EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000030552 (Gene tree)
Gene ID: 103038625
Gene Symbol: zgc:162396 (1 of many)
Alias: fb62c07|si:ch211-31o18.2|wu:fb62c07
Full Name: putative methyltransferase DDB_G0268948
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 20826 bases
Position: chr19:26650497-26671322
Accession: 103038625
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000045556	Methyltransf_31	PF13847.6	3.9e-15	1	1
ENSAMXP00000044887	Methyltransf_31	PF13847.6	1.2e-14	1	1
ENSAMXP00000052744	Methyltransf_31	PF13847.6	4.4e-14	1	1
ENSAMXP00000045980	Methyltransf_31	PF13847.6	4.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000056824	-	3334	-	ENSAMXP00000045980	280 (aa)	-	-
ENSAMXT00000032499	-	816	XM_007260436	ENSAMXP00000045556	271 (aa)	XP_007260498	UPI000BBDCB2C
ENSAMXT00000050783	-	4038	-	ENSAMXP00000044887	271 (aa)	-	-
ENSAMXT00000032073	-	4547	XM_007260437	ENSAMXP00000052744	271 (aa)	XP_007260499	W5L7W1

Gene Model

Click here to download ENSAMXG00000030552's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000030552's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000030552	zgc:162396	99	41.912	ENSAMXG00000040257	zgc:162780	99	41.912
ENSAMXG00000030552	zgc:162396	94	72.266	ENSAMXG00000037578	zgc:162396	98	72.266

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000030552	zgc:162396	100	60.294	ENSAPOG00000015421	zgc:162396	100	60.294	Acanthochromis_polyacanthus
ENSAMXG00000030552	zgc:162396	100	61.765	ENSACIG00000015427	zgc:162396	100	61.765	Amphilophus_citrinellus
ENSAMXG00000030552	zgc:162396	100	60.662	ENSAOCG00000004131	zgc:162396	100	60.662	Amphiprion_ocellaris
ENSAMXG00000030552	zgc:162396	100	60.662	ENSAPEG00000008189	zgc:162396	100	60.662	Amphiprion_percula
ENSAMXG00000030552	zgc:162396	100	58.824	ENSATEG00000011813	zgc:162396	99	58.824	Anabas_testudineus
ENSAMXG00000030552	zgc:162396	99	45.896	ENSAPLG00000012593	-	99	45.896	Anas_platyrhynchos
ENSAMXG00000030552	zgc:162396	100	61.538	ENSACLG00000006906	zgc:162396	100	61.538	Astatotilapia_calliptera
ENSAMXG00000030552	zgc:162396	99	48.327	ENSCPBG00000002804	-	99	48.327	Chrysemys_picta_bellii
ENSAMXG00000030552	zgc:162396	99	33.579	ENSCING00000012960	-	99	33.579	Ciona_intestinalis
ENSAMXG00000030552	zgc:162396	99	61.993	ENSCVAG00000021429	zgc:162396	99	61.993	Cyprinodon_variegatus
ENSAMXG00000030552	zgc:162396	100	64.945	ENSDARG00000069549	zgc:162396	99	72.222	Danio_rerio
ENSAMXG00000030552	zgc:162396	99	70.000	ENSELUG00000005372	zgc:162396	99	70.000	Esox_lucius
ENSAMXG00000030552	zgc:162396	99	47.584	ENSFALG00000012826	-	99	47.584	Ficedula_albicollis
ENSAMXG00000030552	zgc:162396	99	62.731	ENSFHEG00000005224	-	99	62.731	Fundulus_heteroclitus
ENSAMXG00000030552	zgc:162396	99	44.981	ENSGALG00000047535	-	99	44.981	Gallus_gallus
ENSAMXG00000030552	zgc:162396	99	44.981	ENSGALG00000042073	-	99	44.981	Gallus_gallus
ENSAMXG00000030552	zgc:162396	99	44.981	ENSGALG00000050548	-	99	44.981	Gallus_gallus
ENSAMXG00000030552	zgc:162396	100	62.132	ENSGAFG00000018387	-	100	62.132	Gambusia_affinis
ENSAMXG00000030552	zgc:162396	99	61.624	ENSGACG00000002200	zgc:162396	96	61.624	Gasterosteus_aculeatus
ENSAMXG00000030552	zgc:162396	100	61.172	ENSHBUG00000017584	zgc:162396	100	61.172	Haplochromis_burtoni
ENSAMXG00000030552	zgc:162396	100	72.325	ENSIPUG00000001159	zgc:162396	100	72.325	Ictalurus_punctatus
ENSAMXG00000030552	zgc:162396	100	71.956	ENSIPUG00000001171	-	100	71.956	Ictalurus_punctatus
ENSAMXG00000030552	zgc:162396	100	72.325	ENSIPUG00000001213	-	100	72.325	Ictalurus_punctatus
ENSAMXG00000030552	zgc:162396	99	59.041	ENSKMAG00000018426	-	99	59.041	Kryptolebias_marmoratus
ENSAMXG00000030552	zgc:162396	100	63.235	ENSLBEG00000026502	zgc:162396	100	63.235	Labrus_bergylta
ENSAMXG00000030552	zgc:162396	100	50.554	ENSLACG00000009261	-	100	50.554	Latimeria_chalumnae
ENSAMXG00000030552	zgc:162396	100	61.765	ENSMAMG00000013213	zgc:162396	100	61.765	Mastacembelus_armatus
ENSAMXG00000030552	zgc:162396	100	61.538	ENSMZEG00005000798	zgc:162396	100	61.538	Maylandia_zebra
ENSAMXG00000030552	zgc:162396	99	43.750	ENSMGAG00000003269	-	99	43.750	Meleagris_gallopavo
ENSAMXG00000030552	zgc:162396	99	55.351	ENSMMOG00000005445	zgc:162396	99	55.351	Mola_mola
ENSAMXG00000030552	zgc:162396	100	61.765	ENSNBRG00000014954	zgc:162396	100	61.765	Neolamprologus_brichardi
ENSAMXG00000030552	zgc:162396	100	61.765	ENSONIG00000004463	zgc:162396	100	61.765	Oreochromis_niloticus
ENSAMXG00000030552	zgc:162396	99	46.840	ENSOANG00000021828	-	99	44.727	Ornithorhynchus_anatinus
ENSAMXG00000030552	zgc:162396	65	41.143	ENSOANG00000015675	-	99	41.143	Ornithorhynchus_anatinus
ENSAMXG00000030552	zgc:162396	60	65.244	ENSORLG00000018107	zgc:162396	95	65.244	Oryzias_latipes
ENSAMXG00000030552	zgc:162396	99	62.731	ENSORLG00015008543	zgc:162396	99	62.731	Oryzias_latipes_hsok
ENSAMXG00000030552	zgc:162396	99	61.993	ENSOMEG00000010640	zgc:162396	98	63.786	Oryzias_melastigma
ENSAMXG00000030552	zgc:162396	100	68.015	ENSPKIG00000014798	zgc:162396	100	68.015	Paramormyrops_kingsleyae
ENSAMXG00000030552	zgc:162396	99	44.981	ENSPSIG00000016701	-	99	44.981	Pelodiscus_sinensis
ENSAMXG00000030552	zgc:162396	90	39.344	ENSPMAG00000003743	zgc:162396	100	39.344	Petromyzon_marinus
ENSAMXG00000030552	zgc:162396	83	38.496	ENSPMAG00000004744	zgc:162396	98	38.496	Petromyzon_marinus
ENSAMXG00000030552	zgc:162396	73	41.709	ENSPMAG00000006166	zgc:162396	100	41.709	Petromyzon_marinus
ENSAMXG00000030552	zgc:162396	100	62.132	ENSPFOG00000002666	zgc:162396	100	62.132	Poecilia_formosa
ENSAMXG00000030552	zgc:162396	100	62.500	ENSPLAG00000010281	zgc:162396	100	62.500	Poecilia_latipinna
ENSAMXG00000030552	zgc:162396	100	62.132	ENSPMEG00000002349	zgc:162396	100	62.132	Poecilia_mexicana
ENSAMXG00000030552	zgc:162396	100	62.500	ENSPREG00000016491	zgc:162396	100	62.500	Poecilia_reticulata
ENSAMXG00000030552	zgc:162396	100	61.172	ENSPNYG00000009858	zgc:162396	100	61.172	Pundamilia_nyererei
ENSAMXG00000030552	zgc:162396	99	77.778	ENSPNAG00000004920	zgc:162396	100	77.778	Pygocentrus_nattereri
ENSAMXG00000030552	zgc:162396	100	80.812	ENSPNAG00000026074	zgc:162396	100	80.812	Pygocentrus_nattereri
ENSAMXG00000030552	zgc:162396	99	36.331	ENSSHAG00000000950	-	99	36.331	Sarcophilus_harrisii
ENSAMXG00000030552	zgc:162396	100	66.790	ENSSFOG00015023495	zgc:162396	100	66.790	Scleropages_formosus
ENSAMXG00000030552	zgc:162396	99	68.148	ENSSFOG00015023503	zgc:162396	99	68.148	Scleropages_formosus
ENSAMXG00000030552	zgc:162396	100	62.500	ENSSMAG00000004484	zgc:162396	100	62.500	Scophthalmus_maximus
ENSAMXG00000030552	zgc:162396	100	64.338	ENSSDUG00000010278	zgc:162396	100	64.338	Seriola_dumerili
ENSAMXG00000030552	zgc:162396	100	64.706	ENSSLDG00000021423	zgc:162396	100	64.706	Seriola_lalandi_dorsalis
ENSAMXG00000030552	zgc:162396	99	46.468	ENSSPUG00000015532	-	84	46.468	Sphenodon_punctatus
ENSAMXG00000030552	zgc:162396	100	60.294	ENSSPAG00000005505	zgc:162396	100	60.294	Stegastes_partitus
ENSAMXG00000030552	zgc:162396	99	45.725	ENSTGUG00000003861	-	100	45.725	Taeniopygia_guttata
ENSAMXG00000030552	zgc:162396	68	42.623	ENSTGUG00000015044	-	98	42.623	Taeniopygia_guttata
ENSAMXG00000030552	zgc:162396	99	59.851	ENSTRUG00000007506	zgc:162396	99	59.851	Takifugu_rubripes
ENSAMXG00000030552	zgc:162396	100	51.471	ENSTRUG00000010648	-	99	51.471	Takifugu_rubripes
ENSAMXG00000030552	zgc:162396	99	57.721	ENSTNIG00000001485	zgc:162396	100	57.721	Tetraodon_nigroviridis
ENSAMXG00000030552	zgc:162396	100	42.804	ENSXETG00000033236	-	97	42.804	Xenopus_tropicalis
ENSAMXG00000030552	zgc:162396	100	62.132	ENSXCOG00000014529	zgc:162396	100	62.132	Xiphophorus_couchianus
ENSAMXG00000030552	zgc:162396	100	61.765	ENSXMAG00000023129	zgc:162396	100	61.765	Xiphophorus_maculatus