EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000029911 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 1271 bases
Position: chrAPWO02001740.1:20134-21404
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000050635	MMR_HSR1	PF01926.23	9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000035702	-	477	-	ENSAMXP00000050635	158 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000029911's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000029911's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000029911	-	73	87.069	ENSAMXG00000038335	-	51	87.069
ENSAMXG00000029911	-	75	81.356	ENSAMXG00000038694	-	78	81.356
ENSAMXG00000029911	-	80	53.390	ENSAMXG00000036317	-	56	53.390
ENSAMXG00000029911	-	73	48.276	ENSAMXG00000030826	-	56	48.276
ENSAMXG00000029911	-	73	87.069	ENSAMXG00000033886	-	50	87.069
ENSAMXG00000029911	-	82	70.677	ENSAMXG00000041148	-	52	70.677
ENSAMXG00000029911	-	75	47.458	ENSAMXG00000036272	-	57	46.154
ENSAMXG00000029911	-	94	68.376	ENSAMXG00000002562	-	85	65.600
ENSAMXG00000029911	-	84	42.857	ENSAMXG00000019109	-	59	42.857
ENSAMXG00000029911	-	82	50.725	ENSAMXG00000040298	-	56	50.725
ENSAMXG00000029911	-	58	45.055	ENSAMXG00000031683	-	52	45.055
ENSAMXG00000029911	-	78	46.774	ENSAMXG00000031676	-	71	46.774
ENSAMXG00000029911	-	75	51.261	ENSAMXG00000033160	-	52	51.261
ENSAMXG00000029911	-	68	42.202	ENSAMXG00000009216	-	50	42.202
ENSAMXG00000029911	-	75	53.390	ENSAMXG00000038457	-	54	52.542
ENSAMXG00000029911	-	72	64.035	ENSAMXG00000041888	-	55	64.035
ENSAMXG00000029911	-	73	53.509	ENSAMXG00000038070	-	55	53.509
ENSAMXG00000029911	-	74	43.590	ENSAMXG00000031086	-	53	43.590
ENSAMXG00000029911	-	82	47.899	ENSAMXG00000038580	-	52	47.899
ENSAMXG00000029911	-	75	50.847	ENSAMXG00000043950	-	57	50.847
ENSAMXG00000029911	-	72	47.788	ENSAMXG00000031180	-	50	47.788
ENSAMXG00000029911	-	72	56.140	ENSAMXG00000042848	-	56	56.140
ENSAMXG00000029911	-	75	52.101	ENSAMXG00000026503	-	50	52.101
ENSAMXG00000029911	-	71	50.000	ENSAMXG00000034405	-	78	50.000
ENSAMXG00000029911	-	69	53.211	ENSAMXG00000041745	-	50	53.211
ENSAMXG00000029911	-	56	35.870	ENSAMXG00000035821	-	88	35.870
ENSAMXG00000029911	-	72	49.123	ENSAMXG00000033374	-	76	49.123
ENSAMXG00000029911	-	81	52.727	ENSAMXG00000035621	-	54	52.727
ENSAMXG00000029911	-	78	66.400	ENSAMXG00000037339	-	86	66.400
ENSAMXG00000029911	-	70	53.153	ENSAMXG00000042243	-	53	53.153
ENSAMXG00000029911	-	86	45.070	ENSAMXG00000037755	-	73	45.070
ENSAMXG00000029911	-	73	50.435	ENSAMXG00000035925	-	51	50.435
ENSAMXG00000029911	-	79	50.400	ENSAMXG00000038000	-	50	50.400
ENSAMXG00000029911	-	75	52.941	ENSAMXG00000042475	-	74	52.941

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000029911	-	75	55.085	ENSAPOG00000001262	-	57	55.085	Acanthochromis_polyacanthus
ENSAMXG00000029911	-	72	60.526	ENSAPOG00000007361	-	64	60.526	Acanthochromis_polyacanthus
ENSAMXG00000029911	-	72	52.632	ENSACIG00000000976	-	57	52.632	Amphilophus_citrinellus
ENSAMXG00000029911	-	71	52.679	ENSACIG00000014745	-	50	52.679	Amphilophus_citrinellus
ENSAMXG00000029911	-	73	48.276	ENSACIG00000001465	-	70	48.276	Amphilophus_citrinellus
ENSAMXG00000029911	-	73	50.862	ENSACIG00000008666	-	56	50.862	Amphilophus_citrinellus
ENSAMXG00000029911	-	86	48.175	ENSACIG00000001596	-	51	48.175	Amphilophus_citrinellus
ENSAMXG00000029911	-	72	53.509	ENSACIG00000008001	-	50	53.509	Amphilophus_citrinellus
ENSAMXG00000029911	-	66	62.264	ENSAOCG00000012536	-	82	62.264	Amphiprion_ocellaris
ENSAMXG00000029911	-	72	60.526	ENSAOCG00000011143	-	67	60.526	Amphiprion_ocellaris
ENSAMXG00000029911	-	70	62.500	ENSAPEG00000003102	-	57	62.500	Amphiprion_percula
ENSAMXG00000029911	-	70	62.500	ENSAPEG00000018782	-	75	62.500	Amphiprion_percula
ENSAMXG00000029911	-	72	53.390	ENSATEG00000014028	-	53	53.390	Anabas_testudineus
ENSAMXG00000029911	-	75	55.932	ENSACLG00000023502	-	50	54.237	Astatotilapia_calliptera
ENSAMXG00000029911	-	73	56.522	ENSACLG00000003287	-	58	56.522	Astatotilapia_calliptera
ENSAMXG00000029911	-	59	42.553	ENSACLG00000005151	-	85	42.553	Astatotilapia_calliptera
ENSAMXG00000029911	-	75	54.206	ENSACLG00000017459	-	52	56.034	Astatotilapia_calliptera
ENSAMXG00000029911	-	77	62.097	ENSACLG00000021980	-	91	62.097	Astatotilapia_calliptera
ENSAMXG00000029911	-	72	60.870	ENSCVAG00000009808	-	50	60.870	Cyprinodon_variegatus
ENSAMXG00000029911	-	72	51.754	ENSCVAG00000021672	-	56	51.754	Cyprinodon_variegatus
ENSAMXG00000029911	-	76	60.000	ENSCVAG00000017220	-	72	60.000	Cyprinodon_variegatus
ENSAMXG00000029911	-	75	50.420	ENSCVAG00000019639	-	60	50.420	Cyprinodon_variegatus
ENSAMXG00000029911	-	72	62.393	ENSCVAG00000009848	-	59	62.393	Cyprinodon_variegatus
ENSAMXG00000029911	-	80	51.969	ENSDARG00000103883	si:ch1073-181h11.2	84	51.969	Danio_rerio
ENSAMXG00000029911	-	73	55.652	ENSDARG00000078182	zgc:194443	69	52.703	Danio_rerio
ENSAMXG00000029911	-	87	56.338	ENSDARG00000109228	FO680692.1	67	56.338	Danio_rerio
ENSAMXG00000029911	-	80	50.000	ENSDARG00000052900	zgc:153642	50	50.000	Danio_rerio
ENSAMXG00000029911	-	74	52.137	ENSDARG00000099508	CABZ01049362.1	51	52.137	Danio_rerio
ENSAMXG00000029911	-	79	64.706	ENSELUG00000015115	-	57	64.706	Esox_lucius
ENSAMXG00000029911	-	75	63.559	ENSELUG00000015180	-	57	63.559	Esox_lucius
ENSAMXG00000029911	-	78	57.258	ENSELUG00000012454	-	56	57.258	Esox_lucius
ENSAMXG00000029911	-	75	62.712	ENSELUG00000015016	-	52	62.712	Esox_lucius
ENSAMXG00000029911	-	75	64.407	ENSELUG00000015235	-	50	64.407	Esox_lucius
ENSAMXG00000029911	-	75	65.254	ENSFHEG00000009740	-	59	65.254	Fundulus_heteroclitus
ENSAMXG00000029911	-	82	62.791	ENSFHEG00000009715	-	56	62.791	Fundulus_heteroclitus
ENSAMXG00000029911	-	75	53.390	ENSFHEG00000009496	-	55	53.390	Fundulus_heteroclitus
ENSAMXG00000029911	-	70	62.500	ENSGMOG00000001269	-	54	62.500	Gadus_morhua
ENSAMXG00000029911	-	87	41.606	ENSGAFG00000003916	-	97	41.606	Gambusia_affinis
ENSAMXG00000029911	-	66	50.000	ENSGAFG00000000209	-	58	50.000	Gambusia_affinis
ENSAMXG00000029911	-	87	38.732	ENSGAFG00000002926	-	53	38.732	Gambusia_affinis
ENSAMXG00000029911	-	70	59.459	ENSGAFG00000018273	-	58	59.459	Gambusia_affinis
ENSAMXG00000029911	-	72	53.097	ENSGACG00000018283	zgc:113625	52	53.097	Gasterosteus_aculeatus
ENSAMXG00000029911	-	85	54.815	ENSHBUG00000009454	-	54	54.815	Haplochromis_burtoni
ENSAMXG00000029911	-	79	52.800	ENSHBUG00000005397	-	61	56.522	Haplochromis_burtoni
ENSAMXG00000029911	-	84	46.099	ENSHBUG00000008706	-	52	46.099	Haplochromis_burtoni
ENSAMXG00000029911	-	78	55.645	ENSHBUG00000019258	-	51	55.645	Haplochromis_burtoni
ENSAMXG00000029911	-	77	60.656	ENSHBUG00000017626	-	60	60.656	Haplochromis_burtoni
ENSAMXG00000029911	-	67	56.604	ENSHBUG00000023810	-	70	56.604	Haplochromis_burtoni
ENSAMXG00000029911	-	75	45.455	ENSHBUG00000010422	-	62	45.455	Haplochromis_burtoni
ENSAMXG00000029911	-	79	50.376	ENSHBUG00000006804	-	52	50.376	Haplochromis_burtoni
ENSAMXG00000029911	-	72	54.386	ENSHBUG00000002917	-	59	54.386	Haplochromis_burtoni
ENSAMXG00000029911	-	73	50.435	ENSHBUG00000004432	-	52	50.435	Haplochromis_burtoni
ENSAMXG00000029911	-	73	56.522	ENSHBUG00000023450	-	52	56.522	Haplochromis_burtoni
ENSAMXG00000029911	-	75	52.542	ENSIPUG00000008956	-	55	52.542	Ictalurus_punctatus
ENSAMXG00000029911	-	78	60.317	ENSKMAG00000001775	-	95	60.317	Kryptolebias_marmoratus
ENSAMXG00000029911	-	72	51.754	ENSLBEG00000028823	-	50	51.754	Labrus_bergylta
ENSAMXG00000029911	-	78	59.055	ENSLBEG00000000526	-	53	59.055	Labrus_bergylta
ENSAMXG00000029911	-	71	52.679	ENSLBEG00000011881	-	67	52.679	Labrus_bergylta
ENSAMXG00000029911	-	77	55.556	ENSLOCG00000011883	-	62	55.556	Lepisosteus_oculatus
ENSAMXG00000029911	-	78	54.310	ENSLOCG00000011925	-	58	54.310	Lepisosteus_oculatus
ENSAMXG00000029911	-	75	57.895	ENSLOCG00000000257	-	56	57.895	Lepisosteus_oculatus
ENSAMXG00000029911	-	78	54.783	ENSLOCG00000011853	-	53	54.783	Lepisosteus_oculatus
ENSAMXG00000029911	-	72	56.140	ENSLOCG00000017851	-	59	56.140	Lepisosteus_oculatus
ENSAMXG00000029911	-	75	52.542	ENSMAMG00000012463	-	52	52.542	Mastacembelus_armatus
ENSAMXG00000029911	-	80	54.762	ENSMZEG00005013350	-	60	54.762	Maylandia_zebra
ENSAMXG00000029911	-	77	62.097	ENSMZEG00005006466	-	76	62.097	Maylandia_zebra
ENSAMXG00000029911	-	79	49.624	ENSMZEG00005011564	-	52	49.624	Maylandia_zebra
ENSAMXG00000029911	-	74	59.836	ENSMZEG00005020549	-	80	59.836	Maylandia_zebra
ENSAMXG00000029911	-	73	60.684	ENSMZEG00005006491	-	59	60.684	Maylandia_zebra
ENSAMXG00000029911	-	55	45.652	ENSMZEG00005002838	-	80	45.652	Maylandia_zebra
ENSAMXG00000029911	-	72	66.667	ENSMMOG00000021432	-	59	66.667	Mola_mola
ENSAMXG00000029911	-	80	62.500	ENSMALG00000005969	-	63	62.500	Monopterus_albus
ENSAMXG00000029911	-	75	56.044	ENSNBRG00000020282	-	54	56.044	Neolamprologus_brichardi
ENSAMXG00000029911	-	72	47.788	ENSNBRG00000003572	-	56	47.788	Neolamprologus_brichardi
ENSAMXG00000029911	-	65	61.165	ENSNBRG00000024164	-	79	61.165	Neolamprologus_brichardi
ENSAMXG00000029911	-	78	57.258	ENSNBRG00000009327	zgc:113625	54	57.258	Neolamprologus_brichardi
ENSAMXG00000029911	-	72	52.212	ENSNBRG00000003521	-	50	52.212	Neolamprologus_brichardi
ENSAMXG00000029911	-	84	53.982	ENSONIG00000012665	-	53	53.982	Oreochromis_niloticus
ENSAMXG00000029911	-	73	60.345	ENSONIG00000005035	-	54	60.345	Oreochromis_niloticus
ENSAMXG00000029911	-	82	52.542	ENSONIG00000013606	-	55	52.542	Oreochromis_niloticus
ENSAMXG00000029911	-	85	49.138	ENSONIG00000011627	-	56	52.632	Oreochromis_niloticus
ENSAMXG00000029911	-	78	52.542	ENSONIG00000021012	-	55	52.542	Oreochromis_niloticus
ENSAMXG00000029911	-	80	56.349	ENSONIG00000020592	zgc:113625	52	56.349	Oreochromis_niloticus
ENSAMXG00000029911	-	91	51.200	ENSONIG00000020703	-	60	51.200	Oreochromis_niloticus
ENSAMXG00000029911	-	80	58.475	ENSONIG00000018006	-	58	58.475	Oreochromis_niloticus
ENSAMXG00000029911	-	80	50.400	ENSONIG00000000027	-	53	50.400	Oreochromis_niloticus
ENSAMXG00000029911	-	77	57.377	ENSONIG00000016493	-	55	57.377	Oreochromis_niloticus
ENSAMXG00000029911	-	72	66.667	ENSONIG00000016464	-	61	66.667	Oreochromis_niloticus
ENSAMXG00000029911	-	82	49.231	ENSPKIG00000017979	-	79	49.231	Paramormyrops_kingsleyae
ENSAMXG00000029911	-	74	55.556	ENSPKIG00000014114	-	57	55.556	Paramormyrops_kingsleyae
ENSAMXG00000029911	-	72	53.982	ENSPKIG00000018032	-	51	53.982	Paramormyrops_kingsleyae
ENSAMXG00000029911	-	78	62.903	ENSPMGG00000013352	-	60	62.903	Periophthalmus_magnuspinnatus
ENSAMXG00000029911	-	82	62.791	ENSPFOG00000018807	-	51	66.379	Poecilia_formosa
ENSAMXG00000029911	-	82	47.692	ENSPFOG00000001141	-	59	52.632	Poecilia_formosa
ENSAMXG00000029911	-	73	51.724	ENSPFOG00000004363	-	51	51.724	Poecilia_formosa
ENSAMXG00000029911	-	72	66.372	ENSPLAG00000017599	-	79	66.667	Poecilia_latipinna
ENSAMXG00000029911	-	84	46.212	ENSPLAG00000017835	-	50	44.531	Poecilia_latipinna
ENSAMXG00000029911	-	72	52.632	ENSPLAG00000010124	-	59	52.632	Poecilia_latipinna
ENSAMXG00000029911	-	81	59.375	ENSPLAG00000017588	-	77	59.375	Poecilia_latipinna
ENSAMXG00000029911	-	70	59.459	ENSPLAG00000017609	-	50	59.459	Poecilia_latipinna
ENSAMXG00000029911	-	81	59.375	ENSPMEG00000019918	-	77	59.375	Poecilia_mexicana
ENSAMXG00000029911	-	75	50.847	ENSPMEG00000007417	-	50	50.847	Poecilia_mexicana
ENSAMXG00000029911	-	70	56.757	ENSPMEG00000010870	-	52	56.757	Poecilia_mexicana
ENSAMXG00000029911	-	72	53.509	ENSPREG00000008135	-	51	53.509	Poecilia_reticulata
ENSAMXG00000029911	-	77	54.545	ENSPREG00000010680	zgc:113625	50	54.545	Poecilia_reticulata
ENSAMXG00000029911	-	73	47.414	ENSPREG00000015811	-	50	47.414	Poecilia_reticulata
ENSAMXG00000029911	-	75	49.153	ENSPREG00000003733	-	51	49.153	Poecilia_reticulata
ENSAMXG00000029911	-	73	50.862	ENSPREG00000008831	-	58	50.862	Poecilia_reticulata
ENSAMXG00000029911	-	75	49.153	ENSPREG00000005846	-	53	49.153	Poecilia_reticulata
ENSAMXG00000029911	-	70	52.252	ENSPREG00000006000	-	61	52.252	Poecilia_reticulata
ENSAMXG00000029911	-	72	66.667	ENSPNYG00000004876	-	59	66.667	Pundamilia_nyererei
ENSAMXG00000029911	-	72	56.522	ENSPNYG00000014719	zgc:113625	52	56.522	Pundamilia_nyererei
ENSAMXG00000029911	-	80	59.690	ENSPNYG00000004891	-	61	59.690	Pundamilia_nyererei
ENSAMXG00000029911	-	71	56.637	ENSPNYG00000005447	-	50	56.637	Pundamilia_nyererei
ENSAMXG00000029911	-	73	53.913	ENSPNYG00000005037	-	65	53.913	Pundamilia_nyererei
ENSAMXG00000029911	-	73	57.759	ENSPNYG00000013475	-	54	57.759	Pundamilia_nyererei
ENSAMXG00000029911	-	75	72.034	ENSPNAG00000014098	-	83	72.034	Pygocentrus_nattereri
ENSAMXG00000029911	-	85	50.746	ENSPNAG00000017621	-	52	50.746	Pygocentrus_nattereri
ENSAMXG00000029911	-	75	55.085	ENSPNAG00000017538	-	55	41.912	Pygocentrus_nattereri
ENSAMXG00000029911	-	78	54.032	ENSPNAG00000015718	-	78	54.032	Pygocentrus_nattereri
ENSAMXG00000029911	-	77	61.475	ENSPNAG00000014125	-	69	61.475	Pygocentrus_nattereri
ENSAMXG00000029911	-	73	57.391	ENSSFOG00015001400	-	60	57.391	Scleropages_formosus
ENSAMXG00000029911	-	96	43.791	ENSSFOG00015022985	-	57	43.791	Scleropages_formosus
ENSAMXG00000029911	-	73	61.739	ENSSFOG00015006012	-	58	61.739	Scleropages_formosus
ENSAMXG00000029911	-	85	50.725	ENSSFOG00015005185	-	72	50.725	Scleropages_formosus
ENSAMXG00000029911	-	70	50.909	ENSSDUG00000018996	-	51	50.909	Seriola_dumerili
ENSAMXG00000029911	-	63	41.414	ENSSDUG00000019892	-	70	41.096	Seriola_dumerili
ENSAMXG00000029911	-	80	60.630	ENSSDUG00000003691	-	54	60.630	Seriola_dumerili
ENSAMXG00000029911	-	56	57.955	ENSSDUG00000021711	-	58	57.955	Seriola_dumerili
ENSAMXG00000029911	-	75	61.157	ENSSLDG00000013130	-	92	61.157	Seriola_lalandi_dorsalis
ENSAMXG00000029911	-	84	46.970	ENSSLDG00000017256	-	52	46.970	Seriola_lalandi_dorsalis
ENSAMXG00000029911	-	73	61.864	ENSSLDG00000009698	-	94	61.864	Seriola_lalandi_dorsalis
ENSAMXG00000029911	-	77	62.602	ENSSPAG00000015591	-	77	62.602	Stegastes_partitus
ENSAMXG00000029911	-	73	52.101	ENSSPAG00000005792	-	55	52.101	Stegastes_partitus
ENSAMXG00000029911	-	75	62.810	ENSSPAG00000015600	-	69	62.810	Stegastes_partitus
ENSAMXG00000029911	-	85	44.928	ENSXCOG00000016293	-	58	44.928	Xiphophorus_couchianus
ENSAMXG00000029911	-	73	49.565	ENSXCOG00000016291	-	54	49.565	Xiphophorus_couchianus
ENSAMXG00000029911	-	76	58.678	ENSXCOG00000014519	-	85	58.678	Xiphophorus_couchianus
ENSAMXG00000029911	-	69	53.211	ENSXCOG00000018333	-	75	53.211	Xiphophorus_couchianus
ENSAMXG00000029911	-	75	51.695	ENSXMAG00000026760	-	64	51.695	Xiphophorus_maculatus