EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000030715 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 8527 bases
Position: chr12:3165354-3173880
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000039940	MMR_HSR1	PF01926.23	3.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000050182	-	999	-	ENSAMXP00000039940	332 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000030715's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000030715's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000030715	-	52	32.161	ENSAMXG00000030744	-	53	33.166
ENSAMXG00000030715	-	84	79.814	ENSAMXG00000030288	-	94	79.331
ENSAMXG00000030715	-	75	30.450	ENSAMXG00000042278	-	61	32.512
ENSAMXG00000030715	-	60	40.756	ENSAMXG00000015575	-	75	40.678
ENSAMXG00000030715	-	54	32.524	ENSAMXG00000035621	-	90	32.524
ENSAMXG00000030715	-	82	32.154	ENSAMXG00000038070	-	91	36.842
ENSAMXG00000030715	-	75	34.615	ENSAMXG00000035326	-	55	37.557
ENSAMXG00000030715	-	66	35.743	ENSAMXG00000036554	-	86	35.743
ENSAMXG00000030715	-	68	33.205	ENSAMXG00000024933	-	74	34.081
ENSAMXG00000030715	-	72	58.909	ENSAMXG00000024930	-	91	58.909
ENSAMXG00000030715	-	56	35.586	ENSAMXG00000033190	-	74	36.111
ENSAMXG00000030715	-	72	33.333	ENSAMXG00000035963	-	88	33.582
ENSAMXG00000030715	-	66	30.385	ENSAMXG00000012113	-	79	30.932
ENSAMXG00000030715	-	52	36.792	ENSAMXG00000021622	-	87	36.792
ENSAMXG00000030715	-	83	37.943	ENSAMXG00000039994	-	87	35.075
ENSAMXG00000030715	-	66	54.941	ENSAMXG00000036745	-	84	51.383
ENSAMXG00000030715	-	67	33.459	ENSAMXG00000041969	si:ch1073-185p12.2	66	35.780
ENSAMXG00000030715	-	53	36.667	ENSAMXG00000039735	-	71	36.667
ENSAMXG00000030715	-	51	36.453	ENSAMXG00000035357	-	65	36.058
ENSAMXG00000030715	-	50	37.500	ENSAMXG00000038580	-	56	37.500
ENSAMXG00000030715	-	69	39.574	ENSAMXG00000032368	-	90	40.654
ENSAMXG00000030715	-	53	39.336	ENSAMXG00000006341	-	79	39.336
ENSAMXG00000030715	-	62	37.281	ENSAMXG00000043046	-	85	36.134
ENSAMXG00000030715	-	61	34.722	ENSAMXG00000019109	-	57	34.722
ENSAMXG00000030715	-	55	40.994	ENSAMXG00000030159	-	70	40.994
ENSAMXG00000030715	-	56	33.333	ENSAMXG00000030501	-	67	34.634
ENSAMXG00000030715	-	64	37.668	ENSAMXG00000010267	-	90	36.078
ENSAMXG00000030715	-	58	34.211	ENSAMXG00000040708	-	78	35.211
ENSAMXG00000030715	-	60	40.417	ENSAMXG00000035792	-	74	40.367
ENSAMXG00000030715	-	55	35.484	ENSAMXG00000038358	-	62	34.978
ENSAMXG00000030715	-	54	31.308	ENSAMXG00000043776	-	76	31.308
ENSAMXG00000030715	-	51	40.000	ENSAMXG00000032276	-	70	38.721
ENSAMXG00000030715	-	52	30.097	ENSAMXG00000032601	zgc:165583	64	30.097
ENSAMXG00000030715	-	51	30.435	ENSAMXG00000031086	-	95	30.435
ENSAMXG00000030715	-	85	35.826	ENSAMXG00000035548	-	67	35.202
ENSAMXG00000030715	-	50	37.811	ENSAMXG00000013452	-	58	37.624
ENSAMXG00000030715	-	65	37.698	ENSAMXG00000013450	-	69	33.667
ENSAMXG00000030715	-	64	37.097	ENSAMXG00000033324	-	66	37.097
ENSAMXG00000030715	-	52	35.437	ENSAMXG00000041888	-	99	35.437
ENSAMXG00000030715	-	52	39.423	ENSAMXG00000037101	zgc:113625	76	39.423
ENSAMXG00000030715	-	52	35.052	ENSAMXG00000002562	-	83	34.343
ENSAMXG00000030715	-	51	35.149	ENSAMXG00000043471	-	59	34.975
ENSAMXG00000030715	-	64	35.223	ENSAMXG00000038457	-	85	40.761
ENSAMXG00000030715	-	50	36.318	ENSAMXG00000033160	-	88	36.318
ENSAMXG00000030715	-	79	47.797	ENSAMXG00000030783	-	61	45.675
ENSAMXG00000030715	-	60	53.219	ENSAMXG00000037741	-	86	52.423
ENSAMXG00000030715	-	71	37.124	ENSAMXG00000031962	-	97	37.461
ENSAMXG00000030715	-	52	40.385	ENSAMXG00000030472	-	88	40.385
ENSAMXG00000030715	-	50	32.683	ENSAMXG00000032489	-	72	30.435
ENSAMXG00000030715	-	50	36.019	ENSAMXG00000025201	si:dkey-125e8.4	59	35.514
ENSAMXG00000030715	-	75	31.707	ENSAMXG00000032381	-	82	30.519
ENSAMXG00000030715	-	66	55.172	ENSAMXG00000030926	-	72	55.172
ENSAMXG00000030715	-	53	39.048	ENSAMXG00000029731	-	76	39.336
ENSAMXG00000030715	-	55	32.420	ENSAMXG00000042454	-	64	33.333
ENSAMXG00000030715	-	86	31.527	ENSAMXG00000021387	-	64	32.500
ENSAMXG00000030715	-	59	35.622	ENSAMXG00000032951	-	88	35.622
ENSAMXG00000030715	-	55	38.813	ENSAMXG00000007079	-	84	38.889
ENSAMXG00000030715	-	58	31.513	ENSAMXG00000006064	-	55	33.503
ENSAMXG00000030715	-	52	42.584	ENSAMXG00000037647	-	85	42.584
ENSAMXG00000030715	-	52	32.692	ENSAMXG00000040298	-	83	32.692
ENSAMXG00000030715	-	62	34.821	ENSAMXG00000041148	-	86	35.268
ENSAMXG00000030715	-	56	32.143	ENSAMXG00000041141	-	55	32.407
ENSAMXG00000030715	-	76	35.889	ENSAMXG00000038930	-	87	35.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000030715	-	63	44.444	ENSAPOG00000008987	-	52	41.534	Acanthochromis_polyacanthus
ENSAMXG00000030715	-	63	44.444	ENSAPOG00000017368	-	53	41.534	Acanthochromis_polyacanthus
ENSAMXG00000030715	-	67	37.868	ENSAPOG00000001447	-	89	36.491	Acanthochromis_polyacanthus
ENSAMXG00000030715	-	71	46.667	ENSACIG00000012718	-	90	44.651	Amphilophus_citrinellus
ENSAMXG00000030715	-	68	42.748	ENSACIG00000012648	-	86	40.559	Amphilophus_citrinellus
ENSAMXG00000030715	-	76	41.497	ENSACIG00000005198	-	57	40.426	Amphilophus_citrinellus
ENSAMXG00000030715	-	59	42.358	ENSACIG00000007191	-	81	33.861	Amphilophus_citrinellus
ENSAMXG00000030715	-	53	41.872	ENSAOCG00000002389	-	63	41.872	Amphiprion_ocellaris
ENSAMXG00000030715	-	51	45.320	ENSAOCG00000013686	-	62	45.545	Amphiprion_ocellaris
ENSAMXG00000030715	-	59	39.827	ENSAPEG00000021634	-	70	40.670	Amphiprion_percula
ENSAMXG00000030715	-	70	42.697	ENSATEG00000011735	-	80	38.941	Anabas_testudineus
ENSAMXG00000030715	-	63	42.449	ENSATEG00000011330	-	54	38.908	Anabas_testudineus
ENSAMXG00000030715	-	51	44.660	ENSACLG00000005066	-	73	44.660	Astatotilapia_calliptera
ENSAMXG00000030715	-	81	42.434	ENSACLG00000012195	-	54	42.434	Astatotilapia_calliptera
ENSAMXG00000030715	-	61	45.798	ENSACLG00000005679	-	58	41.358	Astatotilapia_calliptera
ENSAMXG00000030715	-	61	43.882	ENSACLG00000024836	-	77	44.860	Astatotilapia_calliptera
ENSAMXG00000030715	-	67	46.212	ENSACLG00000005669	-	92	46.008	Astatotilapia_calliptera
ENSAMXG00000030715	-	63	39.095	ENSACLG00000009780	-	77	35.971	Astatotilapia_calliptera
ENSAMXG00000030715	-	73	36.823	ENSACLG00000009774	-	71	36.299	Astatotilapia_calliptera
ENSAMXG00000030715	-	67	44.444	ENSACLG00000024854	-	71	47.442	Astatotilapia_calliptera
ENSAMXG00000030715	-	61	43.515	ENSACLG00000005220	-	52	42.922	Astatotilapia_calliptera
ENSAMXG00000030715	-	76	37.716	ENSACLG00000004980	-	60	37.624	Astatotilapia_calliptera
ENSAMXG00000030715	-	67	54.113	ENSELUG00000005405	-	62	57.592	Esox_lucius
ENSAMXG00000030715	-	55	44.091	ENSFHEG00000000207	-	52	40.523	Fundulus_heteroclitus
ENSAMXG00000030715	-	54	40.930	ENSGACG00000002627	-	83	40.845	Gasterosteus_aculeatus
ENSAMXG00000030715	-	58	44.690	ENSHBUG00000020633	-	50	42.123	Haplochromis_burtoni
ENSAMXG00000030715	-	78	39.355	ENSHBUG00000013269	-	52	40.067	Haplochromis_burtoni
ENSAMXG00000030715	-	55	43.318	ENSHBUG00000000157	-	79	43.318	Haplochromis_burtoni
ENSAMXG00000030715	-	66	42.688	ENSHBUG00000002999	-	91	40.072	Haplochromis_burtoni
ENSAMXG00000030715	-	81	42.434	ENSHBUG00000010247	-	54	42.434	Haplochromis_burtoni
ENSAMXG00000030715	-	60	46.414	ENSHBUG00000011156	-	83	40.753	Haplochromis_burtoni
ENSAMXG00000030715	-	64	42.857	ENSHBUG00000006928	-	79	39.437	Haplochromis_burtoni
ENSAMXG00000030715	-	63	37.190	ENSLBEG00000008506	-	87	35.831	Labrus_bergylta
ENSAMXG00000030715	-	64	41.365	ENSMAMG00000017884	-	53	38.356	Mastacembelus_armatus
ENSAMXG00000030715	-	50	42.500	ENSMAMG00000017874	-	78	42.500	Mastacembelus_armatus
ENSAMXG00000030715	-	64	38.554	ENSMAMG00000017906	-	61	34.539	Mastacembelus_armatus
ENSAMXG00000030715	-	70	38.790	ENSMAMG00000017849	-	59	38.769	Mastacembelus_armatus
ENSAMXG00000030715	-	64	42.857	ENSMAMG00000017892	-	86	42.857	Mastacembelus_armatus
ENSAMXG00000030715	-	61	43.421	ENSMZEG00005028364	-	58	39.933	Maylandia_zebra
ENSAMXG00000030715	-	71	38.007	ENSMZEG00005021732	-	78	35.484	Maylandia_zebra
ENSAMXG00000030715	-	70	40.149	ENSMZEG00005014235	-	91	38.305	Maylandia_zebra
ENSAMXG00000030715	-	52	44.498	ENSMZEG00005021721	-	77	43.925	Maylandia_zebra
ENSAMXG00000030715	-	67	44.444	ENSMZEG00005021723	-	67	47.442	Maylandia_zebra
ENSAMXG00000030715	-	67	44.776	ENSMZEG00005002051	-	90	39.116	Maylandia_zebra
ENSAMXG00000030715	-	69	45.902	ENSMZEG00005027841	-	74	45.902	Maylandia_zebra
ENSAMXG00000030715	-	59	36.087	ENSMMOG00000010425	-	83	36.744	Mola_mola
ENSAMXG00000030715	-	65	46.124	ENSNBRG00000003060	-	81	41.696	Neolamprologus_brichardi
ENSAMXG00000030715	-	56	40.000	ENSNBRG00000019143	-	78	40.094	Neolamprologus_brichardi
ENSAMXG00000030715	-	53	42.453	ENSNBRG00000002940	-	55	42.453	Neolamprologus_brichardi
ENSAMXG00000030715	-	83	34.395	ENSNBRG00000019119	-	74	40.433	Neolamprologus_brichardi
ENSAMXG00000030715	-	59	48.276	ENSNBRG00000014905	-	87	44.000	Neolamprologus_brichardi
ENSAMXG00000030715	-	65	44.490	ENSONIG00000012315	-	75	41.479	Oreochromis_niloticus
ENSAMXG00000030715	-	81	39.198	ENSONIG00000010736	-	62	39.683	Oreochromis_niloticus
ENSAMXG00000030715	-	82	42.071	ENSONIG00000011313	-	61	42.071	Oreochromis_niloticus
ENSAMXG00000030715	-	79	41.751	ENSONIG00000004482	-	99	42.804	Oreochromis_niloticus
ENSAMXG00000030715	-	63	37.743	ENSORLG00015004298	-	51	34.915	Oryzias_latipes_hsok
ENSAMXG00000030715	-	73	36.823	ENSPMGG00000002488	-	77	41.176	Periophthalmus_magnuspinnatus
ENSAMXG00000030715	-	61	44.681	ENSPFOG00000022293	-	52	40.453	Poecilia_formosa
ENSAMXG00000030715	-	62	44.681	ENSPMEG00000009705	-	82	46.535	Poecilia_mexicana
ENSAMXG00000030715	-	62	42.149	ENSPMEG00000008599	-	50	39.088	Poecilia_mexicana
ENSAMXG00000030715	-	68	39.924	ENSPREG00000006470	-	53	43.810	Poecilia_reticulata
ENSAMXG00000030715	-	70	37.956	ENSPREG00000018694	-	73	41.014	Poecilia_reticulata
ENSAMXG00000030715	-	72	38.351	ENSPNYG00000008579	-	80	37.276	Pundamilia_nyererei
ENSAMXG00000030715	-	58	47.598	ENSPNYG00000000712	-	60	41.590	Pundamilia_nyererei
ENSAMXG00000030715	-	65	46.032	ENSPNYG00000023994	-	92	41.754	Pundamilia_nyererei
ENSAMXG00000030715	-	80	40.461	ENSPNYG00000004195	-	57	40.461	Pundamilia_nyererei
ENSAMXG00000030715	-	71	46.595	ENSPNYG00000006913	-	69	44.444	Pundamilia_nyererei
ENSAMXG00000030715	-	63	46.721	ENSPNYG00000019890	-	87	41.877	Pundamilia_nyererei
ENSAMXG00000030715	-	71	45.956	ENSPNAG00000003225	-	81	45.956	Pygocentrus_nattereri
ENSAMXG00000030715	-	85	35.962	ENSSDUG00000016809	-	76	42.308	Seriola_dumerili
ENSAMXG00000030715	-	66	41.502	ENSSDUG00000016851	-	54	40.068	Seriola_dumerili
ENSAMXG00000030715	-	67	41.379	ENSSDUG00000016791	-	78	42.857	Seriola_dumerili
ENSAMXG00000030715	-	75	40.146	ENSSDUG00000016775	-	91	37.102	Seriola_dumerili
ENSAMXG00000030715	-	54	45.070	ENSSDUG00000009253	-	75	37.243	Seriola_dumerili
ENSAMXG00000030715	-	74	35.636	ENSSDUG00000016459	-	97	34.545	Seriola_dumerili
ENSAMXG00000030715	-	81	35.294	ENSSDUG00000005095	-	78	34.808	Seriola_dumerili
ENSAMXG00000030715	-	64	42.231	ENSSLDG00000004233	-	75	45.024	Seriola_lalandi_dorsalis
ENSAMXG00000030715	-	67	38.610	ENSSLDG00000002339	-	95	38.652	Seriola_lalandi_dorsalis
ENSAMXG00000030715	-	67	41.603	ENSSLDG00000001606	-	77	42.534	Seriola_lalandi_dorsalis
ENSAMXG00000030715	-	80	38.762	ENSSLDG00000007022	-	74	37.742	Seriola_lalandi_dorsalis
ENSAMXG00000030715	-	68	42.912	ENSSLDG00000004473	-	93	40.996	Seriola_lalandi_dorsalis
ENSAMXG00000030715	-	54	40.000	ENSSLDG00000013126	-	61	39.535	Seriola_lalandi_dorsalis
ENSAMXG00000030715	-	54	44.186	ENSSLDG00000011692	-	65	44.186	Seriola_lalandi_dorsalis
ENSAMXG00000030715	-	64	38.462	ENSSLDG00000001533	-	75	43.458	Seriola_lalandi_dorsalis
ENSAMXG00000030715	-	61	46.875	ENSSPAG00000005977	-	60	40.064	Stegastes_partitus
ENSAMXG00000030715	-	61	40.000	ENSSPAG00000001365	-	78	41.509	Stegastes_partitus
ENSAMXG00000030715	-	66	41.732	ENSXCOG00000018711	-	87	39.510	Xiphophorus_couchianus