EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000030672 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 3067 bases
Position: chrAPWO02000027.1:2023978-2027044
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000048432	PARP	PF00644.20	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000034542	-	438	-	ENSAMXP00000048432	145 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000030672's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000030672's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000030672	-	79	60.870	ENSAMXG00000032512	gig2d	74	60.870
ENSAMXG00000030672	-	79	53.043	ENSAMXG00000026038	-	80	53.043
ENSAMXG00000030672	-	82	59.664	ENSAMXG00000026110	gig2d	79	59.664
ENSAMXG00000030672	-	77	56.250	ENSAMXG00000026111	-	51	56.250
ENSAMXG00000030672	-	92	59.524	ENSAMXG00000004144	-	84	59.524
ENSAMXG00000030672	-	83	62.602	ENSAMXG00000043196	-	84	62.602
ENSAMXG00000030672	-	79	56.410	ENSAMXG00000025547	gig2o	55	56.410
ENSAMXG00000030672	-	86	70.161	ENSAMXG00000016000	-	80	70.161
ENSAMXG00000030672	-	92	55.882	ENSAMXG00000025187	gig2p	62	55.882
ENSAMXG00000030672	-	83	53.719	ENSAMXG00000041087	-	80	53.719

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000030672	-	79	60.345	ENSAPOG00000002358	gig2p	64	60.345	Acanthochromis_polyacanthus
ENSAMXG00000030672	-	86	56.154	ENSAPOG00000010190	gig2h	84	56.154	Acanthochromis_polyacanthus
ENSAMXG00000030672	-	83	54.167	ENSACIG00000023385	-	75	58.333	Amphilophus_citrinellus
ENSAMXG00000030672	-	84	54.098	ENSACIG00000009062	-	85	59.016	Amphilophus_citrinellus
ENSAMXG00000030672	-	81	61.345	ENSACIG00000006917	-	74	61.345	Amphilophus_citrinellus
ENSAMXG00000030672	-	86	57.143	ENSACIG00000006934	gig2p	60	57.143	Amphilophus_citrinellus
ENSAMXG00000030672	-	79	64.348	ENSACIG00000018452	-	74	64.348	Amphilophus_citrinellus
ENSAMXG00000030672	-	79	62.069	ENSAOCG00000003416	gig2p	51	62.069	Amphiprion_ocellaris
ENSAMXG00000030672	-	95	61.538	ENSAOCG00000010944	-	72	61.538	Amphiprion_ocellaris
ENSAMXG00000030672	-	79	62.069	ENSAPEG00000017256	gig2p	51	62.069	Amphiprion_percula
ENSAMXG00000030672	-	81	62.500	ENSATEG00000003250	gig2p	56	62.500	Anabas_testudineus
ENSAMXG00000030672	-	79	64.655	ENSATEG00000003163	gig2p	75	64.655	Anabas_testudineus
ENSAMXG00000030672	-	94	56.115	ENSATEG00000003229	gig2p	68	56.115	Anabas_testudineus
ENSAMXG00000030672	-	84	54.918	ENSATEG00000003204	gig2p	74	54.918	Anabas_testudineus
ENSAMXG00000030672	-	81	59.664	ENSACLG00000006461	-	53	59.664	Astatotilapia_calliptera
ENSAMXG00000030672	-	81	61.017	ENSACLG00000019044	gig2g	82	61.017	Astatotilapia_calliptera
ENSAMXG00000030672	-	84	58.065	ENSCVAG00000006821	gig2p	73	58.065	Cyprinodon_variegatus
ENSAMXG00000030672	-	81	57.500	ENSCVAG00000006837	gig2p	57	57.500	Cyprinodon_variegatus
ENSAMXG00000030672	-	86	58.400	ENSCVAG00000003718	-	82	58.400	Cyprinodon_variegatus
ENSAMXG00000030672	-	80	62.931	ENSCVAG00000003734	-	85	62.931	Cyprinodon_variegatus
ENSAMXG00000030672	-	78	58.261	ENSDARG00000086903	gig2o	53	58.261	Danio_rerio
ENSAMXG00000030672	-	89	56.589	ENSDARG00000075757	gig2e	85	56.589	Danio_rerio
ENSAMXG00000030672	-	83	54.167	ENSDARG00000098463	gig2g	77	54.167	Danio_rerio
ENSAMXG00000030672	-	90	58.462	ENSDARG00000099735	gig2f	82	59.231	Danio_rerio
ENSAMXG00000030672	-	88	57.480	ENSDARG00000091730	gig2l	98	61.607	Danio_rerio
ENSAMXG00000030672	-	92	54.412	ENSDARG00000088260	gig2p	62	54.412	Danio_rerio
ENSAMXG00000030672	-	83	53.719	ENSDARG00000098772	gig2d	78	56.198	Danio_rerio
ENSAMXG00000030672	-	79	64.035	ENSDARG00000099325	gig2i	72	64.035	Danio_rerio
ENSAMXG00000030672	-	83	54.167	ENSDARG00000103444	gig2h	77	54.167	Danio_rerio
ENSAMXG00000030672	-	82	54.622	ENSDARG00000069769	gig2j	76	54.622	Danio_rerio
ENSAMXG00000030672	-	79	59.829	ENSELUG00000017166	gig2o	54	59.829	Esox_lucius
ENSAMXG00000030672	-	91	55.224	ENSFHEG00000017724	gig2p	60	55.224	Fundulus_heteroclitus
ENSAMXG00000030672	-	89	54.198	ENSFHEG00000017712	-	53	54.198	Fundulus_heteroclitus
ENSAMXG00000030672	-	78	61.739	ENSGAFG00000009453	gig2p	74	61.739	Gambusia_affinis
ENSAMXG00000030672	-	86	53.968	ENSGAFG00000009440	gig2p	82	53.968	Gambusia_affinis
ENSAMXG00000030672	-	61	57.955	ENSGACG00000010431	gig2p	100	57.955	Gasterosteus_aculeatus
ENSAMXG00000030672	-	81	59.664	ENSHBUG00000010473	-	67	59.664	Haplochromis_burtoni
ENSAMXG00000030672	-	81	62.712	ENSHBUG00000018939	-	79	62.712	Haplochromis_burtoni
ENSAMXG00000030672	-	83	55.833	ENSHBUG00000019410	-	84	59.167	Haplochromis_burtoni
ENSAMXG00000030672	-	78	61.739	ENSHBUG00000010491	gig2p	51	61.739	Haplochromis_burtoni
ENSAMXG00000030672	-	86	60.000	ENSIPUG00000001510	-	85	60.000	Ictalurus_punctatus
ENSAMXG00000030672	-	78	67.257	ENSIPUG00000000101	-	75	67.257	Ictalurus_punctatus
ENSAMXG00000030672	-	84	66.393	ENSIPUG00000005433	-	73	66.393	Ictalurus_punctatus
ENSAMXG00000030672	-	77	57.143	ENSIPUG00000001531	-	51	57.143	Ictalurus_punctatus
ENSAMXG00000030672	-	85	60.163	ENSIPUG00000007003	-	91	60.163	Ictalurus_punctatus
ENSAMXG00000030672	-	86	57.937	ENSIPUG00000022554	gig2p	57	58.400	Ictalurus_punctatus
ENSAMXG00000030672	-	85	61.789	ENSIPUG00000007035	-	73	61.789	Ictalurus_punctatus
ENSAMXG00000030672	-	88	53.077	ENSKMAG00000007923	-	57	53.077	Kryptolebias_marmoratus
ENSAMXG00000030672	-	79	57.759	ENSKMAG00000007907	gig2p	52	57.759	Kryptolebias_marmoratus
ENSAMXG00000030672	-	79	62.069	ENSLBEG00000018778	gig2p	55	62.069	Labrus_bergylta
ENSAMXG00000030672	-	91	54.074	ENSLBEG00000018765	-	61	54.074	Labrus_bergylta
ENSAMXG00000030672	-	79	65.812	ENSLACG00000015882	gig2p	54	65.812	Latimeria_chalumnae
ENSAMXG00000030672	-	92	60.000	ENSLACG00000000239	-	84	60.000	Latimeria_chalumnae
ENSAMXG00000030672	-	79	68.696	ENSLACG00000015833	-	78	68.696	Latimeria_chalumnae
ENSAMXG00000030672	-	77	59.821	ENSLACG00000018888	-	50	59.821	Latimeria_chalumnae
ENSAMXG00000030672	-	83	62.500	ENSLOCG00000005897	gig2e	52	62.500	Lepisosteus_oculatus
ENSAMXG00000030672	-	77	59.821	ENSLOCG00000005879	-	54	59.821	Lepisosteus_oculatus
ENSAMXG00000030672	-	81	56.667	ENSMAMG00000011285	gig2p	54	56.667	Mastacembelus_armatus
ENSAMXG00000030672	-	81	58.824	ENSMZEG00005013815	-	51	58.824	Maylandia_zebra
ENSAMXG00000030672	-	86	54.331	ENSMMOG00000005597	-	57	54.331	Mola_mola
ENSAMXG00000030672	-	84	57.258	ENSMMOG00000005594	gig2p	55	57.258	Mola_mola
ENSAMXG00000030672	-	85	57.600	ENSMALG00000008417	gig2p	55	57.600	Monopterus_albus
ENSAMXG00000030672	-	91	56.296	ENSNBRG00000000872	-	76	56.296	Neolamprologus_brichardi
ENSAMXG00000030672	-	85	60.976	ENSNBRG00000009062	-	76	60.976	Neolamprologus_brichardi
ENSAMXG00000030672	-	78	62.609	ENSNBRG00000000843	gig2p	58	62.609	Neolamprologus_brichardi
ENSAMXG00000030672	-	81	56.780	ENSNBRG00000009049	-	73	56.780	Neolamprologus_brichardi
ENSAMXG00000030672	-	81	61.538	ENSONIG00000009460	gig2h	83	61.538	Oreochromis_niloticus
ENSAMXG00000030672	-	91	61.739	ENSONIG00000011824	gig2p	78	61.739	Oreochromis_niloticus
ENSAMXG00000030672	-	90	55.639	ENSORLG00000010287	gig2p	61	55.639	Oryzias_latipes
ENSAMXG00000030672	-	90	51.128	ENSORLG00000028073	-	64	51.128	Oryzias_latipes
ENSAMXG00000030672	-	83	58.197	ENSORLG00020008422	gig2p	77	58.197	Oryzias_latipes_hni
ENSAMXG00000030672	-	84	52.419	ENSORLG00020008444	-	66	52.419	Oryzias_latipes_hni
ENSAMXG00000030672	-	83	58.197	ENSORLG00015022600	gig2p	88	58.197	Oryzias_latipes_hsok
ENSAMXG00000030672	-	83	54.310	ENSORLG00015008571	gig2g	82	54.310	Oryzias_latipes_hsok
ENSAMXG00000030672	-	90	51.128	ENSORLG00015022642	-	64	51.128	Oryzias_latipes_hsok
ENSAMXG00000030672	-	87	52.381	ENSOMEG00000015239	-	78	52.381	Oryzias_melastigma
ENSAMXG00000030672	-	79	54.783	ENSOMEG00000015253	-	77	54.783	Oryzias_melastigma
ENSAMXG00000030672	-	81	56.303	ENSOMEG00000007340	-	67	56.303	Oryzias_melastigma
ENSAMXG00000030672	-	84	54.918	ENSOMEG00000013589	-	71	54.918	Oryzias_melastigma
ENSAMXG00000030672	-	79	56.522	ENSOMEG00000013250	-	67	56.522	Oryzias_melastigma
ENSAMXG00000030672	-	84	67.213	ENSPKIG00000014390	-	91	67.213	Paramormyrops_kingsleyae
ENSAMXG00000030672	-	90	63.846	ENSPKIG00000000927	-	73	63.846	Paramormyrops_kingsleyae
ENSAMXG00000030672	-	88	63.359	ENSPKIG00000014377	-	98	63.359	Paramormyrops_kingsleyae
ENSAMXG00000030672	-	86	65.600	ENSPKIG00000003192	-	78	65.600	Paramormyrops_kingsleyae
ENSAMXG00000030672	-	83	71.074	ENSPKIG00000000863	-	74	71.074	Paramormyrops_kingsleyae
ENSAMXG00000030672	-	80	69.828	ENSPKIG00000001665	-	79	69.828	Paramormyrops_kingsleyae
ENSAMXG00000030672	-	84	68.033	ENSPKIG00000000878	-	93	68.033	Paramormyrops_kingsleyae
ENSAMXG00000030672	-	80	59.130	ENSPMAG00000005660	-	81	59.130	Petromyzon_marinus
ENSAMXG00000030672	-	87	55.556	ENSPMAG00000010332	-	81	55.556	Petromyzon_marinus
ENSAMXG00000030672	-	83	60.000	ENSPFOG00000005274	gig2g	88	60.000	Poecilia_formosa
ENSAMXG00000030672	-	88	57.937	ENSPFOG00000006191	gig2p	77	57.937	Poecilia_formosa
ENSAMXG00000030672	-	86	57.937	ENSPMEG00000018167	gig2p	57	57.937	Poecilia_mexicana
ENSAMXG00000030672	-	79	59.130	ENSPMEG00000007652	gig2h	75	57.500	Poecilia_mexicana
ENSAMXG00000030672	-	89	52.672	ENSPMEG00000018196	-	58	52.672	Poecilia_mexicana
ENSAMXG00000030672	-	86	52.756	ENSPREG00000005273	-	58	52.756	Poecilia_reticulata
ENSAMXG00000030672	-	78	61.739	ENSPREG00000005283	gig2p	71	61.739	Poecilia_reticulata
ENSAMXG00000030672	-	78	61.739	ENSPNYG00000021226	gig2p	51	61.739	Pundamilia_nyererei
ENSAMXG00000030672	-	83	61.667	ENSPNYG00000009627	-	67	61.667	Pundamilia_nyererei
ENSAMXG00000030672	-	81	58.824	ENSPNYG00000021214	-	66	58.824	Pundamilia_nyererei
ENSAMXG00000030672	-	83	63.559	ENSPNYG00000009654	-	91	63.559	Pundamilia_nyererei
ENSAMXG00000030672	-	82	61.345	ENSPNAG00000015845	gig2d	78	61.345	Pygocentrus_nattereri
ENSAMXG00000030672	-	92	56.716	ENSPNAG00000015811	gig2d	89	56.716	Pygocentrus_nattereri
ENSAMXG00000030672	-	77	62.500	ENSPNAG00000015816	-	51	62.500	Pygocentrus_nattereri
ENSAMXG00000030672	-	92	66.418	ENSPNAG00000021255	-	86	66.418	Pygocentrus_nattereri
ENSAMXG00000030672	-	86	58.730	ENSPNAG00000014831	gig2p	58	58.730	Pygocentrus_nattereri
ENSAMXG00000030672	-	79	55.172	ENSPNAG00000012118	gig2o	56	55.172	Pygocentrus_nattereri
ENSAMXG00000030672	-	85	59.350	ENSPNAG00000026634	-	93	59.350	Pygocentrus_nattereri
ENSAMXG00000030672	-	83	66.116	ENSPNAG00000026625	-	86	66.116	Pygocentrus_nattereri
ENSAMXG00000030672	-	77	54.464	ENSSFOG00015005862	-	51	54.464	Scleropages_formosus
ENSAMXG00000030672	-	87	59.524	ENSSFOG00015005869	-	58	59.524	Scleropages_formosus
ENSAMXG00000030672	-	78	60.000	ENSSFOG00015007829	gig2o	53	60.000	Scleropages_formosus
ENSAMXG00000030672	-	86	57.143	ENSSFOG00015009887	gig2p	58	57.143	Scleropages_formosus
ENSAMXG00000030672	-	88	61.739	ENSSFOG00015005900	-	89	61.739	Scleropages_formosus
ENSAMXG00000030672	-	79	60.870	ENSSFOG00015005876	-	72	60.870	Scleropages_formosus
ENSAMXG00000030672	-	86	50.394	ENSSMAG00000008329	-	59	52.555	Scophthalmus_maximus
ENSAMXG00000030672	-	99	49.655	ENSSMAG00000008317	gig2p	64	49.655	Scophthalmus_maximus
ENSAMXG00000030672	-	92	54.074	ENSSDUG00000018069	gig2p	63	54.074	Seriola_dumerili
ENSAMXG00000030672	-	79	61.207	ENSSDUG00000018079	-	68	61.207	Seriola_dumerili
ENSAMXG00000030672	-	89	54.198	ENSSLDG00000018358	gig2p	58	54.198	Seriola_lalandi_dorsalis
ENSAMXG00000030672	-	84	55.645	ENSSPAG00000005252	gig2p	64	55.645	Stegastes_partitus
ENSAMXG00000030672	-	79	62.069	ENSTRUG00000023008	gig2p	54	62.069	Takifugu_rubripes
ENSAMXG00000030672	-	97	61.404	ENSXETG00000032410	-	83	61.404	Xenopus_tropicalis
ENSAMXG00000030672	-	89	53.435	ENSXMAG00000019444	-	58	53.435	Xiphophorus_maculatus