EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000030697 (Gene tree)
Gene ID: 103032326
Gene Symbol: -
Alias: -
Full Name: sal-like protein 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 5574 bases
Position: chr17:10133306-10138879
Accession: 103032326
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000038122	zf-C2H2	PF00096.26	4.9e-23	1	4
ENSAMXP00000038122	zf-C2H2	PF00096.26	4.9e-23	2	4
ENSAMXP00000038122	zf-C2H2	PF00096.26	4.9e-23	3	4
ENSAMXP00000038122	zf-C2H2	PF00096.26	4.9e-23	4	4
ENSAMXP00000038122	zf-met	PF12874.7	2.1e-05	1	2
ENSAMXP00000038122	zf-met	PF12874.7	2.1e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000044735	-	2925	XM_015603646	ENSAMXP00000038122	730 (aa)	XP_015459132	UPI000BBDE3A9

Gene Model

Click here to download ENSAMXG00000030697's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000030697's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000030697	-	53	61.404	ENSOMEG00000019811	-	98	61.404	Oryzias_melastigma
ENSAMXG00000030697	-	55	52.055	ENSPNAG00000019887	-	98	52.055	Pygocentrus_nattereri