EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000029829 (Gene tree)
Gene ID: 111190800
Gene Symbol: -
Alias: -
Full Name: zinc finger CCHC-type containing 3
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 1230 bases
Position: chrAPWO02002343.1:24503-25732
Accession: 111190800
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000044683	zf-CCHC	PF00098.23	1e-06	1	2
ENSAMXP00000044683	zf-CCHC	PF00098.23	1e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000031167	-	1230	XM_022664498	ENSAMXP00000044683	409 (aa)	XP_022520219	UPI000BBDA968

Gene Model

Click here to download ENSAMXG00000029829's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000029829's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000029829	-	56	60.088	ENSAMXG00000037658	-	68	60.088
ENSAMXG00000029829	-	65	55.805	ENSAMXG00000035044	-	73	55.805
ENSAMXG00000029829	-	61	54.545	ENSAMXG00000040095	-	71	54.545
ENSAMXG00000029829	-	55	55.752	ENSAMXG00000040142	-	60	55.752

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000029829	-	58	30.992	ENSG00000247315	ZCCHC3	62	30.800	Homo_sapiens
ENSAMXG00000029829	-	58	30.992	ENSAMEG00000013999	ZCCHC3	84	30.268	Ailuropoda_melanoleuca
ENSAMXG00000029829	-	58	30.992	ENSANAG00000013484	ZCCHC3	60	30.992	Aotus_nancymaae
ENSAMXG00000029829	-	57	31.799	ENSBTAG00000002116	ZCCHC3	62	30.677	Bos_taurus
ENSAMXG00000029829	-	58	30.992	ENSCJAG00000020839	ZCCHC3	60	30.992	Callithrix_jacchus
ENSAMXG00000029829	-	58	30.992	ENSCAFG00000025206	ZCCHC3	86	30.992	Canis_familiaris
ENSAMXG00000029829	-	58	31.120	ENSCAFG00020004076	ZCCHC3	63	30.315	Canis_lupus_dingo
ENSAMXG00000029829	-	55	32.314	ENSCHIG00000009882	ZCCHC3	60	30.992	Capra_hircus
ENSAMXG00000029829	-	58	30.992	ENSCPOG00000023974	ZCCHC3	61	30.992	Cavia_porcellus
ENSAMXG00000029829	-	58	30.992	ENSCCAG00000016869	ZCCHC3	60	30.992	Cebus_capucinus
ENSAMXG00000029829	-	58	30.992	ENSCATG00000022200	ZCCHC3	60	30.992	Cercocebus_atys
ENSAMXG00000029829	-	58	30.992	ENSCLAG00000000269	ZCCHC3	60	30.992	Chinchilla_lanigera
ENSAMXG00000029829	-	58	30.992	ENSCSAG00000018761	ZCCHC3	60	30.992	Chlorocebus_sabaeus
ENSAMXG00000029829	-	58	30.992	ENSCANG00000010812	ZCCHC3	87	30.992	Colobus_angolensis_palliatus
ENSAMXG00000029829	-	58	30.579	ENSCGRG00001009163	-	60	30.579	Cricetulus_griseus_chok1gshd
ENSAMXG00000029829	-	57	31.513	ENSCGRG00001011895	-	65	31.513	Cricetulus_griseus_chok1gshd
ENSAMXG00000029829	-	57	31.513	ENSCGRG00000008273	-	65	31.513	Cricetulus_griseus_crigri
ENSAMXG00000029829	-	58	30.992	ENSDNOG00000047357	ZCCHC3	60	30.992	Dasypus_novemcinctus
ENSAMXG00000029829	-	58	30.992	ENSEASG00005003629	ZCCHC3	62	30.800	Equus_asinus_asinus
ENSAMXG00000029829	-	58	30.992	ENSECAG00000001035	ZCCHC3	62	30.800	Equus_caballus
ENSAMXG00000029829	-	58	30.992	ENSFCAG00000026760	ZCCHC3	59	30.992	Felis_catus
ENSAMXG00000029829	-	55	51.101	ENSHBUG00000005879	-	83	51.101	Haplochromis_burtoni
ENSAMXG00000029829	-	58	30.992	ENSHGLG00000019351	ZCCHC3	60	30.992	Heterocephalus_glaber_female
ENSAMXG00000029829	-	58	30.992	ENSHGLG00100009699	ZCCHC3	69	30.992	Heterocephalus_glaber_male
ENSAMXG00000029829	-	64	31.047	ENSIPUG00000000506	-	68	31.047	Ictalurus_punctatus
ENSAMXG00000029829	-	58	30.992	ENSJJAG00000020375	Zcchc3	61	30.645	Jaculus_jaculus
ENSAMXG00000029829	-	55	31.799	ENSLACG00000002864	-	77	30.932	Latimeria_chalumnae
ENSAMXG00000029829	-	50	30.000	ENSLACG00000000032	-	58	30.000	Latimeria_chalumnae
ENSAMXG00000029829	-	50	30.918	ENSLACG00000022551	-	53	30.918	Latimeria_chalumnae
ENSAMXG00000029829	-	58	30.992	ENSLAFG00000030593	ZCCHC3	89	30.992	Loxodonta_africana
ENSAMXG00000029829	-	58	30.992	ENSMFAG00000044780	ZCCHC3	60	30.992	Macaca_fascicularis
ENSAMXG00000029829	-	58	30.992	ENSMMUG00000038935	ZCCHC3	60	30.992	Macaca_mulatta
ENSAMXG00000029829	-	58	30.992	ENSMNEG00000000405	ZCCHC3	60	30.992	Macaca_nemestrina
ENSAMXG00000029829	-	59	49.206	ENSMZEG00005021211	-	64	49.206	Maylandia_zebra
ENSAMXG00000029829	-	55	32.174	ENSMICG00000031267	ZCCHC3	60	30.992	Microcebus_murinus
ENSAMXG00000029829	-	58	30.992	ENSMOCG00000002870	Zcchc3	61	30.992	Microtus_ochrogaster
ENSAMXG00000029829	-	57	49.787	ENSMMOG00000004516	-	71	49.787	Mola_mola
ENSAMXG00000029829	-	58	30.579	MGP_CAROLIEiJ_G0024454	Zcchc3	60	30.579	Mus_caroli
ENSAMXG00000029829	-	55	31.739	ENSMUSG00000074682	Zcchc3	60	30.579	Mus_musculus
ENSAMXG00000029829	-	55	31.739	MGP_PahariEiJ_G0025898	Zcchc3	60	30.579	Mus_pahari
ENSAMXG00000029829	-	58	30.579	MGP_SPRETEiJ_G0025375	Zcchc3	60	30.579	Mus_spretus
ENSAMXG00000029829	-	55	32.174	ENSNGAG00000006074	Zcchc3	59	32.174	Nannospalax_galili
ENSAMXG00000029829	-	58	41.322	ENSNBRG00000016105	-	54	41.322	Neolamprologus_brichardi
ENSAMXG00000029829	-	58	30.165	ENSNLEG00000009533	ZCCHC3	54	30.660	Nomascus_leucogenys
ENSAMXG00000029829	-	55	32.314	ENSOPRG00000005081	ZCCHC3	58	32.218	Ochotona_princeps
ENSAMXG00000029829	-	58	30.992	ENSODEG00000010730	ZCCHC3	62	30.800	Octodon_degus
ENSAMXG00000029829	-	58	30.992	ENSOCUG00000017024	ZCCHC3	64	30.992	Oryctolagus_cuniculus
ENSAMXG00000029829	-	58	30.992	ENSOGAG00000025208	ZCCHC3	59	30.992	Otolemur_garnettii
ENSAMXG00000029829	-	58	30.992	ENSOARG00000019161	ZCCHC3	84	30.992	Ovis_aries
ENSAMXG00000029829	-	58	30.992	ENSPPAG00000010453	-	94	31.076	Pan_paniscus
ENSAMXG00000029829	-	58	30.992	ENSPPRG00000014724	ZCCHC3	60	30.992	Panthera_pardus
ENSAMXG00000029829	-	58	30.544	ENSPTIG00000009393	ZCCHC3	98	30.544	Panthera_tigris_altaica
ENSAMXG00000029829	-	55	32.174	ENSPTRG00000047645	ZCCHC3	59	32.218	Pan_troglodytes
ENSAMXG00000029829	-	58	30.992	ENSPANG00000013450	ZCCHC3	60	30.992	Papio_anubis
ENSAMXG00000029829	-	58	30.579	ENSPEMG00000009059	Zcchc3	61	30.579	Peromyscus_maniculatus_bairdii
ENSAMXG00000029829	-	60	30.800	ENSPCOG00000012289	ZCCHC3	62	30.800	Propithecus_coquereli
ENSAMXG00000029829	-	56	31.466	ENSRNOG00000007520	Zcchc3	58	31.466	Rattus_norvegicus
ENSAMXG00000029829	-	58	30.992	ENSRBIG00000029757	ZCCHC3	60	30.992	Rhinopithecus_bieti
ENSAMXG00000029829	-	58	30.992	ENSRROG00000005210	ZCCHC3	60	30.992	Rhinopithecus_roxellana
ENSAMXG00000029829	-	58	30.992	ENSSSCG00000007211	ZCCHC3	60	30.992	Sus_scrofa
ENSAMXG00000029829	-	58	30.992	ENSTTRG00000008511	ZCCHC3	60	30.992	Tursiops_truncatus
ENSAMXG00000029829	-	55	31.441	ENSVPAG00000011267	-	93	31.441	Vicugna_pacos