EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000029689 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 9564 bases
Position: chrAPWO02000714.1:44444-54007
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000042128	RVT_1	PF00078.27	6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000043604	-	2232	-	ENSAMXP00000042128	743 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000029689's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000029689's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000029689	-	83	68.189	ENSAMXG00000033831	-	81	68.189
ENSAMXG00000029689	-	83	90.177	ENSAMXG00000036897	-	85	90.177
ENSAMXG00000029689	-	78	48.440	ENSAMXG00000030934	-	89	48.990
ENSAMXG00000029689	-	79	48.908	ENSAMXG00000041694	-	62	48.908
ENSAMXG00000029689	-	82	68.893	ENSAMXG00000043875	-	89	69.522
ENSAMXG00000029689	-	77	50.697	ENSAMXG00000040915	-	70	49.831
ENSAMXG00000029689	-	77	48.253	ENSAMXG00000038544	-	86	48.805
ENSAMXG00000029689	-	81	70.432	ENSAMXG00000042699	-	56	69.502

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000029689	-	60	45.238	ENSACAG00000029367	-	83	33.871	Anolis_carolinensis
ENSAMXG00000029689	-	76	46.561	ENSIPUG00000000467	-	77	47.007	Ictalurus_punctatus
ENSAMXG00000029689	-	76	49.647	ENSIPUG00000009957	-	87	49.738	Ictalurus_punctatus
ENSAMXG00000029689	-	77	47.993	ENSIPUG00000020583	-	82	48.342	Ictalurus_punctatus
ENSAMXG00000029689	-	77	50.175	ENSIPUG00000023478	-	87	50.441	Ictalurus_punctatus
ENSAMXG00000029689	-	76	41.594	ENSKMAG00000021728	-	87	41.594	Kryptolebias_marmoratus
ENSAMXG00000029689	-	67	32.024	ENSORLG00000004601	-	66	31.509	Oryzias_latipes
ENSAMXG00000029689	-	82	38.474	ENSORLG00000025074	-	91	37.559	Oryzias_latipes
ENSAMXG00000029689	-	83	39.423	ENSORLG00000027546	-	86	39.474	Oryzias_latipes
ENSAMXG00000029689	-	83	37.008	ENSORLG00020019360	-	89	37.008	Oryzias_latipes_hni
ENSAMXG00000029689	-	83	37.008	ENSORLG00020008270	-	85	37.948	Oryzias_latipes_hni
ENSAMXG00000029689	-	79	38.333	ENSORLG00020018037	-	87	38.333	Oryzias_latipes_hni
ENSAMXG00000029689	-	76	43.706	ENSPKIG00000021000	-	91	43.783	Paramormyrops_kingsleyae
ENSAMXG00000029689	-	81	43.894	ENSPKIG00000000452	-	92	43.894	Paramormyrops_kingsleyae
ENSAMXG00000029689	-	81	53.300	ENSPNAG00000003267	-	89	53.300	Pygocentrus_nattereri
ENSAMXG00000029689	-	77	61.053	ENSPNAG00000014076	-	88	61.053	Pygocentrus_nattereri