EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000030703 (Gene tree)
Gene ID: 103025321
Gene Symbol: hnrnph1l
Alias: fb19a06|wu:fb19a06|zgc:55399|zgc:85960
Full Name: heterogeneous nuclear ribonucleoprotein H-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 11000 bases
Position: chr14:6945360-6956359
Accession: 103025321
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000050148	zf-RNPHF	PF08080.12	1.8e-05	1	1
ENSAMXP00000050148	RRM_1	PF00076.22	9.6e-30	1	3
ENSAMXP00000050148	RRM_1	PF00076.22	9.6e-30	2	3
ENSAMXP00000050148	RRM_1	PF00076.22	9.6e-30	3	3
ENSAMXP00000038124	RRM_1	PF00076.22	5.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000040247	-	5072	XM_007254097	ENSAMXP00000050148	480 (aa)	XP_007254159	UPI000BBD5CE8
ENSAMXT00000038279	-	735	-	ENSAMXP00000038124	244 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000030703's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000030703's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000030703	hnrnph1l	69	40.785	ENSAMXG00000012270	grsf1	99	40.785
ENSAMXG00000030703	hnrnph1l	51	74.725	ENSAMXG00000021323	hnrnph3	98	58.629
ENSAMXG00000030703	hnrnph1l	85	81.884	ENSAMXG00000002483	hnrnph1	99	86.544

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000030703	hnrnph1l	84	83.578	ENSAPOG00000016614	hnrnph1	99	83.824	Acanthochromis_polyacanthus
ENSAMXG00000030703	hnrnph1l	79	86.737	ENSACIG00000008964	hnrnph1	97	86.472	Amphilophus_citrinellus
ENSAMXG00000030703	hnrnph1l	84	83.824	ENSAOCG00000008372	hnrnph1	99	83.578	Amphiprion_ocellaris
ENSAMXG00000030703	hnrnph1l	84	83.578	ENSAPEG00000012980	hnrnph1	99	83.333	Amphiprion_percula
ENSAMXG00000030703	hnrnph1l	84	83.578	ENSATEG00000002792	hnrnph1	99	83.333	Anabas_testudineus
ENSAMXG00000030703	hnrnph1l	84	71.523	ENSACAG00000016323	-	99	71.302	Anolis_carolinensis
ENSAMXG00000030703	hnrnph1l	71	85.154	ENSACLG00000003313	hnrnph1	96	83.193	Astatotilapia_calliptera
ENSAMXG00000030703	hnrnph1l	84	82.439	ENSCSEG00000015891	hnrnph1	99	82.927	Cynoglossus_semilaevis
ENSAMXG00000030703	hnrnph1l	84	82.310	ENSCVAG00000014097	hnrnph1	99	82.801	Cyprinodon_variegatus
ENSAMXG00000030703	hnrnph1l	85	82.310	ENSDARG00000040881	hnrnph1	99	83.538	Danio_rerio
ENSAMXG00000030703	hnrnph1l	81	89.313	ENSDARG00000005551	hnrnph1l	99	87.224	Danio_rerio
ENSAMXG00000030703	hnrnph1l	85	79.621	ENSELUG00000006715	hnrnph1	99	77.725	Esox_lucius
ENSAMXG00000030703	hnrnph1l	79	86.316	ENSELUG00000021437	-	99	88.421	Esox_lucius
ENSAMXG00000030703	hnrnph1l	84	82.801	ENSFHEG00000008474	hnrnph1	99	83.005	Fundulus_heteroclitus
ENSAMXG00000030703	hnrnph1l	80	80.348	ENSGMOG00000006782	hnrnph1	97	81.170	Gadus_morhua
ENSAMXG00000030703	hnrnph1l	84	82.064	ENSGAFG00000006280	hnrnph1	99	82.555	Gambusia_affinis
ENSAMXG00000030703	hnrnph1l	73	84.483	ENSGACG00000018352	hnrnph1	100	76.923	Gasterosteus_aculeatus
ENSAMXG00000030703	hnrnph1l	71	85.154	ENSHBUG00000010547	hnrnph1	96	83.193	Haplochromis_burtoni
ENSAMXG00000030703	hnrnph1l	84	74.882	ENSHCOG00000004513	hnrnph1	99	76.540	Hippocampus_comes
ENSAMXG00000030703	hnrnph1l	86	79.904	ENSIPUG00000018262	hnrnph1	99	83.010	Ictalurus_punctatus
ENSAMXG00000030703	hnrnph1l	85	91.400	ENSIPUG00000024047	hnrnph1l	98	91.484	Ictalurus_punctatus
ENSAMXG00000030703	hnrnph1l	84	81.463	ENSKMAG00000018802	hnrnph1	99	81.707	Kryptolebias_marmoratus
ENSAMXG00000030703	hnrnph1l	84	83.088	ENSLBEG00000027811	hnrnph1	99	82.843	Labrus_bergylta
ENSAMXG00000030703	hnrnph1l	79	80.098	ENSLOCG00000012510	hnrnph1	92	79.115	Lepisosteus_oculatus
ENSAMXG00000030703	hnrnph1l	84	53.846	ENSMMUG00000017392	-	81	56.704	Macaca_mulatta
ENSAMXG00000030703	hnrnph1l	84	54.312	ENSMNEG00000030544	-	81	57.263	Macaca_nemestrina
ENSAMXG00000030703	hnrnph1l	73	82.210	ENSMAMG00000011478	hnrnph1	98	82.514	Mastacembelus_armatus
ENSAMXG00000030703	hnrnph1l	84	82.555	ENSMZEG00005009791	hnrnph1	99	83.047	Maylandia_zebra
ENSAMXG00000030703	hnrnph1l	79	83.727	ENSMMOG00000009064	hnrnph1	98	83.465	Mola_mola
ENSAMXG00000030703	hnrnph1l	63	52.096	ENSMODG00000002200	-	99	50.599	Monodelphis_domestica
ENSAMXG00000030703	hnrnph1l	72	85.794	ENSMALG00000003999	hnrnph1	99	84.123	Monopterus_albus
ENSAMXG00000030703	hnrnph1l	71	85.154	ENSNBRG00000015406	hnrnph1	98	83.193	Neolamprologus_brichardi
ENSAMXG00000030703	hnrnph1l	84	82.801	ENSONIG00000017754	hnrnph1	99	83.292	Oreochromis_niloticus
ENSAMXG00000030703	hnrnph1l	84	80.918	ENSORLG00000006932	hnrnph1	99	80.193	Oryzias_latipes
ENSAMXG00000030703	hnrnph1l	84	80.676	ENSORLG00020007881	hnrnph1	99	79.952	Oryzias_latipes_hni
ENSAMXG00000030703	hnrnph1l	84	80.918	ENSORLG00015005306	hnrnph1	99	80.193	Oryzias_latipes_hsok
ENSAMXG00000030703	hnrnph1l	84	82.152	ENSOMEG00000009827	hnrnph1	98	85.146	Oryzias_melastigma
ENSAMXG00000030703	hnrnph1l	79	81.500	ENSPKIG00000009532	-	99	76.322	Paramormyrops_kingsleyae
ENSAMXG00000030703	hnrnph1l	85	86.375	ENSPKIG00000018203	hnrnph1l	99	84.672	Paramormyrops_kingsleyae
ENSAMXG00000030703	hnrnph1l	84	83.333	ENSPMGG00000012151	hnrnph1	99	83.088	Periophthalmus_magnuspinnatus
ENSAMXG00000030703	hnrnph1l	84	82.310	ENSPFOG00000004097	hnrnph1	99	82.801	Poecilia_formosa
ENSAMXG00000030703	hnrnph1l	84	82.310	ENSPLAG00000011771	hnrnph1	99	82.801	Poecilia_latipinna
ENSAMXG00000030703	hnrnph1l	84	82.310	ENSPMEG00000019446	hnrnph1	99	82.801	Poecilia_mexicana
ENSAMXG00000030703	hnrnph1l	84	82.310	ENSPREG00000005780	hnrnph1	99	82.801	Poecilia_reticulata
ENSAMXG00000030703	hnrnph1l	84	82.555	ENSPNYG00000000204	hnrnph1	99	83.047	Pundamilia_nyererei
ENSAMXG00000030703	hnrnph1l	85	94.840	ENSPNAG00000002784	hnrnph1l	99	94.840	Pygocentrus_nattereri
ENSAMXG00000030703	hnrnph1l	83	85.347	ENSPNAG00000000439	hnrnph1	98	85.347	Pygocentrus_nattereri
ENSAMXG00000030703	hnrnph1l	81	85.641	ENSSFOG00015016055	-	94	86.126	Scleropages_formosus
ENSAMXG00000030703	hnrnph1l	82	85.894	ENSSFOG00015022796	hnrnph1l	99	84.737	Scleropages_formosus
ENSAMXG00000030703	hnrnph1l	80	83.120	ENSSMAG00000007820	hnrnph1	97	84.115	Scophthalmus_maximus
ENSAMXG00000030703	hnrnph1l	84	83.824	ENSSDUG00000008785	hnrnph1	99	83.578	Seriola_dumerili
ENSAMXG00000030703	hnrnph1l	84	83.824	ENSSLDG00000010685	hnrnph1	99	83.578	Seriola_lalandi_dorsalis
ENSAMXG00000030703	hnrnph1l	84	82.482	ENSSPAG00000009921	hnrnph1	99	83.333	Stegastes_partitus
ENSAMXG00000030703	hnrnph1l	84	80.590	ENSTRUG00000020069	hnrnph1	99	81.572	Takifugu_rubripes
ENSAMXG00000030703	hnrnph1l	84	71.689	ENSXETG00000018321	hnrnph1	99	69.635	Xenopus_tropicalis
ENSAMXG00000030703	hnrnph1l	79	82.653	ENSXCOG00000009133	hnrnph1	97	80.867	Xiphophorus_couchianus
ENSAMXG00000030703	hnrnph1l	79	86.207	ENSXMAG00000021332	hnrnph1	98	85.942	Xiphophorus_maculatus