EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000030324 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 3210 bases
Position: chr3:31407009-31410218
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000039248	RVT_1	PF00078.27	7.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000033573	-	3210	-	ENSAMXP00000039248	1069 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000030324's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000030324's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000030324	-	99	40.938	ENSAMXG00000034228	-	91	40.938
ENSAMXG00000030324	-	93	43.238	ENSAMXG00000035203	-	89	43.238
ENSAMXG00000030324	-	94	41.865	ENSAMXG00000039541	-	88	41.865

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000030324	-	70	67.198	ENSACLG00000020851	-	100	67.198	Astatotilapia_calliptera
ENSAMXG00000030324	-	99	62.959	ENSMZEG00005018493	-	97	62.959	Maylandia_zebra
ENSAMXG00000030324	-	71	45.052	ENSORLG00015002388	-	96	45.052	Oryzias_latipes_hsok
ENSAMXG00000030324	-	84	44.858	ENSOMEG00000023989	-	99	44.858	Oryzias_melastigma
ENSAMXG00000030324	-	84	41.996	ENSSFOG00015018491	-	99	41.996	Scleropages_formosus
ENSAMXG00000030324	-	82	40.519	ENSSFOG00015009840	-	84	40.519	Scleropages_formosus
ENSAMXG00000030324	-	87	41.295	ENSSFOG00015000041	-	96	41.295	Scleropages_formosus
ENSAMXG00000030324	-	93	42.600	ENSSLDG00000012549	-	96	42.600	Seriola_lalandi_dorsalis
ENSAMXG00000030324	-	97	65.868	ENSTNIG00000000569	-	93	65.868	Tetraodon_nigroviridis