EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000029387 (Gene tree)
Gene ID: 103040761
Gene Symbol: larp6a
Alias: acheron|achn|fi75f12|larp6|wu:fi75f12|zgc:66107
Full Name: La ribonucleoprotein domain family member 6
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 10949 bases
Position: chr18:29503028-29513976
Accession: 103040761
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000037264	La	PF05383.17	7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000030969	-	1959	XM_007251848	ENSAMXP00000037264	652 (aa)	XP_007251910	UPI000BBD8990

Gene Model

Click here to download ENSAMXG00000029387's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000029387's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000029387	larp6a	64	39.954	ENSAMXG00000018956	larp6b	89	39.726
ENSAMXG00000029387	larp6a	63	39.480	ENSAMXG00000036816	-	92	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000029387	larp6a	68	57.895	ENSG00000166173	LARP6	90	57.081	Homo_sapiens
ENSAMXG00000029387	larp6a	100	62.622	ENSAPOG00000021773	larp6a	77	80.325	Acanthochromis_polyacanthus
ENSAMXG00000029387	larp6a	65	59.410	ENSAMEG00000008897	LARP6	99	58.503	Ailuropoda_melanoleuca
ENSAMXG00000029387	larp6a	74	80.933	ENSACIG00000005166	larp6a	95	80.325	Amphilophus_citrinellus
ENSAMXG00000029387	larp6a	100	62.726	ENSAOCG00000002284	larp6a	77	80.364	Amphiprion_ocellaris
ENSAMXG00000029387	larp6a	74	80.769	ENSAPEG00000008077	larp6a	93	80.364	Amphiprion_percula
ENSAMXG00000029387	larp6a	79	79.435	ENSATEG00000004018	larp6a	73	78.629	Anabas_testudineus
ENSAMXG00000029387	larp6a	65	58.810	ENSAPLG00000009914	LARP6	99	58.352	Anas_platyrhynchos
ENSAMXG00000029387	larp6a	65	59.485	ENSACAG00000008613	LARP6	97	59.016	Anolis_carolinensis
ENSAMXG00000029387	larp6a	68	58.114	ENSANAG00000024860	LARP6	90	57.298	Aotus_nancymaae
ENSAMXG00000029387	larp6a	100	63.004	ENSACLG00000018561	larp6a	67	80.122	Astatotilapia_calliptera
ENSAMXG00000029387	larp6a	68	58.425	ENSBTAG00000003915	LARP6	97	56.112	Bos_taurus
ENSAMXG00000029387	larp6a	73	56.137	ENSCJAG00000046236	-	97	54.059	Callithrix_jacchus
ENSAMXG00000029387	larp6a	68	57.895	ENSCJAG00000018642	-	90	57.081	Callithrix_jacchus
ENSAMXG00000029387	larp6a	65	58.957	ENSCAFG00000017616	LARP6	99	58.050	Canis_familiaris
ENSAMXG00000029387	larp6a	73	56.137	ENSCAFG00020007296	LARP6	98	55.936	Canis_lupus_dingo
ENSAMXG00000029387	larp6a	68	58.425	ENSCHIG00000013742	LARP6	97	56.112	Capra_hircus
ENSAMXG00000029387	larp6a	65	57.823	ENSTSYG00000028124	LARP6	87	56.916	Carlito_syrichta
ENSAMXG00000029387	larp6a	65	57.403	ENSCAPG00000015452	LARP6	99	57.175	Cavia_aperea
ENSAMXG00000029387	larp6a	73	55.040	ENSCPOG00000022687	LARP6	89	56.304	Cavia_porcellus
ENSAMXG00000029387	larp6a	73	56.566	ENSCCAG00000036320	LARP6	97	55.847	Cebus_capucinus
ENSAMXG00000029387	larp6a	68	57.895	ENSCATG00000042432	LARP6	90	57.081	Cercocebus_atys
ENSAMXG00000029387	larp6a	68	57.112	ENSCLAG00000007893	LARP6	89	56.522	Chinchilla_lanigera
ENSAMXG00000029387	larp6a	68	57.895	ENSCSAG00000013672	LARP6	90	57.081	Chlorocebus_sabaeus
ENSAMXG00000029387	larp6a	67	57.942	ENSCHOG00000003318	LARP6	90	57.111	Choloepus_hoffmanni
ENSAMXG00000029387	larp6a	68	59.471	ENSCPBG00000010771	LARP6	85	59.031	Chrysemys_picta_bellii
ENSAMXG00000029387	larp6a	65	58.503	ENSCANG00000025833	LARP6	100	57.596	Colobus_angolensis_palliatus
ENSAMXG00000029387	larp6a	68	57.549	ENSCGRG00001024472	Larp6	97	56.225	Cricetulus_griseus_chok1gshd
ENSAMXG00000029387	larp6a	68	57.549	ENSCGRG00000004527	Larp6	97	56.225	Cricetulus_griseus_crigri
ENSAMXG00000029387	larp6a	77	77.282	ENSCSEG00000011196	larp6a	75	76.505	Cynoglossus_semilaevis
ENSAMXG00000029387	larp6a	100	63.727	ENSCVAG00000009605	larp6a	71	79.352	Cyprinodon_variegatus
ENSAMXG00000029387	larp6a	75	81.489	ENSDARG00000005355	larp6a	99	86.207	Danio_rerio
ENSAMXG00000029387	larp6a	73	56.098	ENSDNOG00000042993	LARP6	98	55.378	Dasypus_novemcinctus
ENSAMXG00000029387	larp6a	73	54.858	ENSDORG00000023910	Larp6	97	56.364	Dipodomys_ordii
ENSAMXG00000029387	larp6a	51	60.731	ENSETEG00000020390	LARP6	75	56.800	Echinops_telfairi
ENSAMXG00000029387	larp6a	68	58.206	ENSEASG00005005490	LARP6	71	56.024	Equus_asinus_asinus
ENSAMXG00000029387	larp6a	69	57.388	ENSECAG00000014190	LARP6	100	56.170	Equus_caballus
ENSAMXG00000029387	larp6a	100	62.238	ENSELUG00000007341	larp6a	79	79.879	Esox_lucius
ENSAMXG00000029387	larp6a	68	57.768	ENSFCAG00000001361	LARP6	90	56.957	Felis_catus
ENSAMXG00000029387	larp6a	68	58.425	ENSFALG00000012389	LARP6	95	58.225	Ficedula_albicollis
ENSAMXG00000029387	larp6a	66	57.788	ENSFDAG00000019994	LARP6	84	57.562	Fukomys_damarensis
ENSAMXG00000029387	larp6a	100	62.361	ENSFHEG00000010312	larp6a	77	79.555	Fundulus_heteroclitus
ENSAMXG00000029387	larp6a	68	58.811	ENSGALG00000004046	LARP6	89	58.720	Gallus_gallus
ENSAMXG00000029387	larp6a	100	61.878	ENSGAFG00000009426	larp6a	77	78.947	Gambusia_affinis
ENSAMXG00000029387	larp6a	66	81.364	ENSGACG00000014622	larp6a	99	81.364	Gasterosteus_aculeatus
ENSAMXG00000029387	larp6a	62	57.524	ENSGAGG00000010802	LARP6	58	57.039	Gopherus_agassizii
ENSAMXG00000029387	larp6a	65	58.503	ENSGGOG00000024151	LARP6	100	57.596	Gorilla_gorilla
ENSAMXG00000029387	larp6a	100	63.004	ENSHBUG00000021014	larp6a	67	79.919	Haplochromis_burtoni
ENSAMXG00000029387	larp6a	68	58.425	ENSHGLG00000015112	LARP6	100	55.019	Heterocephalus_glaber_female
ENSAMXG00000029387	larp6a	65	59.050	ENSHGLG00100013159	LARP6	100	58.371	Heterocephalus_glaber_male
ENSAMXG00000029387	larp6a	74	79.796	ENSHCOG00000001241	larp6a	93	79.388	Hippocampus_comes
ENSAMXG00000029387	larp6a	100	69.174	ENSIPUG00000010187	larp6	73	83.669	Ictalurus_punctatus
ENSAMXG00000029387	larp6a	68	35.650	ENSIPUG00000002828	-	96	38.605	Ictalurus_punctatus
ENSAMXG00000029387	larp6a	70	56.667	ENSSTOG00000024279	LARP6	96	56.739	Ictidomys_tridecemlineatus
ENSAMXG00000029387	larp6a	68	57.768	ENSJJAG00000011013	Larp6	98	54.949	Jaculus_jaculus
ENSAMXG00000029387	larp6a	74	79.757	ENSKMAG00000001702	larp6a	67	79.150	Kryptolebias_marmoratus
ENSAMXG00000029387	larp6a	76	75.000	ENSLBEG00000000170	larp6a	98	74.570	Labrus_bergylta
ENSAMXG00000029387	larp6a	72	63.825	ENSLACG00000018706	LARP6	89	62.994	Latimeria_chalumnae
ENSAMXG00000029387	larp6a	63	44.444	ENSLACG00000002786	-	95	45.667	Latimeria_chalumnae
ENSAMXG00000029387	larp6a	100	60.820	ENSLOCG00000014592	larp6a	72	74.494	Lepisosteus_oculatus
ENSAMXG00000029387	larp6a	64	42.922	ENSLOCG00000008547	-	81	44.749	Lepisosteus_oculatus
ENSAMXG00000029387	larp6a	67	59.341	ENSLAFG00000016343	LARP6	98	58.515	Loxodonta_africana
ENSAMXG00000029387	larp6a	68	57.895	ENSMFAG00000035507	LARP6	98	57.081	Macaca_fascicularis
ENSAMXG00000029387	larp6a	68	57.895	ENSMMUG00000004429	LARP6	92	57.081	Macaca_mulatta
ENSAMXG00000029387	larp6a	68	57.895	ENSMNEG00000045335	LARP6	90	57.081	Macaca_nemestrina
ENSAMXG00000029387	larp6a	65	58.503	ENSMLEG00000038587	LARP6	100	57.596	Mandrillus_leucophaeus
ENSAMXG00000029387	larp6a	100	61.370	ENSMAMG00000005261	larp6a	77	79.032	Mastacembelus_armatus
ENSAMXG00000029387	larp6a	100	63.143	ENSMZEG00005005774	larp6a	67	80.122	Maylandia_zebra
ENSAMXG00000029387	larp6a	65	60.183	ENSMGAG00000005077	LARP6	99	60.092	Meleagris_gallopavo
ENSAMXG00000029387	larp6a	68	57.768	ENSMAUG00000018486	Larp6	97	55.823	Mesocricetus_auratus
ENSAMXG00000029387	larp6a	68	57.298	ENSMICG00000011234	LARP6	91	56.250	Microcebus_murinus
ENSAMXG00000029387	larp6a	68	58.114	ENSMOCG00000010492	Larp6	99	54.795	Microtus_ochrogaster
ENSAMXG00000029387	larp6a	75	78.131	ENSMMOG00000016284	larp6a	96	77.336	Mola_mola
ENSAMXG00000029387	larp6a	68	55.727	ENSMODG00000009034	LARP6	91	54.115	Monodelphis_domestica
ENSAMXG00000029387	larp6a	72	79.876	ENSMALG00000014439	larp6a	90	79.253	Monopterus_albus
ENSAMXG00000029387	larp6a	68	57.987	MGP_CAROLIEiJ_G0032314	Larp6	90	57.391	Mus_caroli
ENSAMXG00000029387	larp6a	68	57.768	ENSMUSG00000034839	Larp6	90	57.174	Mus_musculus
ENSAMXG00000029387	larp6a	68	57.768	MGP_PahariEiJ_G0015180	Larp6	90	57.174	Mus_pahari
ENSAMXG00000029387	larp6a	68	57.987	MGP_SPRETEiJ_G0033452	Larp6	90	57.391	Mus_spretus
ENSAMXG00000029387	larp6a	66	58.465	ENSMPUG00000017086	LARP6	99	57.562	Mustela_putorius_furo
ENSAMXG00000029387	larp6a	67	57.802	ENSMLUG00000010319	LARP6	97	55.734	Myotis_lucifugus
ENSAMXG00000029387	larp6a	68	57.768	ENSNGAG00000014238	Larp6	100	54.776	Nannospalax_galili
ENSAMXG00000029387	larp6a	74	80.730	ENSNBRG00000008120	larp6a	93	80.122	Neolamprologus_brichardi
ENSAMXG00000029387	larp6a	73	56.452	ENSNLEG00000013691	LARP6	97	55.645	Nomascus_leucogenys
ENSAMXG00000029387	larp6a	57	61.017	ENSMEUG00000002270	LARP6	95	48.665	Notamacropus_eugenii
ENSAMXG00000029387	larp6a	55	56.131	ENSOPRG00000004868	-	99	55.586	Ochotona_princeps
ENSAMXG00000029387	larp6a	67	57.273	ENSODEG00000015958	LARP6	95	55.328	Octodon_degus
ENSAMXG00000029387	larp6a	74	80.606	ENSONIG00000002901	larp6a	93	80.000	Oreochromis_niloticus
ENSAMXG00000029387	larp6a	62	60.097	ENSOCUG00000009306	LARP6	97	58.255	Oryctolagus_cuniculus
ENSAMXG00000029387	larp6a	72	78.631	ENSORLG00000014256	larp6a	92	78.423	Oryzias_latipes
ENSAMXG00000029387	larp6a	100	61.345	ENSORLG00020019657	larp6a	78	78.068	Oryzias_latipes_hni
ENSAMXG00000029387	larp6a	100	61.625	ENSORLG00015017915	larp6a	78	78.068	Oryzias_latipes_hsok
ENSAMXG00000029387	larp6a	100	61.173	ENSOMEG00000017049	larp6a	70	77.867	Oryzias_melastigma
ENSAMXG00000029387	larp6a	73	55.466	ENSOGAG00000000522	LARP6	90	57.174	Otolemur_garnettii
ENSAMXG00000029387	larp6a	66	58.916	ENSOARG00000018750	LARP6	99	58.014	Ovis_aries
ENSAMXG00000029387	larp6a	65	58.503	ENSPPAG00000031247	LARP6	100	57.596	Pan_paniscus
ENSAMXG00000029387	larp6a	68	57.549	ENSPPRG00000011282	LARP6	90	56.739	Panthera_pardus
ENSAMXG00000029387	larp6a	65	58.145	ENSPTIG00000015318	LARP6	86	57.240	Panthera_tigris_altaica
ENSAMXG00000029387	larp6a	68	57.895	ENSPTRG00000007234	LARP6	90	57.081	Pan_troglodytes
ENSAMXG00000029387	larp6a	68	57.895	ENSPANG00000016362	LARP6	90	57.081	Papio_anubis
ENSAMXG00000029387	larp6a	100	58.759	ENSPKIG00000020103	larp6a	89	74.587	Paramormyrops_kingsleyae
ENSAMXG00000029387	larp6a	78	70.795	ENSPKIG00000004511	LARP6	83	71.004	Paramormyrops_kingsleyae
ENSAMXG00000029387	larp6a	74	79.960	ENSPMGG00000006958	larp6a	96	79.555	Periophthalmus_magnuspinnatus
ENSAMXG00000029387	larp6a	73	55.422	ENSPEMG00000012909	Larp6	97	55.221	Peromyscus_maniculatus_bairdii
ENSAMXG00000029387	larp6a	68	55.799	ENSPCIG00000020765	LARP6	91	53.988	Phascolarctos_cinereus
ENSAMXG00000029387	larp6a	76	77.210	ENSPFOG00000014175	larp6a	93	78.629	Poecilia_formosa
ENSAMXG00000029387	larp6a	98	77.515	ENSPLAG00000011105	larp6a	77	78.947	Poecilia_latipinna
ENSAMXG00000029387	larp6a	98	77.909	ENSPMEG00000011085	larp6a	77	79.352	Poecilia_mexicana
ENSAMXG00000029387	larp6a	100	61.602	ENSPREG00000008067	larp6a	77	78.745	Poecilia_reticulata
ENSAMXG00000029387	larp6a	68	57.895	ENSPPYG00000006604	LARP6	90	57.081	Pongo_abelii
ENSAMXG00000029387	larp6a	69	57.204	ENSPCOG00000022934	LARP6	91	56.344	Propithecus_coquereli
ENSAMXG00000029387	larp6a	67	58.462	ENSPVAG00000005618	LARP6	89	57.860	Pteropus_vampyrus
ENSAMXG00000029387	larp6a	74	80.730	ENSPNYG00000009835	larp6a	93	80.122	Pundamilia_nyererei
ENSAMXG00000029387	larp6a	98	84.144	ENSPNAG00000017966	larp6a	87	90.659	Pygocentrus_nattereri
ENSAMXG00000029387	larp6a	68	58.553	ENSRNOG00000012438	Larp6	97	56.338	Rattus_norvegicus
ENSAMXG00000029387	larp6a	72	56.432	ENSRBIG00000032902	LARP6	87	57.692	Rhinopithecus_bieti
ENSAMXG00000029387	larp6a	68	57.895	ENSRROG00000043074	LARP6	90	57.081	Rhinopithecus_roxellana
ENSAMXG00000029387	larp6a	65	58.730	ENSSBOG00000024190	LARP6	100	57.823	Saimiri_boliviensis_boliviensis
ENSAMXG00000029387	larp6a	65	56.279	ENSSHAG00000018495	LARP6	97	55.944	Sarcophilus_harrisii
ENSAMXG00000029387	larp6a	66	77.201	ENSSFOG00015023268	larp6a	98	70.172	Scleropages_formosus
ENSAMXG00000029387	larp6a	74	72.008	ENSSFOG00015002254	LARP6	99	69.070	Scleropages_formosus
ENSAMXG00000029387	larp6a	100	61.732	ENSSMAG00000009953	larp6a	69	78.947	Scophthalmus_maximus
ENSAMXG00000029387	larp6a	100	62.639	ENSSDUG00000007438	larp6a	80	76.346	Seriola_dumerili
ENSAMXG00000029387	larp6a	100	62.031	ENSSLDG00000016647	larp6a	78	76.346	Seriola_lalandi_dorsalis
ENSAMXG00000029387	larp6a	66	58.447	ENSSPUG00000011312	LARP6	99	58.219	Sphenodon_punctatus
ENSAMXG00000029387	larp6a	100	62.535	ENSSPAG00000020502	larp6a	77	80.162	Stegastes_partitus
ENSAMXG00000029387	larp6a	67	59.121	ENSSSCG00000004974	LARP6	89	58.297	Sus_scrofa
ENSAMXG00000029387	larp6a	65	58.716	ENSTGUG00000005808	LARP6	98	59.112	Taeniopygia_guttata
ENSAMXG00000029387	larp6a	100	62.358	ENSTRUG00000003151	larp6a	73	76.040	Takifugu_rubripes
ENSAMXG00000029387	larp6a	74	75.460	ENSTNIG00000011926	larp6a	98	75.460	Tetraodon_nigroviridis
ENSAMXG00000029387	larp6a	65	57.273	ENSTBEG00000015077	LARP6	99	57.045	Tupaia_belangeri
ENSAMXG00000029387	larp6a	69	57.296	ENSUAMG00000010467	LARP6	88	57.082	Ursus_americanus
ENSAMXG00000029387	larp6a	65	58.730	ENSVVUG00000015227	LARP6	99	56.061	Vulpes_vulpes
ENSAMXG00000029387	larp6a	73	61.983	ENSXETG00000020340	larp6	93	60.537	Xenopus_tropicalis
ENSAMXG00000029387	larp6a	74	79.513	ENSXCOG00000012654	larp6a	98	78.702	Xiphophorus_couchianus
ENSAMXG00000029387	larp6a	100	60.924	ENSXMAG00000021015	larp6a	76	77.318	Xiphophorus_maculatus