EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000029533 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: serine/threonine-protein kinase ppk4-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 25488 bases
Position: chrAPWO02000275.1:77711-103198
Accession: 103047258
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000033673	Ribonuc_2-5A	PF06479.12	1.9e-10	1	1
ENSAMXP00000045985	Ribonuc_2-5A	PF06479.12	1.9e-10	1	1
ENSAMXP00000040153	Ribonuc_2-5A	PF06479.12	2.8e-08	1	1
ENSAMXP00000047953	Ribonuc_2-5A	PF06479.12	2.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000057956	-	5970	-	ENSAMXP00000040153	904 (aa)	-	-
ENSAMXT00000051648	-	4362	XM_022685528	ENSAMXP00000033673	904 (aa)	XP_022541249	-
ENSAMXT00000043482	-	5970	-	ENSAMXP00000045985	904 (aa)	-	-
ENSAMXT00000048500	-	5970	-	ENSAMXP00000047953	904 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000029533's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000029533's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000029533	-	97	44.831	ENSAPOG00000018674	-	96	44.831	Acanthochromis_polyacanthus
ENSAMXG00000029533	-	97	47.339	ENSAOCG00000006611	-	94	46.858	Amphiprion_ocellaris
ENSAMXG00000029533	-	97	44.820	ENSAOCG00000006622	-	94	44.693	Amphiprion_ocellaris
ENSAMXG00000029533	-	97	44.707	ENSAPEG00000022456	-	94	44.707	Amphiprion_percula
ENSAMXG00000029533	-	99	47.692	ENSATEG00000016497	-	99	47.692	Anabas_testudineus
ENSAMXG00000029533	-	99	47.894	ENSACLG00000000717	-	95	47.783	Astatotilapia_calliptera
ENSAMXG00000029533	-	97	43.632	ENSCVAG00000016590	-	95	43.522	Cyprinodon_variegatus
ENSAMXG00000029533	-	98	51.438	ENSELUG00000021509	-	98	51.659	Esox_lucius
ENSAMXG00000029533	-	98	46.409	ENSMAMG00000005604	-	95	46.409	Mastacembelus_armatus
ENSAMXG00000029533	-	99	46.304	ENSMZEG00005001859	-	95	46.104	Maylandia_zebra
ENSAMXG00000029533	-	98	44.766	ENSORLG00000025218	-	94	44.766	Oryzias_latipes
ENSAMXG00000029533	-	98	44.209	ENSORLG00020014495	-	94	44.209	Oryzias_latipes_hni
ENSAMXG00000029533	-	99	42.684	ENSOMEG00000006152	-	95	42.684	Oryzias_melastigma
ENSAMXG00000029533	-	56	54.331	ENSPFOG00000000794	-	94	54.331	Poecilia_formosa
ENSAMXG00000029533	-	97	45.186	ENSPMEG00000016617	-	95	45.186	Poecilia_mexicana
ENSAMXG00000029533	-	99	69.113	ENSPNAG00000004804	-	99	69.113	Pygocentrus_nattereri
ENSAMXG00000029533	-	97	48.242	ENSSFOG00015018634	-	97	48.352	Scleropages_formosus
ENSAMXG00000029533	-	100	42.966	ENSSMAG00000011502	-	95	42.919	Scophthalmus_maximus
ENSAMXG00000029533	-	100	42.002	ENSSMAG00000011493	-	95	42.764	Scophthalmus_maximus
ENSAMXG00000029533	-	99	47.859	ENSSDUG00000007315	-	99	55.107	Seriola_dumerili
ENSAMXG00000029533	-	99	48.352	ENSSLDG00000004852	-	95	48.136	Seriola_lalandi_dorsalis
ENSAMXG00000029533	-	99	48.197	ENSSLDG00000006883	-	96	48.197	Seriola_lalandi_dorsalis