EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAMXG00000029518 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Minus strand
Length
7118 bases
Position
chrAPWO02001416.1:12412-19529
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000043553zf-C2H2PF00096.267.7e-3214
ENSAMXP00000043553zf-C2H2PF00096.267.7e-3224
ENSAMXP00000043553zf-C2H2PF00096.267.7e-3234
ENSAMXP00000043553zf-C2H2PF00096.267.7e-3244
ENSAMXP00000043553zf-metPF12874.72.3e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000057440-6776-ENSAMXP00000043553386 (aa)--
Gene Model
Click here to download ENSAMXG00000029518's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000029518's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAMXG00000029518-5552.174ENSAMXG00000038122-9356.410
ENSAMXG00000029518-5259.000ENSAMXG00000043251-9557.868
ENSAMXG00000029518-7044.898ENSAMXG00000030659-8644.898
ENSAMXG00000029518-7160.000ENSAMXG00000025452-9960.000
ENSAMXG00000029518-5260.000ENSAMXG00000038636-9059.596
ENSAMXG00000029518-5450.000ENSAMXG00000042746-9050.000
ENSAMXG00000029518-7348.259ENSAMXG00000036915-9446.296
ENSAMXG00000029518-6042.857ENSAMXG00000038905-9442.857
ENSAMXG00000029518-5366.667ENSAMXG00000044107-8766.667
ENSAMXG00000029518-7967.005ENSAMXG00000030911-9467.005
ENSAMXG00000029518-5663.333ENSAMXG00000043541-8063.333
ENSAMXG00000029518-7082.418ENSAMXG00000035690-8782.418
ENSAMXG00000029518-5854.701ENSAMXG00000013274-9058.209
ENSAMXG00000029518-6250.980ENSAMXG00000035875-9970.787
ENSAMXG00000029518-5249.749ENSAMXG00000034402-9147.594
ENSAMXG00000029518-5339.796ENSAMXG00000012589-7539.796
ENSAMXG00000029518-5357.500ENSAMXG00000034873-8457.500
ENSAMXG00000029518-6145.872ENSAMXG00000033201-9452.688
ENSAMXG00000029518-5168.116ENSAMXG00000003002-8768.116
ENSAMXG00000029518-5843.719ENSAMXG00000038284-9243.719
ENSAMXG00000029518-6269.565ENSAMXG00000038280-8869.565
ENSAMXG00000029518-5244.670ENSAMXG00000032237-9244.670
ENSAMXG00000029518-5855.484ENSAMXG00000036849-8955.484
ENSAMXG00000029518-7052.381ENSAMXG00000040806-9558.140
ENSAMXG00000029518-7162.667ENSAMXG00000030963-9662.667
ENSAMXG00000029518-5257.895ENSAMXG00000040212-7356.383
ENSAMXG00000029518-5162.162ENSAMXG00000035286si:ch1073-224n8.18956.098
ENSAMXG00000029518-5936.957ENSAMXG00000014745-8136.082
ENSAMXG00000029518-5386.047ENSAMXG00000009558-9461.386
ENSAMXG00000029518-5257.500ENSAMXG00000042938-9464.948
ENSAMXG00000029518-5451.685ENSAMXG00000007973-9644.086
ENSAMXG00000029518-6772.222ENSAMXG00000007092-10072.222
ENSAMXG00000029518-5350.000ENSAMXG00000015228-5150.000
ENSAMXG00000029518-5352.764ENSAMXG00000030742-9850.000
ENSAMXG00000029518-5450.000ENSAMXG00000038536-9050.000
ENSAMXG00000029518-5274.194ENSAMXG00000040677-8448.168
ENSAMXG00000029518-5952.000ENSAMXG00000029828-9754.872
ENSAMXG00000029518-6858.291ENSAMXG00000000353-9557.868
ENSAMXG00000029518-5437.079ENSAMXG00000017199-5132.836
ENSAMXG00000029518-6846.442ENSAMXG00000036233-7549.561
ENSAMXG00000029518-6350.296ENSAMXG00000032212-8850.296
ENSAMXG00000029518-5261.194ENSAMXG00000011804-8761.194
ENSAMXG00000029518-6435.769ENSAMXG00000029660-5536.000
ENSAMXG00000029518-6550.249ENSAMXG00000039700-8850.249
ENSAMXG00000029518-5943.269ENSAMXG00000012604-9542.929
ENSAMXG00000029518-5657.895ENSAMXG00000034847-8657.895
ENSAMXG00000029518-5252.252ENSAMXG00000039752-9352.252
ENSAMXG00000029518-5266.667ENSAMXG00000033124-5566.667
ENSAMXG00000029518-5256.853ENSAMXG00000041128-9056.853
ENSAMXG00000029518-5152.261ENSAMXG00000009776-9652.792
ENSAMXG00000029518-5656.897ENSAMXG00000035127-9238.860
ENSAMXG00000029518-5270.213ENSAMXG00000041609-9170.213
ENSAMXG00000029518-5264.935ENSAMXG00000029109-8564.935
ENSAMXG00000029518-6552.727ENSAMXG00000034344-7752.727
ENSAMXG00000029518-7864.444ENSAMXG00000035437-9864.444
ENSAMXG00000029518-8960.177ENSAMXG00000036567-9081.609
ENSAMXG00000029518-6563.014ENSAMXG00000037760-9563.014
ENSAMXG00000029518-5763.636ENSAMXG00000010078-8763.636
ENSAMXG00000029518-7466.667ENSAMXG00000043291-9662.222
ENSAMXG00000029518-6257.317ENSAMXG00000017959-9757.317
ENSAMXG00000029518-5847.312ENSAMXG00000035246-7747.312
ENSAMXG00000029518-6660.199ENSAMXG00000031501-9360.199
ENSAMXG00000029518-5272.826ENSAMXG00000042167-9172.826
ENSAMXG00000029518-5958.794ENSAMXG00000039879-9859.898
ENSAMXG00000029518-5136.735ENSAMXG00000040198-5044.444
ENSAMXG00000029518-5544.304ENSAMXG00000007441-8444.304
ENSAMXG00000029518-5980.000ENSAMXG00000041725-9680.000
ENSAMXG00000029518-5463.830ENSAMXG00000037709-8663.830
ENSAMXG00000029518-5853.448ENSAMXG00000037703-8757.143
ENSAMXG00000029518-5758.763ENSAMXG00000019489-8758.763
ENSAMXG00000029518-5360.804ENSAMXG00000018161-9461.616
ENSAMXG00000029518-7951.256ENSAMXG00000043423-5951.269
ENSAMXG00000029518-6050.543ENSAMXG00000042774-9050.543
ENSAMXG00000029518-5260.591ENSAMXG00000039162-9561.386
ENSAMXG00000029518-5567.391ENSAMXG00000001626-9367.391
ENSAMXG00000029518-5363.452ENSAMXG00000041404-9762.121
ENSAMXG00000029518-5567.500ENSAMXG00000041721-6767.500
ENSAMXG00000029518-5262.814ENSAMXG00000037885-9762.121
ENSAMXG00000029518-5649.020ENSAMXG00000037143-9448.000
ENSAMXG00000029518-5168.182ENSAMXG00000037923-9968.182
ENSAMXG00000029518-5255.208ENSAMXG00000029783-8855.208
ENSAMXG00000029518-6358.879ENSAMXG00000039770-8558.879
ENSAMXG00000029518-6032.222ENSAMXG00000042191zbtb47a6932.222
ENSAMXG00000029518-6056.436ENSAMXG00000044110-8956.436
ENSAMXG00000029518-5151.163ENSAMXG00000037382-6546.667
ENSAMXG00000029518-5561.809ENSAMXG00000039744-9961.929
ENSAMXG00000029518-5281.522ENSAMXG00000033500-8881.522
ENSAMXG00000029518-5556.853ENSAMXG00000029178-9656.853
ENSAMXG00000029518-7134.211ENSAMXG00000044096-9032.967
ENSAMXG00000029518-5860.550ENSAMXG00000039408-9163.768
ENSAMXG00000029518-5455.435ENSAMXG00000043302-7355.435
ENSAMXG00000029518-5547.895ENSAMXG00000043019-9547.895
ENSAMXG00000029518-6344.000ENSAMXG00000010805-9245.685
ENSAMXG00000029518-5960.101ENSAMXG00000035949-8260.101
ENSAMXG00000029518-5362.814ENSAMXG00000008613-9862.814
ENSAMXG00000029518-5647.761ENSAMXG00000034333-9547.619
ENSAMXG00000029518-6851.429ENSAMXG00000013492-9653.261
ENSAMXG00000029518-6034.615ENSAMXG00000033299-6834.615
ENSAMXG00000029518-6345.918ENSAMXG00000029960-9450.000
ENSAMXG00000029518-9151.064ENSAMXG00000042174-9251.064
ENSAMXG00000029518-5863.636ENSAMXG00000036257-8863.636
ENSAMXG00000029518-5844.615ENSAMXG00000044028-9968.235
ENSAMXG00000029518-5557.500ENSAMXG00000031489-8572.826
ENSAMXG00000029518-6357.500ENSAMXG00000037326-9057.500
ENSAMXG00000029518-5770.968ENSAMXG00000043978-8758.242
ENSAMXG00000029518-5740.541ENSAMXG00000006669GFI16840.541
ENSAMXG00000029518-5261.692ENSAMXG00000029878-9461.692
ENSAMXG00000029518-5932.843ENSAMXG00000025761-8332.843
ENSAMXG00000029518-5265.574ENSAMXG00000037717-9765.574
ENSAMXG00000029518-5262.069ENSAMXG00000024978-8961.616
ENSAMXG00000029518-5360.417ENSAMXG00000036241-8660.417
ENSAMXG00000029518-5841.014ENSAMXG00000029161-8462.637
ENSAMXG00000029518-6048.780ENSAMXG00000037981-7047.959
ENSAMXG00000029518-5267.391ENSAMXG00000042275-9867.391
ENSAMXG00000029518-5262.245ENSAMXG00000031794-9862.963
ENSAMXG00000029518-5971.739ENSAMXG00000039432-9863.889
ENSAMXG00000029518-7164.364ENSAMXG00000038156-9762.454
ENSAMXG00000029518-5162.371ENSAMXG00000025455-9862.176
ENSAMXG00000029518-8871.667ENSAMXG00000039881-9974.408
ENSAMXG00000029518-6760.000ENSAMXG00000010930-7560.000
ENSAMXG00000029518-6162.312ENSAMXG00000025965-9661.616
ENSAMXG00000029518-6650.407ENSAMXG00000026144-8750.407
ENSAMXG00000029518-5265.979ENSAMXG00000031900-9149.505
ENSAMXG00000029518-7082.143ENSAMXG00000031009-9482.143
ENSAMXG00000029518-5152.222ENSAMXG00000041861-8076.842
ENSAMXG00000029518-7077.778ENSAMXG00000017609-8577.778
ENSAMXG00000029518-5243.386ENSAMXG00000031307-5842.857
ENSAMXG00000029518-6650.847ENSAMXG00000034096-9450.847
ENSAMXG00000029518-5949.510ENSAMXG00000026142-9349.254
ENSAMXG00000029518-5451.111ENSAMXG00000026143-9351.111
ENSAMXG00000029518-5254.271ENSAMXG00000039016-8954.082
ENSAMXG00000029518-5257.635ENSAMXG00000031646-9656.281
ENSAMXG00000029518-5266.667ENSAMXG00000031844-9073.034
ENSAMXG00000029518-5341.237ENSAMXG00000043178-7241.237
ENSAMXG00000029518-5570.213ENSAMXG00000032619-9670.213
ENSAMXG00000029518-5263.235ENSAMXG00000033013-8164.835
ENSAMXG00000029518-5859.500ENSAMXG00000036762-9785.057
ENSAMXG00000029518-5876.404ENSAMXG00000004610-10068.041
ENSAMXG00000029518-6860.976ENSAMXG00000030530-9760.976
ENSAMXG00000029518-5353.299ENSAMXG00000039977-9073.913
ENSAMXG00000029518-5447.312ENSAMXG00000034934-10047.312
ENSAMXG00000029518-6448.052ENSAMXG00000012873-9352.941
ENSAMXG00000029518-5253.659ENSAMXG00000036633-6248.936
ENSAMXG00000029518-7080.435ENSAMXG00000032457-9780.435
ENSAMXG00000029518-8881.416ENSAMXG00000039182-9181.416
ENSAMXG00000029518-6551.020ENSAMXG00000033252-9153.488
ENSAMXG00000029518-5253.846ENSAMXG00000031496-9553.846
ENSAMXG00000029518-5361.000ENSAMXG00000041975-8258.763
ENSAMXG00000029518-5947.458ENSAMXG00000034857-6750.000
ENSAMXG00000029518-5660.976ENSAMXG00000038325-9360.976
ENSAMXG00000029518-5176.404ENSAMXG00000038324-7276.404
ENSAMXG00000029518-5169.565ENSAMXG00000032841-7869.565
ENSAMXG00000029518-5451.546ENSAMXG00000042784-9451.546
ENSAMXG00000029518-5568.085ENSAMXG00000040630-9368.085
ENSAMXG00000029518-5257.265ENSAMXG00000041650-9557.265
ENSAMXG00000029518-5264.286ENSAMXG00000035683-9264.286
ENSAMXG00000029518-5274.336ENSAMXG00000035920-9274.336
ENSAMXG00000029518-7555.331ENSAMXG00000035145-9754.305
ENSAMXG00000029518-5250.000ENSAMXG00000041862-8950.000
ENSAMXG00000029518-6231.746ENSAMXG00000041864prdm58130.693
ENSAMXG00000029518-5676.087ENSAMXG00000041865-9476.087
ENSAMXG00000029518-5175.000ENSAMXG00000034958-9075.000
ENSAMXG00000029518-5563.043ENSAMXG00000042633-9653.333
ENSAMXG00000029518-5267.033ENSAMXG00000009563-9467.033
ENSAMXG00000029518-5263.830ENSAMXG00000042593-9067.391
ENSAMXG00000029518-6658.000ENSAMXG00000039004-9055.276
ENSAMXG00000029518-5576.087ENSAMXG00000038453-8358.586
ENSAMXG00000029518-7031.841ENSAMXG00000024907znf319b8232.353
ENSAMXG00000029518-5435.088ENSAMXG00000033001-5335.088
ENSAMXG00000029518-5359.000ENSAMXG00000035809-9956.566
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000029518-5137.438ENSAPOG00000019138-5737.438Acanthochromis_polyacanthus
ENSAMXG00000029518-5230.233ENSAPOG00000012437-9230.233Acanthochromis_polyacanthus
ENSAMXG00000029518-6948.000ENSAPOG00000008319-6548.000Acanthochromis_polyacanthus
ENSAMXG00000029518-6045.455ENSACIG00000004641-6545.455Amphilophus_citrinellus
ENSAMXG00000029518-7241.732ENSACIG00000017892-8341.732Amphilophus_citrinellus
ENSAMXG00000029518-5135.644ENSAOCG00000016897-6636.434Amphiprion_ocellaris
ENSAMXG00000029518-5136.508ENSAOCG00000006744-8336.508Amphiprion_ocellaris
ENSAMXG00000029518-6948.000ENSAOCG00000014769-8148.000Amphiprion_ocellaris
ENSAMXG00000029518-5242.857ENSAOCG00000001325-6342.857Amphiprion_ocellaris
ENSAMXG00000029518-6948.000ENSAOCG00000015944-7348.000Amphiprion_ocellaris
ENSAMXG00000029518-5143.478ENSAPEG00000015714-6843.478Amphiprion_percula
ENSAMXG00000029518-5236.139ENSAPEG00000001556-6636.434Amphiprion_percula
ENSAMXG00000029518-7536.842ENSAPEG00000010013-6236.842Amphiprion_percula
ENSAMXG00000029518-5544.565ENSATEG00000018931-9244.565Anabas_testudineus
ENSAMXG00000029518-5141.772ENSCING00000002128zf(c2h2)-356441.772Ciona_intestinalis
ENSAMXG00000029518-5160.465ENSCSEG00000015593-7360.465Cynoglossus_semilaevis
ENSAMXG00000029518-5954.839ENSCSEG00000010453-5454.839Cynoglossus_semilaevis
ENSAMXG00000029518-5548.837ENSCSEG00000010264-9048.837Cynoglossus_semilaevis
ENSAMXG00000029518-5249.153ENSCVAG00000012682-6149.153Cyprinodon_variegatus
ENSAMXG00000029518-6149.425ENSCVAG00000006484-5749.425Cyprinodon_variegatus
ENSAMXG00000029518-5540.426ENSCVAG00000015616-7340.426Cyprinodon_variegatus
ENSAMXG00000029518-5647.826ENSCVAG00000003250-6547.826Cyprinodon_variegatus
ENSAMXG00000029518-5048.276ENSCVAG00000006653-5848.276Cyprinodon_variegatus
ENSAMXG00000029518-6334.177ENSEBUG00000011449-7834.177Eptatretus_burgeri
ENSAMXG00000029518-5254.054ENSELUG00000024007-7850.000Esox_lucius
ENSAMXG00000029518-5131.188ENSELUG00000001909-6844.565Esox_lucius
ENSAMXG00000029518-5632.663ENSGAFG00000008204-7132.663Gambusia_affinis
ENSAMXG00000029518-5250.575ENSGAFG00000001879-5950.575Gambusia_affinis
ENSAMXG00000029518-6032.780ENSHCOG00000001873-5735.829Hippocampus_comes
ENSAMXG00000029518-5935.294ENSHCOG00000008227-6435.294Hippocampus_comes
ENSAMXG00000029518-6032.780ENSHCOG00000008550-5735.829Hippocampus_comes
ENSAMXG00000029518-5346.000ENSHCOG00000015497-7546.000Hippocampus_comes
ENSAMXG00000029518-5251.087ENSHCOG00000013489-9051.087Hippocampus_comes
ENSAMXG00000029518-5630.189ENSLBEG00000017424-9730.189Labrus_bergylta
ENSAMXG00000029518-6250.562ENSLBEG00000001132-7850.562Labrus_bergylta
ENSAMXG00000029518-5156.098ENSLBEG00000006161-7354.545Labrus_bergylta
ENSAMXG00000029518-6137.705ENSLBEG00000007106-5937.989Labrus_bergylta
ENSAMXG00000029518-5640.659ENSLBEG00000011210-5340.659Labrus_bergylta
ENSAMXG00000029518-6241.538ENSLOCG00000004208-9641.538Lepisosteus_oculatus
ENSAMXG00000029518-6345.833ENSMAMG00000017939-8046.739Mastacembelus_armatus
ENSAMXG00000029518-6833.129ENSMZEG00005013907-7033.129Maylandia_zebra
ENSAMXG00000029518-7330.634ENSMALG00000004279-9130.634Monopterus_albus
ENSAMXG00000029518-6335.268ENSONIG00000007967-7135.021Oreochromis_niloticus
ENSAMXG00000029518-5643.011ENSONIG00000005050-7731.977Oreochromis_niloticus
ENSAMXG00000029518-5048.837ENSORLG00000028711-7448.837Oryzias_latipes
ENSAMXG00000029518-6243.333ENSORLG00000021885-6243.333Oryzias_latipes
ENSAMXG00000029518-8235.514ENSORLG00000002268-9235.514Oryzias_latipes
ENSAMXG00000029518-6248.352ENSORLG00020018921-7241.818Oryzias_latipes_hni
ENSAMXG00000029518-5252.778ENSORLG00015018099-6133.889Oryzias_latipes_hsok
ENSAMXG00000029518-5346.875ENSOMEG00000005578-6546.875Oryzias_melastigma
ENSAMXG00000029518-5738.462ENSPMGG00000007051-5340.741Periophthalmus_magnuspinnatus
ENSAMXG00000029518-5231.579ENSPMGG00000019750-7831.579Periophthalmus_magnuspinnatus
ENSAMXG00000029518-5553.933ENSPMGG00000009571-7353.933Periophthalmus_magnuspinnatus
ENSAMXG00000029518-5354.945ENSPMGG00000002661-6754.945Periophthalmus_magnuspinnatus
ENSAMXG00000029518-5457.143ENSPMGG00000002455-7857.143Periophthalmus_magnuspinnatus
ENSAMXG00000029518-5165.116ENSPMGG00000006928-5042.353Periophthalmus_magnuspinnatus
ENSAMXG00000029518-5345.361ENSPMGG00000002659-8345.361Periophthalmus_magnuspinnatus
ENSAMXG00000029518-7032.500ENSPMAG00000004189-9832.500Petromyzon_marinus
ENSAMXG00000029518-7044.000ENSPFOG00000018860-10044.000Poecilia_formosa
ENSAMXG00000029518-5248.235ENSPFOG00000009491-5048.235Poecilia_formosa
ENSAMXG00000029518-6148.913ENSPLAG00000008941-7948.913Poecilia_latipinna
ENSAMXG00000029518-5345.977ENSPLAG00000014832-7545.977Poecilia_latipinna
ENSAMXG00000029518-5231.414ENSPLAG00000010067-6331.414Poecilia_latipinna
ENSAMXG00000029518-5131.863ENSPMEG00000002953-5631.863Poecilia_mexicana
ENSAMXG00000029518-5247.126ENSPMEG00000024117-5047.126Poecilia_mexicana
ENSAMXG00000029518-5945.977ENSPMEG00000005210-7545.977Poecilia_mexicana
ENSAMXG00000029518-6244.444ENSPNYG00000017888-5544.444Pundamilia_nyererei
ENSAMXG00000029518-5241.748ENSPNAG00000005946-7141.748Pygocentrus_nattereri
ENSAMXG00000029518-5339.167ENSSFOG00015011531-8040.845Scleropages_formosus
ENSAMXG00000029518-5841.000ENSSMAG00000013291-9839.024Scophthalmus_maximus
ENSAMXG00000029518-6853.333ENSSMAG00000008308-6353.333Scophthalmus_maximus
ENSAMXG00000029518-5134.906ENSSLDG00000014436-7034.906Seriola_lalandi_dorsalis
ENSAMXG00000029518-6334.842ENSSLDG00000011849-5934.842Seriola_lalandi_dorsalis
ENSAMXG00000029518-6748.780ENSSPAG00000011533-8848.780Stegastes_partitus
ENSAMXG00000029518-5533.333ENSSPAG00000011544-5435.220Stegastes_partitus
ENSAMXG00000029518-7546.465ENSXETG00000012506znf919946.465Xenopus_tropicalis
ENSAMXG00000029518-6745.455ENSXCOG00000020768-7245.455Xiphophorus_couchianus
ENSAMXG00000029518-5449.057ENSXCOG00000003441-5634.946Xiphophorus_couchianus

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