EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000030712 (Gene tree)
Gene ID: 103044636
Gene Symbol: rab13
Alias: cb764|hm:zeh0455
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 11441 bases
Position: chr11:6853309-6864749
Accession: 103044636
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000045546	MMR_HSR1	PF01926.23	9.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000037252	-	5411	XM_007231149	ENSAMXP00000045546	202 (aa)	XP_007231211	W5K2X8

Gene Model

Click here to download ENSAMXG00000030712's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000030712's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000030712	rab13	95	40.909	ENSAMXG00000013054	rab22a	97	40.909
ENSAMXG00000030712	rab13	83	47.024	ENSAMXG00000036772	rab2a	79	47.024
ENSAMXG00000030712	rab13	82	45.509	ENSAMXG00000042073	rab18b	81	45.509
ENSAMXG00000030712	rab13	87	48.864	ENSAMXG00000038243	si:dkey-16l2.16	88	54.054
ENSAMXG00000030712	rab13	78	46.203	ENSAMXG00000032547	rab6a	76	46.203
ENSAMXG00000030712	rab13	68	31.159	ENSAMXG00000043381	zgc:110197	77	31.159
ENSAMXG00000030712	rab13	95	33.333	ENSAMXG00000032663	si:dkey-13a21.4	92	33.333
ENSAMXG00000030712	rab13	86	47.399	ENSAMXG00000009935	rab30	70	47.399
ENSAMXG00000030712	rab13	88	52.542	ENSAMXG00000040604	-	99	48.756
ENSAMXG00000030712	rab13	97	45.192	ENSAMXG00000039737	RAB19	95	45.192
ENSAMXG00000030712	rab13	95	33.679	ENSAMXG00000033907	hrasb	95	33.679
ENSAMXG00000030712	rab13	86	43.103	ENSAMXG00000004630	rab6ba	92	43.103
ENSAMXG00000030712	rab13	84	32.222	ENSAMXG00000035770	rasl11a	71	32.222
ENSAMXG00000030712	rab13	96	33.163	ENSAMXG00000033390	rap1aa	98	33.163
ENSAMXG00000030712	rab13	81	39.881	ENSAMXG00000026059	RAB9A	83	39.881
ENSAMXG00000030712	rab13	60	30.597	ENSAMXG00000042798	arfrp1	65	30.597
ENSAMXG00000030712	rab13	84	38.506	ENSAMXG00000032027	rab7a	84	38.506
ENSAMXG00000030712	rab13	84	43.169	ENSAMXG00000040286	rab33ba	76	43.169
ENSAMXG00000030712	rab13	84	35.673	ENSAMXG00000033764	si:ch73-116o1.2	78	36.810
ENSAMXG00000030712	rab13	79	39.130	ENSAMXG00000014960	rab23	90	35.789
ENSAMXG00000030712	rab13	92	41.799	ENSAMXG00000036179	rab5aa	88	41.799
ENSAMXG00000030712	rab13	97	51.282	ENSAMXG00000003547	rab1ba	88	51.282
ENSAMXG00000030712	rab13	86	46.629	ENSAMXG00000041657	rab39ba	84	46.629
ENSAMXG00000030712	rab13	97	39.048	ENSAMXG00000040126	-	76	39.048
ENSAMXG00000030712	rab13	88	53.107	ENSAMXG00000039865	rab35b	99	49.254
ENSAMXG00000030712	rab13	96	33.333	ENSAMXG00000010334	rras	93	33.333
ENSAMXG00000030712	rab13	78	41.875	ENSAMXG00000043003	rab34a	62	41.875
ENSAMXG00000030712	rab13	97	38.942	ENSAMXG00000009640	rab14	97	38.942
ENSAMXG00000030712	rab13	96	49.500	ENSAMXG00000042419	rab3c	92	49.500
ENSAMXG00000030712	rab13	86	34.857	ENSAMXG00000012327	nras	89	35.802
ENSAMXG00000030712	rab13	96	39.896	ENSAMXG00000029712	rab25b	91	39.896
ENSAMXG00000030712	rab13	80	42.236	ENSAMXG00000037267	-	92	38.660
ENSAMXG00000030712	rab13	80	36.810	ENSAMXG00000010919	mras	94	32.653
ENSAMXG00000030712	rab13	65	34.586	ENSAMXG00000003504	rab20	63	30.000
ENSAMXG00000030712	rab13	71	38.255	ENSAMXG00000029130	-	78	38.255
ENSAMXG00000030712	rab13	81	40.000	ENSAMXG00000025889	RAB9A	83	40.000
ENSAMXG00000030712	rab13	78	40.000	ENSAMXG00000017266	rab36	61	40.000
ENSAMXG00000030712	rab13	85	50.000	ENSAMXG00000004882	rab12	70	50.000
ENSAMXG00000030712	rab13	88	53.672	ENSAMXG00000039486	zgc:171927	84	53.672
ENSAMXG00000030712	rab13	98	51.515	ENSAMXG00000034850	-	98	51.515
ENSAMXG00000030712	rab13	84	31.461	ENSAMXG00000041488	dnajc27	65	31.461
ENSAMXG00000030712	rab13	92	41.799	ENSAMXG00000035919	rab5ab	87	41.799
ENSAMXG00000030712	rab13	87	46.369	ENSAMXG00000003717	rab39bb	84	46.369
ENSAMXG00000030712	rab13	79	42.073	ENSAMXG00000040460	zgc:101559	67	42.073
ENSAMXG00000030712	rab13	80	43.478	ENSAMXG00000040879	rab25a	75	43.478
ENSAMXG00000030712	rab13	98	52.525	ENSAMXG00000032564	rab1ab	98	52.525
ENSAMXG00000030712	rab13	96	36.000	ENSAMXG00000034227	rab32b	94	36.000
ENSAMXG00000030712	rab13	84	55.294	ENSAMXG00000033470	RAB15	80	55.294
ENSAMXG00000030712	rab13	68	31.159	ENSAMXG00000037720	arl3	72	31.159
ENSAMXG00000030712	rab13	87	55.682	ENSAMXG00000043951	rab15	83	55.682
ENSAMXG00000030712	rab13	84	39.080	ENSAMXG00000031957	zgc:100918	85	39.080
ENSAMXG00000030712	rab13	88	36.264	ENSAMXG00000017217	kras	98	34.359
ENSAMXG00000030712	rab13	93	44.974	ENSAMXG00000024632	rab11al	89	44.974
ENSAMXG00000030712	rab13	82	47.590	ENSAMXG00000003155	rab11a	77	47.590
ENSAMXG00000030712	rab13	82	46.988	ENSAMXG00000037623	-	76	46.988
ENSAMXG00000030712	rab13	84	39.655	ENSAMXG00000002254	-	84	39.655
ENSAMXG00000030712	rab13	77	44.872	ENSAMXG00000033216	rab41	80	44.872
ENSAMXG00000030712	rab13	95	33.679	ENSAMXG00000035885	hrasa	95	33.679
ENSAMXG00000030712	rab13	80	42.236	ENSAMXG00000043717	rab5c	88	39.487
ENSAMXG00000030712	rab13	83	39.655	ENSAMXG00000036330	RAB38	81	39.655
ENSAMXG00000030712	rab13	88	41.304	ENSAMXG00000037428	-	87	41.304
ENSAMXG00000030712	rab13	72	38.667	ENSAMXG00000006018	rab34b	63	39.752
ENSAMXG00000030712	rab13	82	47.590	ENSAMXG00000042655	rab11bb	76	47.590
ENSAMXG00000030712	rab13	76	32.680	ENSAMXG00000040611	rabl2	67	32.680
ENSAMXG00000030712	rab13	97	38.756	ENSAMXG00000032729	rab42a	98	38.756
ENSAMXG00000030712	rab13	81	39.053	ENSAMXG00000026476	rab9b	75	39.053
ENSAMXG00000030712	rab13	79	34.524	ENSAMXG00000033069	si:cabz01085950.1	81	34.524

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000030712	rab13	99	78.713	ENSG00000143545	RAB13	99	78.713	Homo_sapiens
ENSAMXG00000030712	rab13	90	92.308	ENSACIG00000008584	rab13	88	92.308	Amphilophus_citrinellus
ENSAMXG00000030712	rab13	99	79.126	ENSANAG00000030247	-	99	79.126	Aotus_nancymaae
ENSAMXG00000030712	rab13	99	78.713	ENSBTAG00000017604	RAB13	99	78.713	Bos_taurus
ENSAMXG00000030712	rab13	80	48.148	WBGene00019317	K02E10.1	74	48.148	Caenorhabditis_elegans
ENSAMXG00000030712	rab13	90	84.153	ENSCJAG00000009933	-	99	78.713	Callithrix_jacchus
ENSAMXG00000030712	rab13	99	77.723	ENSCHIG00000022271	-	99	77.723	Capra_hircus
ENSAMXG00000030712	rab13	99	77.723	ENSCPOG00000011491	-	99	77.723	Cavia_porcellus
ENSAMXG00000030712	rab13	99	78.713	ENSCCAG00000028502	-	99	78.713	Cebus_capucinus
ENSAMXG00000030712	rab13	99	78.713	ENSCATG00000041779	-	99	78.713	Cercocebus_atys
ENSAMXG00000030712	rab13	99	77.723	ENSCLAG00000006603	-	99	77.723	Chinchilla_lanigera
ENSAMXG00000030712	rab13	99	78.713	ENSCANG00000036573	-	99	78.713	Colobus_angolensis_palliatus
ENSAMXG00000030712	rab13	99	78.218	ENSCGRG00001021505	Rab13	99	78.218	Cricetulus_griseus_chok1gshd
ENSAMXG00000030712	rab13	99	78.218	ENSCGRG00000012126	Rab13	99	78.218	Cricetulus_griseus_crigri
ENSAMXG00000030712	rab13	100	91.584	ENSCSEG00000002358	rab13	100	91.584	Cynoglossus_semilaevis
ENSAMXG00000030712	rab13	100	93.564	ENSDARG00000034771	rab13	100	93.564	Danio_rerio
ENSAMXG00000030712	rab13	99	79.703	ENSDORG00000001591	Rab13	99	79.703	Dipodomys_ordii
ENSAMXG00000030712	rab13	99	78.713	ENSEASG00005000683	-	99	78.713	Equus_asinus_asinus
ENSAMXG00000030712	rab13	99	78.713	ENSECAG00000016551	RAB13	99	78.713	Equus_caballus
ENSAMXG00000030712	rab13	100	75.369	ENSEEUG00000001233	-	100	75.369	Erinaceus_europaeus
ENSAMXG00000030712	rab13	100	92.079	ENSELUG00000012801	rab13	100	92.079	Esox_lucius
ENSAMXG00000030712	rab13	99	78.218	ENSFCAG00000045269	-	99	78.218	Felis_catus
ENSAMXG00000030712	rab13	65	89.394	ENSFDAG00000014469	-	100	89.394	Fukomys_damarensis
ENSAMXG00000030712	rab13	100	88.614	ENSFHEG00000021221	rab13	96	94.318	Fundulus_heteroclitus
ENSAMXG00000030712	rab13	100	92.574	ENSGACG00000011925	rab13	99	92.574	Gasterosteus_aculeatus
ENSAMXG00000030712	rab13	90	84.153	ENSGAGG00000000742	-	100	78.922	Gopherus_agassizii
ENSAMXG00000030712	rab13	99	78.713	ENSGGOG00000023693	RAB13	99	78.713	Gorilla_gorilla
ENSAMXG00000030712	rab13	99	77.114	ENSHGLG00000008749	RAB13	99	77.114	Heterocephalus_glaber_female
ENSAMXG00000030712	rab13	99	77.114	ENSHGLG00100013608	RAB13	99	77.114	Heterocephalus_glaber_male
ENSAMXG00000030712	rab13	100	87.624	ENSHCOG00000007440	rab13	97	96.045	Hippocampus_comes
ENSAMXG00000030712	rab13	100	92.079	ENSIPUG00000003199	rab13	100	92.079	Ictalurus_punctatus
ENSAMXG00000030712	rab13	99	79.703	ENSSTOG00000011222	-	99	79.703	Ictidomys_tridecemlineatus
ENSAMXG00000030712	rab13	99	78.713	ENSJJAG00000010575	Rab13	99	78.713	Jaculus_jaculus
ENSAMXG00000030712	rab13	100	86.634	ENSKMAG00000001908	rab13	100	86.634	Kryptolebias_marmoratus
ENSAMXG00000030712	rab13	100	92.079	ENSLBEG00000026779	rab13	100	92.079	Labrus_bergylta
ENSAMXG00000030712	rab13	88	76.271	ENSLACG00000008103	-	99	76.271	Latimeria_chalumnae
ENSAMXG00000030712	rab13	99	78.713	ENSMFAG00000041018	RAB13	99	78.713	Macaca_fascicularis
ENSAMXG00000030712	rab13	99	78.713	ENSMNEG00000028951	-	99	78.713	Macaca_nemestrina
ENSAMXG00000030712	rab13	99	78.713	ENSMLEG00000042247	-	99	78.713	Mandrillus_leucophaeus
ENSAMXG00000030712	rab13	100	91.584	ENSMAMG00000014602	rab13	100	91.584	Mastacembelus_armatus
ENSAMXG00000030712	rab13	99	77.723	ENSMAUG00000015713	Rab13	99	77.723	Mesocricetus_auratus
ENSAMXG00000030712	rab13	99	79.602	ENSMICG00000010340	-	99	79.602	Microcebus_murinus
ENSAMXG00000030712	rab13	99	79.208	ENSMOCG00000021448	Rab13	99	79.208	Microtus_ochrogaster
ENSAMXG00000030712	rab13	99	80.500	ENSMODG00000017295	-	84	80.500	Monodelphis_domestica
ENSAMXG00000030712	rab13	99	77.723	MGP_CAROLIEiJ_G0025227	Rab13	99	77.723	Mus_caroli
ENSAMXG00000030712	rab13	99	78.607	ENSMUSG00000027935	Rab13	99	78.607	Mus_musculus
ENSAMXG00000030712	rab13	100	77.723	MGP_PahariEiJ_G0026671	Rab13	100	77.723	Mus_pahari
ENSAMXG00000030712	rab13	99	78.109	ENSNGAG00000010309	Rab13	99	78.109	Nannospalax_galili
ENSAMXG00000030712	rab13	100	90.594	ENSNBRG00000004124	rab13	100	90.594	Neolamprologus_brichardi
ENSAMXG00000030712	rab13	99	78.713	ENSNLEG00000028944	-	97	81.675	Nomascus_leucogenys
ENSAMXG00000030712	rab13	99	79.703	ENSMEUG00000009667	-	99	79.703	Notamacropus_eugenii
ENSAMXG00000030712	rab13	63	89.764	ENSODEG00000012634	-	100	89.764	Octodon_degus
ENSAMXG00000030712	rab13	99	77.723	ENSODEG00000010443	-	99	77.723	Octodon_degus
ENSAMXG00000030712	rab13	100	88.119	ENSONIG00000006340	rab13	100	88.119	Oreochromis_niloticus
ENSAMXG00000030712	rab13	87	85.795	ENSOCUG00000006286	-	99	85.795	Oryctolagus_cuniculus
ENSAMXG00000030712	rab13	100	92.079	ENSOMEG00000008210	rab13	100	92.079	Oryzias_melastigma
ENSAMXG00000030712	rab13	99	78.218	ENSOGAG00000016969	-	99	78.218	Otolemur_garnettii
ENSAMXG00000030712	rab13	99	78.713	ENSPPAG00000028435	-	99	78.713	Pan_paniscus
ENSAMXG00000030712	rab13	99	78.218	ENSPPRG00000008865	-	99	78.218	Panthera_pardus
ENSAMXG00000030712	rab13	99	78.713	ENSPTRG00000001370	RAB13	99	78.713	Pan_troglodytes
ENSAMXG00000030712	rab13	99	78.713	ENSPANG00000004479	-	99	78.713	Papio_anubis
ENSAMXG00000030712	rab13	100	89.604	ENSPMGG00000007680	rab13	100	89.604	Periophthalmus_magnuspinnatus
ENSAMXG00000030712	rab13	62	79.545	ENSPEMG00000017353	-	99	79.545	Peromyscus_maniculatus_bairdii
ENSAMXG00000030712	rab13	99	79.703	ENSPCIG00000029350	-	99	79.703	Phascolarctos_cinereus
ENSAMXG00000030712	rab13	88	94.350	ENSPLAG00000005832	RAB13	95	94.350	Poecilia_latipinna
ENSAMXG00000030712	rab13	92	92.473	ENSPREG00000017567	rab13	100	89.604	Poecilia_reticulata
ENSAMXG00000030712	rab13	99	78.713	ENSPPYG00000000790	-	99	78.713	Pongo_abelii
ENSAMXG00000030712	rab13	99	80.100	ENSPCOG00000012189	-	99	80.100	Propithecus_coquereli
ENSAMXG00000030712	rab13	99	78.218	ENSPVAG00000011095	-	99	78.218	Pteropus_vampyrus
ENSAMXG00000030712	rab13	87	97.727	ENSPNAG00000004189	rab13	93	97.727	Pygocentrus_nattereri
ENSAMXG00000030712	rab13	99	77.723	ENSRNOG00000016733	Rab13	99	77.723	Rattus_norvegicus
ENSAMXG00000030712	rab13	99	79.208	ENSRBIG00000008552	-	99	79.208	Rhinopithecus_bieti
ENSAMXG00000030712	rab13	99	79.208	ENSRROG00000036885	-	99	79.208	Rhinopithecus_roxellana
ENSAMXG00000030712	rab13	99	79.602	ENSSBOG00000020342	-	99	79.602	Saimiri_boliviensis_boliviensis
ENSAMXG00000030712	rab13	99	80.693	ENSSHAG00000011866	-	99	80.693	Sarcophilus_harrisii
ENSAMXG00000030712	rab13	99	78.218	ENSSSCG00000006564	-	99	78.218	Sus_scrofa
ENSAMXG00000030712	rab13	100	93.069	ENSTRUG00000024177	rab13	100	93.069	Takifugu_rubripes
ENSAMXG00000030712	rab13	99	80.198	ENSTBEG00000012734	-	99	80.198	Tupaia_belangeri
ENSAMXG00000030712	rab13	99	78.713	ENSTTRG00000011183	-	99	78.713	Tursiops_truncatus
ENSAMXG00000030712	rab13	68	81.159	ENSXETG00000020729	rab13	100	73.913	Xenopus_tropicalis
ENSAMXG00000030712	rab13	88	93.220	ENSXCOG00000019533	rab13	95	93.220	Xiphophorus_couchianus