EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000029660 (Gene tree)
Gene ID: 103029156
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 771-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 7798 bases
Position: chrAPWO02000976.1:312093-319890
Accession: 103029156
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000041552	zf-C2H2	PF00096.26	4.5e-36	1	6
ENSAMXP00000041552	zf-C2H2	PF00096.26	4.5e-36	2	6
ENSAMXP00000041552	zf-C2H2	PF00096.26	4.5e-36	3	6
ENSAMXP00000041552	zf-C2H2	PF00096.26	4.5e-36	4	6
ENSAMXP00000041552	zf-C2H2	PF00096.26	4.5e-36	5	6
ENSAMXP00000041552	zf-C2H2	PF00096.26	4.5e-36	6	6
ENSAMXP00000041552	zf-met	PF12874.7	1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000052510	-	5747	XM_022687084	ENSAMXP00000041552	464 (aa)	XP_022542805	UPI000BBD9C72

Gene Model

Click here to download ENSAMXG00000029660's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000029660's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000029660	-	50	48.958	ENSAMXG00000033252	-	97	48.958
ENSAMXG00000029660	-	63	52.727	ENSAMXG00000035286	si:ch1073-224n8.1	92	52.727
ENSAMXG00000029660	-	60	53.030	ENSAMXG00000032212	-	87	53.030
ENSAMXG00000029660	-	54	49.327	ENSAMXG00000032237	-	92	49.327
ENSAMXG00000029660	-	52	54.144	ENSAMXG00000035875	-	99	54.144
ENSAMXG00000029660	-	51	35.507	ENSAMXG00000044034	-	61	38.674
ENSAMXG00000029660	-	57	48.198	ENSAMXG00000042633	-	96	48.198
ENSAMXG00000029660	-	74	37.755	ENSAMXG00000038122	-	96	51.250
ENSAMXG00000029660	-	50	37.824	ENSAMXG00000025761	-	86	37.824
ENSAMXG00000029660	-	51	52.915	ENSAMXG00000041725	-	85	52.915
ENSAMXG00000029660	-	51	53.488	ENSAMXG00000038324	-	81	53.488
ENSAMXG00000029660	-	58	50.698	ENSAMXG00000038284	-	92	50.698
ENSAMXG00000029660	-	51	50.980	ENSAMXG00000034857	-	64	50.980
ENSAMXG00000029660	-	52	51.724	ENSAMXG00000012604	-	96	51.724
ENSAMXG00000029660	-	52	51.220	ENSAMXG00000013492	-	97	43.981
ENSAMXG00000029660	-	54	52.466	ENSAMXG00000031794	-	94	52.466
ENSAMXG00000029660	-	50	54.884	ENSAMXG00000034402	-	85	54.884
ENSAMXG00000029660	-	53	56.693	ENSAMXG00000041404	-	98	56.132
ENSAMXG00000029660	-	51	51.869	ENSAMXG00000029960	-	94	51.869
ENSAMXG00000029660	-	52	49.776	ENSAMXG00000037923	-	99	52.083
ENSAMXG00000029660	-	52	50.000	ENSAMXG00000038905	-	92	50.000
ENSAMXG00000029660	-	52	49.550	ENSAMXG00000037326	-	96	49.550
ENSAMXG00000029660	-	57	45.520	ENSAMXG00000039182	-	69	45.520
ENSAMXG00000029660	-	52	52.273	ENSAMXG00000029783	-	86	52.273
ENSAMXG00000029660	-	52	37.671	ENSAMXG00000033001	-	73	37.671
ENSAMXG00000029660	-	55	41.704	ENSAMXG00000033299	-	71	41.704
ENSAMXG00000029660	-	53	36.905	ENSAMXG00000035246	-	74	36.905
ENSAMXG00000029660	-	53	53.153	ENSAMXG00000040630	-	99	53.153
ENSAMXG00000029660	-	51	53.289	ENSAMXG00000044028	-	99	53.289
ENSAMXG00000029660	-	55	36.000	ENSAMXG00000029518	-	64	35.769
ENSAMXG00000029660	-	52	54.709	ENSAMXG00000029178	-	98	54.709
ENSAMXG00000029660	-	57	52.703	ENSAMXG00000026144	-	88	54.255
ENSAMXG00000029660	-	54	49.770	ENSAMXG00000026143	-	94	49.770
ENSAMXG00000029660	-	66	39.655	ENSAMXG00000035525	znf646	80	31.220
ENSAMXG00000029660	-	59	53.023	ENSAMXG00000036233	-	90	53.023
ENSAMXG00000029660	-	52	46.721	ENSAMXG00000042784	-	93	51.724
ENSAMXG00000029660	-	60	50.267	ENSAMXG00000040806	-	90	50.267
ENSAMXG00000029660	-	51	54.709	ENSAMXG00000009776	-	88	54.709
ENSAMXG00000029660	-	53	52.332	ENSAMXG00000039432	-	93	52.332
ENSAMXG00000029660	-	52	52.558	ENSAMXG00000035690	-	75	52.558
ENSAMXG00000029660	-	65	51.570	ENSAMXG00000040212	-	85	54.268
ENSAMXG00000029660	-	52	49.733	ENSAMXG00000039700	-	96	49.733
ENSAMXG00000029660	-	56	55.502	ENSAMXG00000007092	-	99	55.502
ENSAMXG00000029660	-	54	51.515	ENSAMXG00000042167	-	86	51.515
ENSAMXG00000029660	-	52	34.310	ENSAMXG00000029059	-	67	34.310
ENSAMXG00000029660	-	53	46.875	ENSAMXG00000039881	-	52	46.875
ENSAMXG00000029660	-	50	49.327	ENSAMXG00000012873	-	90	51.852
ENSAMXG00000029660	-	64	45.178	ENSAMXG00000007973	-	95	45.178
ENSAMXG00000029660	-	55	48.879	ENSAMXG00000039770	-	86	48.879
ENSAMXG00000029660	-	64	36.634	ENSAMXG00000042624	SCRT1	71	36.634
ENSAMXG00000029660	-	56	53.275	ENSAMXG00000032619	-	98	53.275
ENSAMXG00000029660	-	55	51.570	ENSAMXG00000042174	-	92	51.570
ENSAMXG00000029660	-	54	49.763	ENSAMXG00000043019	-	91	49.763
ENSAMXG00000029660	-	51	56.190	ENSAMXG00000033124	-	62	56.190
ENSAMXG00000029660	-	52	54.839	ENSAMXG00000030911	-	69	54.839
ENSAMXG00000029660	-	57	40.152	ENSAMXG00000034158	scrt2	65	40.152
ENSAMXG00000029660	-	67	36.686	ENSAMXG00000035090	-	50	37.342
ENSAMXG00000029660	-	64	54.726	ENSAMXG00000041975	-	97	54.726
ENSAMXG00000029660	-	58	56.158	ENSAMXG00000009558	-	98	56.158
ENSAMXG00000029660	-	70	46.637	ENSAMXG00000012589	-	73	46.637
ENSAMXG00000029660	-	52	53.052	ENSAMXG00000039004	-	90	53.052
ENSAMXG00000029660	-	58	52.577	ENSAMXG00000034333	-	92	52.577
ENSAMXG00000029660	-	53	49.733	ENSAMXG00000041861	-	94	49.733
ENSAMXG00000029660	-	50	44.651	ENSAMXG00000041864	prdm5	73	44.651
ENSAMXG00000029660	-	52	52.703	ENSAMXG00000042275	-	95	52.703
ENSAMXG00000029660	-	56	52.105	ENSAMXG00000034096	-	87	52.105
ENSAMXG00000029660	-	53	56.831	ENSAMXG00000031009	-	88	56.831
ENSAMXG00000029660	-	55	51.795	ENSAMXG00000032841	-	77	51.795
ENSAMXG00000029660	-	71	46.637	ENSAMXG00000035127	-	89	47.826
ENSAMXG00000029660	-	52	38.614	ENSAMXG00000038085	scrt1a	57	38.614
ENSAMXG00000029660	-	55	52.667	ENSAMXG00000029161	-	83	52.667
ENSAMXG00000029660	-	66	31.120	ENSAMXG00000034873	-	80	37.063
ENSAMXG00000029660	-	73	40.000	ENSAMXG00000037544	GFI1B	60	40.000
ENSAMXG00000029660	-	59	49.798	ENSAMXG00000035949	-	84	49.798
ENSAMXG00000029660	-	72	36.111	ENSAMXG00000039622	zbtb41	58	36.111
ENSAMXG00000029660	-	52	51.630	ENSAMXG00000044107	-	91	51.630
ENSAMXG00000029660	-	52	42.384	ENSAMXG00000034934	-	89	39.375
ENSAMXG00000029660	-	55	50.000	ENSAMXG00000036915	-	97	50.000
ENSAMXG00000029660	-	54	54.229	ENSAMXG00000031489	-	91	54.229
ENSAMXG00000029660	-	55	48.879	ENSAMXG00000037143	-	99	49.302
ENSAMXG00000029660	-	54	53.535	ENSAMXG00000037760	-	97	53.535
ENSAMXG00000029660	-	50	40.426	ENSAMXG00000007441	-	61	37.853
ENSAMXG00000029660	-	62	47.312	ENSAMXG00000043178	-	75	47.312
ENSAMXG00000029660	-	63	52.915	ENSAMXG00000010930	-	86	52.915
ENSAMXG00000029660	-	54	54.822	ENSAMXG00000033500	-	93	54.822
ENSAMXG00000029660	-	67	52.093	ENSAMXG00000035437	-	98	52.093
ENSAMXG00000029660	-	56	52.915	ENSAMXG00000039016	-	80	52.915
ENSAMXG00000029660	-	53	52.018	ENSAMXG00000034847	-	90	52.018
ENSAMXG00000029660	-	58	54.419	ENSAMXG00000017609	-	83	54.419
ENSAMXG00000029660	-	56	47.030	ENSAMXG00000014745	-	80	47.337

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000029660	-	59	44.920	ENSACIG00000007882	-	75	44.920	Amphilophus_citrinellus
ENSAMXG00000029660	-	53	50.000	ENSACLG00000024670	-	70	50.000	Astatotilapia_calliptera
ENSAMXG00000029660	-	50	41.584	ENSACLG00000000521	-	93	41.584	Astatotilapia_calliptera
ENSAMXG00000029660	-	53	47.907	ENSDARG00000099172	BX000701.1	91	47.907	Danio_rerio
ENSAMXG00000029660	-	56	50.990	ENSDARG00000102401	znf1001	93	50.990	Danio_rerio
ENSAMXG00000029660	-	50	50.581	ENSDARG00000078814	si:dkey-34m19.3	77	50.581	Danio_rerio
ENSAMXG00000029660	-	54	52.475	ENSDARG00000099890	CU207221.2	99	52.475	Danio_rerio
ENSAMXG00000029660	-	66	39.617	ENSDARG00000053165	zgc:113377	97	48.276	Danio_rerio
ENSAMXG00000029660	-	56	53.456	ENSDARG00000099731	CABZ01066719.1	99	53.456	Danio_rerio
ENSAMXG00000029660	-	55	52.475	ENSDARG00000098248	CABZ01081730.1	90	52.475	Danio_rerio
ENSAMXG00000029660	-	57	52.475	ENSDARG00000100803	zgc:173517	90	52.475	Danio_rerio
ENSAMXG00000029660	-	59	49.774	ENSDARG00000097521	si:dkey-111k8.5	87	49.774	Danio_rerio
ENSAMXG00000029660	-	56	50.990	ENSDARG00000115857	znf1001	93	50.990	Danio_rerio
ENSAMXG00000029660	-	59	54.726	ENSDARG00000103777	znf1001	100	54.726	Danio_rerio
ENSAMXG00000029660	-	52	47.321	ENSDARG00000104904	si:ch73-221f6.1	74	47.321	Danio_rerio
ENSAMXG00000029660	-	59	53.398	ENSDARG00000105056	znf45l	93	53.398	Danio_rerio
ENSAMXG00000029660	-	55	43.500	ENSEBUG00000015073	-	83	43.500	Eptatretus_burgeri
ENSAMXG00000029660	-	54	48.416	ENSFHEG00000018009	-	53	48.416	Fundulus_heteroclitus
ENSAMXG00000029660	-	68	34.897	ENSFHEG00000018209	-	75	39.044	Fundulus_heteroclitus
ENSAMXG00000029660	-	51	50.000	ENSHBUG00000018916	-	64	50.000	Haplochromis_burtoni
ENSAMXG00000029660	-	56	47.414	ENSKMAG00000009563	-	96	47.414	Kryptolebias_marmoratus
ENSAMXG00000029660	-	55	45.299	ENSLBEG00000028628	znf1174	56	45.299	Labrus_bergylta
ENSAMXG00000029660	-	59	45.291	ENSMZEG00005027943	-	92	48.000	Maylandia_zebra
ENSAMXG00000029660	-	52	41.393	ENSMZEG00005021426	-	83	41.393	Maylandia_zebra
ENSAMXG00000029660	-	51	48.085	ENSMZEG00005025729	-	91	48.085	Maylandia_zebra
ENSAMXG00000029660	-	51	38.346	ENSMZEG00005022161	-	90	38.346	Maylandia_zebra
ENSAMXG00000029660	-	51	50.000	ENSMZEG00005007426	-	67	50.000	Maylandia_zebra
ENSAMXG00000029660	-	62	34.921	ENSMZEG00005005162	-	82	34.921	Maylandia_zebra
ENSAMXG00000029660	-	52	39.823	ENSMZEG00005025568	-	79	39.823	Maylandia_zebra
ENSAMXG00000029660	-	50	46.316	ENSMALG00000018074	-	57	40.851	Monopterus_albus
ENSAMXG00000029660	-	50	36.538	ENSMALG00000008638	-	59	36.715	Monopterus_albus
ENSAMXG00000029660	-	57	33.462	ENSONIG00000006585	-	98	34.615	Oreochromis_niloticus
ENSAMXG00000029660	-	54	41.739	ENSONIG00000013908	-	100	41.739	Oreochromis_niloticus
ENSAMXG00000029660	-	58	42.105	ENSPKIG00000018633	-	57	42.105	Paramormyrops_kingsleyae
ENSAMXG00000029660	-	76	42.188	ENSPLAG00000016561	zgc:113348	92	48.936	Poecilia_latipinna
ENSAMXG00000029660	-	58	44.311	ENSPMEG00000007573	zgc:113343	69	43.805	Poecilia_mexicana
ENSAMXG00000029660	-	54	43.976	ENSPREG00000005538	-	78	43.976	Poecilia_reticulata
ENSAMXG00000029660	-	58	40.984	ENSPREG00000014105	-	87	40.984	Poecilia_reticulata
ENSAMXG00000029660	-	63	41.156	ENSSPAG00000013109	si:ch211-241b2.1	89	41.429	Stegastes_partitus
ENSAMXG00000029660	-	50	39.326	ENSSPAG00000009426	-	63	39.326	Stegastes_partitus
ENSAMXG00000029660	-	50	41.206	ENSSPAG00000006539	-	91	41.753	Stegastes_partitus
ENSAMXG00000029660	-	54	46.369	ENSTNIG00000000277	-	93	46.369	Tetraodon_nigroviridis