EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000029265 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 2787 bases
Position: chr16:14691240-14694026
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000043110	RVT_1	PF00078.27	3.3e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000037728	-	2787	-	ENSAMXP00000043110	928 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000029265's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000029265's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000029265	-	65	30.669	ENSAMXG00000030359	-	88	30.669
ENSAMXG00000029265	-	57	30.331	ENSAMXG00000030246	-	75	30.331
ENSAMXG00000029265	-	53	31.028	ENSAMXG00000037974	-	94	30.815

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000029265	-	53	43.600	ENSACLG00000006988	-	74	43.600	Astatotilapia_calliptera
ENSAMXG00000029265	-	79	41.026	ENSACLG00000009813	-	85	41.026	Astatotilapia_calliptera
ENSAMXG00000029265	-	52	30.285	ENSLBEG00000018374	-	73	30.612	Labrus_bergylta
ENSAMXG00000029265	-	57	30.684	ENSMALG00000020948	-	75	30.712	Monopterus_albus
ENSAMXG00000029265	-	98	38.519	ENSORLG00000025129	-	82	38.519	Oryzias_latipes
ENSAMXG00000029265	-	59	39.820	ENSORLG00000024294	-	97	40.141	Oryzias_latipes
ENSAMXG00000029265	-	98	38.627	ENSORLG00000024201	-	82	38.627	Oryzias_latipes
ENSAMXG00000029265	-	54	30.754	ENSORLG00000030445	-	74	30.784	Oryzias_latipes
ENSAMXG00000029265	-	85	44.431	ENSORLG00000023054	-	72	44.431	Oryzias_latipes
ENSAMXG00000029265	-	82	30.346	ENSORLG00000030276	-	81	30.346	Oryzias_latipes
ENSAMXG00000029265	-	82	36.316	ENSORLG00020003695	-	82	36.316	Oryzias_latipes_hni
ENSAMXG00000029265	-	73	40.529	ENSORLG00020002955	-	88	40.529	Oryzias_latipes_hni
ENSAMXG00000029265	-	88	38.590	ENSORLG00020013338	-	98	38.590	Oryzias_latipes_hni
ENSAMXG00000029265	-	67	45.151	ENSORLG00015005330	-	99	45.151	Oryzias_latipes_hsok
ENSAMXG00000029265	-	57	30.036	ENSOMEG00000012000	-	97	30.036	Oryzias_melastigma
ENSAMXG00000029265	-	93	40.741	ENSOMEG00000015999	-	79	40.920	Oryzias_melastigma
ENSAMXG00000029265	-	87	42.822	ENSOMEG00000007525	-	85	42.662	Oryzias_melastigma