGAGG00000002984	-	79	59.016	Gopherus_agassizii
ENSAMXG00000029217	-	79	54.217	ENSGAGG00000004839	-	82	54.217	Gopherus_agassizii
ENSAMXG00000029217	-	88	59.783	ENSGGOG00000023838	-	91	59.783	Gorilla_gorilla
ENSAMXG00000029217	-	87	57.143	ENSHGLG00000001400	-	55	57.143	Heterocephalus_glaber_female
ENSAMXG00000029217	-	90	61.702	ENSHGLG00000010060	-	100	61.702	Heterocephalus_glaber_female
ENSAMXG00000029217	-	87	57.143	ENSHGLG00100012643	-	55	57.143	Heterocephalus_glaber_male
ENSAMXG00000029217	-	100	57.143	ENSHGLG00100012858	-	100	61.702	Heterocephalus_glaber_male
ENSAMXG00000029217	-	100	53.913	ENSHGLG00100002570	-	87	53.913	Heterocephalus_glaber_male
ENSAMXG00000029217	-	83	68.966	ENSHCOG00000012856	nol8	73	68.966	Hippocampus_comes
ENSAMXG00000029217	-	92	59.794	ENSJJAG00000011518	-	75	59.794	Jaculus_jaculus
ENSAMXG00000029217	-	94	64.646	ENSMFAG00000034500	NOL8	98	64.646	Macaca_fascicularis
ENSAMXG00000029217	-	90	60.638	ENSMFAG00000031716	-	79	57.609	Macaca_fascicularis
ENSAMXG00000029217	-	90	67.021	ENSMMUG00000004629	NOL8	75	64.948	Macaca_mulatta
ENSAMXG00000029217	-	94	64.646	ENSMNEG00000036927	NOL8	98	64.646	Macaca_nemestrina
ENSAMXG00000029217	-	90	59.574	ENSMNEG00000005430	-	79	56.522	Macaca_nemestrina
ENSAMXG00000029217	-	94	63.636	ENSMLEG00000037641	NOL8	98	63.636	Mandrillus_leucophaeus
ENSAMXG00000029217	-	78	57.317	ENSMLEG00000035584	-	72	57.317	Mandrillus_leucophaeus
ENSAMXG00000029217	-	90	73.404	ENSMAMG00000000989	-	100	73.404	Mastacembelus_armatus
ENSAMXG00000029217	-	90	60.638	ENSMAUG00000008173	-	100	60.638	Mesocricetus_auratus
ENSAMXG00000029217	-	90	61.702	ENSMOCG00000008757	-	100	61.702	Microtus_ochrogaster
ENSAMXG00000029217	-	83	75.862	ENSMMOG00000013534	-	86	75.862	Mola_mola
ENSAMXG00000029217	-	90	71.277	ENSMALG00000022669	-	97	71.277	Monopterus_albus
ENSAMXG00000029217	-	90	62.766	ENSMUSG00000021392	Nol8	100	62.366	Mus_musculus
ENSAMXG00000029217	-	90	64.894	ENSNGAG00000021592	-	100	64.894	Nannospalax_galili
ENSAMXG00000029217	-	89	71.579	ENSNBRG00000012679	-	73	71.579	Neolamprologus_brichardi
ENSAMXG00000029217	-	89	54.839	ENSNLEG00000028854	-	84	54.839	Nomascus_leucogenys
ENSAMXG00000029217	-	90	65.957	ENSNLEG00000016357	NOL8	93	65.957	Nomascus_leucogenys
ENSAMXG00000029217	-	94	63.636	ENSPPAG00000002204	NOL8	98	63.636	Pan_paniscus
ENSAMXG00000029217	-	99	57.692	ENSPPRG00000008693	NOL8	81	57.692	Panthera_pardus
ENSAMXG00000029217	-	99	57.692	ENSPTIG00000015402	NOL8	81	57.692	Panthera_tigris_altaica
ENSAMXG00000029217	-	94	64.646	ENSPTRG00000021109	NOL8	98	64.646	Pan_troglodytes
ENSAMXG00000029217	-	94	64.646	ENSPANG00000024725	NOL8	98	64.646	Papio_anubis
ENSAMXG00000029217	-	90	61.702	ENSPANG00000031553	-	62	50.667	Papio_anubis
ENSAMXG00000029217	-	90	60.638	ENSPANG00000033194	-	88	60.638	Papio_anubis
ENSAMXG00000029217	-	82	70.930	ENSPMGG00000014670	-	67	70.930	Periophthalmus_magnuspinnatus
ENSAMXG00000029217	-	90	62.766	ENSPEMG00000012756	Nol8	100	62.766	Peromyscus_maniculatus_bairdii
ENSAMXG00000029217	-	86	74.444	ENSPLAG00000008235	-	97	74.444	Poecilia_latipinna
ENSAMXG00000029217	-	86	74.444	ENSPMEG00000006567	-	97	74.444	Poecilia_mexicana
ENSAMXG00000029217	-	87	72.527	ENSPREG00000010175	-	94	72.527	Poecilia_reticulata
ENSAMXG00000029217	-	85	73.626	ENSPNYG00000002021	-	85	73.626	Pundamilia_nyererei
ENSAMXG00000029217	-	90	60.638	ENSRBIG00000011855	-	84	60.638	Rhinopithecus_bieti
ENSAMXG00000029217	-	94	62.626	ENSRROG00000043673	NOL8	98	62.626	Rhinopithecus_roxellana
ENSAMXG00000029217	-	90	58.511	ENSRROG00000033368	-	84	58.511	Rhinopithecus_roxellana
ENSAMXG00000029217	-	94	62.626	ENSSBOG00000024228	NOL8	98	62.626	Saimiri_boliviensis_boliviensis
ENSAMXG00000029217	-	85	70.787	ENSSMAG00000004064	-	94	70.787	Scophthalmus_maximus
ENSAMXG00000029217	-	89	73.118	ENSSLDG00000007021	-	97	73.118	Seriola_lalandi_dorsalis
ENSAMXG00000029217	-	87	69.231	ENSTRUG00000009278	nol8	77	72.414	Takifugu_rubripes
ENSAMXG00000029217	-	87	70.330	ENSXMAG00000027913	-	83	70.330	Xiphophorus_maculatus