EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000030719 (Gene tree)
Gene ID: 103042820
Gene Symbol: kars
Alias: cb530|wu:fa16h02|zgc:92483
Full Name: lysyl-tRNA synthetase
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 16654 bases
Position: chr5:35159815-35176468
Accession: 103042820
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000037971	tRNA_anti-codon	PF01336.25	8.1e-13	1	1
ENSAMXP00000006627	tRNA_anti-codon	PF01336.25	8.2e-13	1	1
ENSAMXP00000036190	tRNA_anti-codon	PF01336.25	8.6e-13	1	1
ENSAMXP00000037971	tRNA-synt_2	PF00152.20	3.2e-78	1	1
ENSAMXP00000006627	tRNA-synt_2	PF00152.20	3.3e-78	1	1
ENSAMXP00000036190	tRNA-synt_2	PF00152.20	3.4e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000006627	-	1749	XM_022670068	ENSAMXP00000006627	582 (aa)	XP_022525789	W5KGB5
ENSAMXT00000041517	-	3947	XM_022670067	ENSAMXP00000037971	577 (aa)	XP_022525788	UPI000BBDE0B1
ENSAMXT00000053263	-	4072	XM_022670066	ENSAMXP00000036190	601 (aa)	XP_022525787	UPI000BBD8274

Gene Model

Click here to download ENSAMXG00000030719's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000030719's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000030719	kars	98	80.279	ENSG00000065427	KARS	100	90.196	Homo_sapiens
ENSAMXG00000030719	kars	100	87.543	ENSAPOG00000010997	kars	100	87.543	Acanthochromis_polyacanthus
ENSAMXG00000030719	kars	98	79.577	ENSAMEG00000005347	KARS	97	76.606	Ailuropoda_melanoleuca
ENSAMXG00000030719	kars	100	85.813	ENSACIG00000000304	kars	100	85.813	Amphilophus_citrinellus
ENSAMXG00000030719	kars	99	88.811	ENSAOCG00000012971	kars	97	89.068	Amphiprion_ocellaris
ENSAMXG00000030719	kars	100	89.446	ENSAPEG00000011144	kars	100	89.446	Amphiprion_percula
ENSAMXG00000030719	kars	100	88.235	ENSATEG00000004954	kars	100	88.235	Anabas_testudineus
ENSAMXG00000030719	kars	93	79.926	ENSAPLG00000012705	KARS	97	80.374	Anas_platyrhynchos
ENSAMXG00000030719	kars	98	78.147	ENSACAG00000007577	KARS	96	74.795	Anolis_carolinensis
ENSAMXG00000030719	kars	99	79.862	ENSANAG00000030403	-	97	79.862	Aotus_nancymaae
ENSAMXG00000030719	kars	98	65.411	ENSANAG00000031739	-	93	66.014	Aotus_nancymaae
ENSAMXG00000030719	kars	100	91.869	ENSACLG00000001613	kars	98	91.869	Astatotilapia_calliptera
ENSAMXG00000030719	kars	98	80.172	ENSBTAG00000015677	KARS	75	80.172	Bos_taurus
ENSAMXG00000030719	kars	96	62.057	WBGene00002238	kars-1	97	65.600	Caenorhabditis_elegans
ENSAMXG00000030719	kars	99	79.387	ENSCJAG00000014213	KARS	98	79.387	Callithrix_jacchus
ENSAMXG00000030719	kars	96	81.429	ENSCAFG00000020069	KARS	96	78.297	Canis_familiaris
ENSAMXG00000030719	kars	97	81.883	ENSCAFG00020001721	KARS	94	81.883	Canis_lupus_dingo
ENSAMXG00000030719	kars	97	78.746	ENSCHIG00000016073	-	95	78.746	Capra_hircus
ENSAMXG00000030719	kars	98	80.517	ENSCHIG00000014108	-	97	80.517	Capra_hircus
ENSAMXG00000030719	kars	97	82.155	ENSTSYG00000001643	KARS	96	82.342	Carlito_syrichta
ENSAMXG00000030719	kars	98	73.730	ENSCAPG00000016234	KARS	99	72.128	Cavia_aperea
ENSAMXG00000030719	kars	99	79.829	ENSCPOG00000012036	KARS	99	79.557	Cavia_porcellus
ENSAMXG00000030719	kars	93	65.314	ENSCCAG00000030337	-	99	65.314	Cebus_capucinus
ENSAMXG00000030719	kars	99	80.034	ENSCCAG00000034307	-	97	80.034	Cebus_capucinus
ENSAMXG00000030719	kars	98	79.756	ENSCATG00000038129	KARS	96	79.123	Cercocebus_atys
ENSAMXG00000030719	kars	97	80.986	ENSCLAG00000007905	KARS	95	80.986	Chinchilla_lanigera
ENSAMXG00000030719	kars	96	79.821	ENSCSAG00000003664	KARS	90	80.000	Chlorocebus_sabaeus
ENSAMXG00000030719	kars	78	86.414	ENSCHOG00000013447	KARS	72	86.414	Choloepus_hoffmanni
ENSAMXG00000030719	kars	99	80.862	ENSCPBG00000026969	KARS	98	80.617	Chrysemys_picta_bellii
ENSAMXG00000030719	kars	92	71.482	ENSCPBG00000002553	-	96	71.482	Chrysemys_picta_bellii
ENSAMXG00000030719	kars	98	68.190	ENSCING00000009513	-	98	68.007	Ciona_intestinalis
ENSAMXG00000030719	kars	98	68.651	ENSCSAVG00000007684	-	99	68.815	Ciona_savignyi
ENSAMXG00000030719	kars	55	72.327	ENSCSAVG00000001136	-	96	75.600	Ciona_savignyi
ENSAMXG00000030719	kars	98	75.742	ENSCANG00000032813	KARS	96	75.742	Colobus_angolensis_palliatus
ENSAMXG00000030719	kars	99	80.623	ENSCGRG00001004055	KARS	97	80.623	Cricetulus_griseus_chok1gshd
ENSAMXG00000030719	kars	99	80.623	ENSCGRG00000014242	KARS	97	80.623	Cricetulus_griseus_crigri
ENSAMXG00000030719	kars	99	90.368	ENSCSEG00000008324	kars	99	90.368	Cynoglossus_semilaevis
ENSAMXG00000030719	kars	99	88.947	ENSCVAG00000019686	kars	99	88.947	Cyprinodon_variegatus
ENSAMXG00000030719	kars	100	92.215	ENSDARG00000103799	kars	100	92.215	Danio_rerio
ENSAMXG00000030719	kars	96	81.250	ENSDNOG00000002241	KARS	96	77.704	Dasypus_novemcinctus
ENSAMXG00000030719	kars	96	62.950	ENSDORG00000024214	-	96	62.950	Dipodomys_ordii
ENSAMXG00000030719	kars	99	79.828	ENSDORG00000004780	-	97	79.828	Dipodomys_ordii
ENSAMXG00000030719	kars	96	71.505	FBgn0027084	LysRS	97	71.685	Drosophila_melanogaster
ENSAMXG00000030719	kars	96	81.038	ENSETEG00000008353	KARS	89	81.216	Echinops_telfairi
ENSAMXG00000030719	kars	97	71.556	ENSEBUG00000001284	-	97	70.753	Eptatretus_burgeri
ENSAMXG00000030719	kars	98	81.469	ENSEASG00005013497	KARS	96	81.469	Equus_asinus_asinus
ENSAMXG00000030719	kars	98	81.469	ENSECAG00000013424	KARS	96	81.469	Equus_caballus
ENSAMXG00000030719	kars	96	73.882	ENSEEUG00000007042	KARS	91	73.111	Erinaceus_europaeus
ENSAMXG00000030719	kars	98	83.511	ENSELUG00000014575	kars	97	83.511	Esox_lucius
ENSAMXG00000030719	kars	98	80.628	ENSFCAG00000008573	KARS	97	79.725	Felis_catus
ENSAMXG00000030719	kars	98	79.860	ENSFALG00000002543	KARS	97	79.860	Ficedula_albicollis
ENSAMXG00000030719	kars	98	80.594	ENSFDAG00000007155	KARS	96	80.594	Fukomys_damarensis
ENSAMXG00000030719	kars	100	85.986	ENSFHEG00000006172	kars	100	85.986	Fundulus_heteroclitus
ENSAMXG00000030719	kars	98	88.380	ENSGMOG00000002633	kars	99	84.666	Gadus_morhua
ENSAMXG00000030719	kars	98	80.454	ENSGALG00000000907	KARS	99	80.351	Gallus_gallus
ENSAMXG00000030719	kars	99	88.215	ENSGAFG00000017252	kars	99	88.215	Gambusia_affinis
ENSAMXG00000030719	kars	100	86.575	ENSGACG00000015749	kars	100	84.013	Gasterosteus_aculeatus
ENSAMXG00000030719	kars	99	80.895	ENSGAGG00000023836	KARS	98	80.895	Gopherus_agassizii
ENSAMXG00000030719	kars	92	71.107	ENSGAGG00000011960	-	95	73.715	Gopherus_agassizii
ENSAMXG00000030719	kars	98	80.105	ENSGGOG00000005515	KARS	96	80.105	Gorilla_gorilla
ENSAMXG00000030719	kars	100	91.869	ENSHBUG00000013619	kars	98	91.869	Haplochromis_burtoni
ENSAMXG00000030719	kars	98	64.334	ENSHGLG00000001298	-	97	64.334	Heterocephalus_glaber_female
ENSAMXG00000030719	kars	98	80.810	ENSHGLG00000011898	KARS	97	80.859	Heterocephalus_glaber_female
ENSAMXG00000030719	kars	97	72.647	ENSHGLG00000015235	-	94	72.647	Heterocephalus_glaber_female
ENSAMXG00000030719	kars	97	72.469	ENSHGLG00100012523	-	89	78.992	Heterocephalus_glaber_male
ENSAMXG00000030719	kars	98	80.810	ENSHGLG00100012264	KARS	95	80.810	Heterocephalus_glaber_male
ENSAMXG00000030719	kars	98	64.164	ENSHGLG00100006466	-	97	64.164	Heterocephalus_glaber_male
ENSAMXG00000030719	kars	100	88.408	ENSHCOG00000002900	kars	97	88.408	Hippocampus_comes
ENSAMXG00000030719	kars	100	91.854	ENSIPUG00000009862	kars	100	91.854	Ictalurus_punctatus
ENSAMXG00000030719	kars	99	79.897	ENSSTOG00000004205	KARS	98	80.069	Ictidomys_tridecemlineatus
ENSAMXG00000030719	kars	99	80.069	ENSJJAG00000020406	Kars	98	80.069	Jaculus_jaculus
ENSAMXG00000030719	kars	99	89.529	ENSKMAG00000006434	kars	99	89.529	Kryptolebias_marmoratus
ENSAMXG00000030719	kars	100	89.965	ENSLBEG00000026537	kars	100	86.885	Labrus_bergylta
ENSAMXG00000030719	kars	98	81.961	ENSLACG00000006667	KARS	96	79.933	Latimeria_chalumnae
ENSAMXG00000030719	kars	88	75.148	ENSLACG00000016399	-	99	75.148	Latimeria_chalumnae
ENSAMXG00000030719	kars	93	69.331	ENSLOCG00000013608	-	98	69.331	Lepisosteus_oculatus
ENSAMXG00000030719	kars	100	89.637	ENSLOCG00000004002	kars	100	89.673	Lepisosteus_oculatus
ENSAMXG00000030719	kars	96	80.000	ENSLAFG00000015340	KARS	96	76.795	Loxodonta_africana
ENSAMXG00000030719	kars	98	79.581	ENSMFAG00000040024	KARS	96	79.581	Macaca_fascicularis
ENSAMXG00000030719	kars	98	79.581	ENSMNEG00000042879	-	96	79.581	Macaca_nemestrina
ENSAMXG00000030719	kars	87	77.210	ENSMNEG00000035832	-	98	77.210	Macaca_nemestrina
ENSAMXG00000030719	kars	98	79.581	ENSMLEG00000034947	KARS	96	79.581	Mandrillus_leucophaeus
ENSAMXG00000030719	kars	98	89.735	ENSMAMG00000021559	kars	100	86.557	Mastacembelus_armatus
ENSAMXG00000030719	kars	100	91.869	ENSMZEG00005014382	kars	98	91.869	Maylandia_zebra
ENSAMXG00000030719	kars	96	78.508	ENSMGAG00000009000	KARS	99	79.174	Meleagris_gallopavo
ENSAMXG00000030719	kars	100	78.788	ENSMICG00000011997	KARS	99	79.153	Microcebus_murinus
ENSAMXG00000030719	kars	98	79.196	ENSMOCG00000019029	-	96	79.196	Microtus_ochrogaster
ENSAMXG00000030719	kars	99	81.565	ENSMOCG00000011829	Kars	97	81.565	Microtus_ochrogaster
ENSAMXG00000030719	kars	98	89.165	ENSMMOG00000016934	kars	100	89.165	Mola_mola
ENSAMXG00000030719	kars	98	78.836	ENSMODG00000002215	-	98	79.012	Monodelphis_domestica
ENSAMXG00000030719	kars	97	75.758	ENSMODG00000002238	-	90	75.936	Monodelphis_domestica
ENSAMXG00000030719	kars	100	88.927	ENSMALG00000020858	kars	100	88.927	Monopterus_albus
ENSAMXG00000030719	kars	83	81.351	MGP_CAROLIEiJ_G0031588	Kars	95	81.351	Mus_caroli
ENSAMXG00000030719	kars	97	82.716	ENSMUSG00000031948	Kars	95	82.716	Mus_musculus
ENSAMXG00000030719	kars	97	81.834	MGP_PahariEiJ_G0023186	Kars	95	81.834	Mus_pahari
ENSAMXG00000030719	kars	97	82.540	MGP_SPRETEiJ_G0032706	Kars	95	82.540	Mus_spretus
ENSAMXG00000030719	kars	98	79.965	ENSMPUG00000009871	KARS	97	76.809	Mustela_putorius_furo
ENSAMXG00000030719	kars	99	79.381	ENSMLUG00000015119	-	98	79.381	Myotis_lucifugus
ENSAMXG00000030719	kars	80	53.867	ENSMLUG00000026871	-	96	53.867	Myotis_lucifugus
ENSAMXG00000030719	kars	99	80.696	ENSNGAG00000018820	-	97	80.696	Nannospalax_galili
ENSAMXG00000030719	kars	95	80.289	ENSNGAG00000022944	-	95	80.289	Nannospalax_galili
ENSAMXG00000030719	kars	100	91.696	ENSNBRG00000011098	kars	98	91.696	Neolamprologus_brichardi
ENSAMXG00000030719	kars	98	80.454	ENSNLEG00000013072	KARS	96	80.454	Nomascus_leucogenys
ENSAMXG00000030719	kars	97	77.758	ENSMEUG00000008684	KARS	98	74.338	Notamacropus_eugenii
ENSAMXG00000030719	kars	98	78.683	ENSOPRG00000012544	KARS	94	78.856	Ochotona_princeps
ENSAMXG00000030719	kars	96	57.477	ENSODEG00000009464	-	96	57.477	Octodon_degus
ENSAMXG00000030719	kars	98	81.643	ENSODEG00000013099	-	97	82.079	Octodon_degus
ENSAMXG00000030719	kars	100	91.696	ENSONIG00000005937	kars	100	91.222	Oreochromis_niloticus
ENSAMXG00000030719	kars	98	81.152	ENSOANG00000008179	KARS	99	79.223	Ornithorhynchus_anatinus
ENSAMXG00000030719	kars	99	74.138	ENSOCUG00000015553	KARS	97	74.655	Oryctolagus_cuniculus
ENSAMXG00000030719	kars	98	88.516	ENSORLG00000007627	kars	99	86.020	Oryzias_latipes
ENSAMXG00000030719	kars	98	88.163	ENSORLG00020010056	kars	99	85.855	Oryzias_latipes_hni
ENSAMXG00000030719	kars	98	88.339	ENSORLG00015008179	kars	99	86.020	Oryzias_latipes_hsok
ENSAMXG00000030719	kars	99	88.542	ENSOMEG00000001710	kars	99	88.542	Oryzias_melastigma
ENSAMXG00000030719	kars	98	74.394	ENSOGAG00000005903	KARS	99	71.637	Otolemur_garnettii
ENSAMXG00000030719	kars	91	80.863	ENSOARG00000006928	KARS	93	80.863	Ovis_aries
ENSAMXG00000030719	kars	98	79.930	ENSPPAG00000036192	KARS	96	79.930	Pan_paniscus
ENSAMXG00000030719	kars	98	80.454	ENSPPRG00000003027	KARS	96	80.454	Panthera_pardus
ENSAMXG00000030719	kars	98	80.628	ENSPTIG00000008011	KARS	96	80.628	Panthera_tigris_altaica
ENSAMXG00000030719	kars	98	80.105	ENSPTRG00000008364	KARS	96	80.105	Pan_troglodytes
ENSAMXG00000030719	kars	98	79.756	ENSPANG00000024106	KARS	90	80.179	Papio_anubis
ENSAMXG00000030719	kars	100	89.810	ENSPKIG00000009896	kars	100	89.810	Paramormyrops_kingsleyae
ENSAMXG00000030719	kars	90	74.952	ENSPSIG00000003041	-	95	74.952	Pelodiscus_sinensis
ENSAMXG00000030719	kars	97	80.893	ENSPSIG00000009294	KARS	96	81.429	Pelodiscus_sinensis
ENSAMXG00000030719	kars	97	90.036	ENSPMGG00000006117	kars	100	90.036	Periophthalmus_magnuspinnatus
ENSAMXG00000030719	kars	99	80.729	ENSPEMG00000012277	Kars	97	80.729	Peromyscus_maniculatus_bairdii
ENSAMXG00000030719	kars	97	73.890	ENSPMAG00000008360	-	91	74.245	Petromyzon_marinus
ENSAMXG00000030719	kars	98	80.634	ENSPCIG00000010761	-	96	79.720	Phascolarctos_cinereus
ENSAMXG00000030719	kars	98	77.482	ENSPCIG00000025469	-	98	73.432	Phascolarctos_cinereus
ENSAMXG00000030719	kars	98	88.298	ENSPFOG00000013253	kars	99	85.222	Poecilia_formosa
ENSAMXG00000030719	kars	99	88.215	ENSPLAG00000004189	kars	99	88.215	Poecilia_latipinna
ENSAMXG00000030719	kars	99	88.042	ENSPMEG00000015698	kars	99	88.042	Poecilia_mexicana
ENSAMXG00000030719	kars	99	88.215	ENSPREG00000023179	kars	99	88.215	Poecilia_reticulata
ENSAMXG00000030719	kars	96	80.179	ENSPPYG00000007567	KARS	96	76.539	Pongo_abelii
ENSAMXG00000030719	kars	88	75.446	ENSPCAG00000010790	KARS	97	75.446	Procavia_capensis
ENSAMXG00000030719	kars	99	72.867	ENSPCOG00000003166	KARS	99	72.867	Propithecus_coquereli
ENSAMXG00000030719	kars	96	81.250	ENSPVAG00000006746	KARS	96	78.261	Pteropus_vampyrus
ENSAMXG00000030719	kars	100	91.869	ENSPNYG00000013095	kars	98	91.869	Pundamilia_nyererei
ENSAMXG00000030719	kars	100	93.588	ENSPNAG00000013828	kars	100	93.588	Pygocentrus_nattereri
ENSAMXG00000030719	kars	98	80.668	ENSRNOG00000019456	Kars	97	77.668	Rattus_norvegicus
ENSAMXG00000030719	kars	98	79.232	ENSRBIG00000030118	KARS	96	78.596	Rhinopithecus_bieti
ENSAMXG00000030719	kars	96	79.501	ENSRROG00000041418	KARS	96	78.596	Rhinopithecus_roxellana
ENSAMXG00000030719	kars	78	33.264	YNL073W	-	82	33.264	Saccharomyces_cerevisiae
ENSAMXG00000030719	kars	97	57.624	YDR037W	KRS1	94	57.447	Saccharomyces_cerevisiae
ENSAMXG00000030719	kars	98	80.454	ENSSBOG00000019255	KARS	97	80.969	Saimiri_boliviensis_boliviensis
ENSAMXG00000030719	kars	97	66.726	ENSSHAG00000002050	-	97	63.531	Sarcophilus_harrisii
ENSAMXG00000030719	kars	92	70.974	ENSSHAG00000009005	-	95	70.974	Sarcophilus_harrisii
ENSAMXG00000030719	kars	98	74.825	ENSSHAG00000001359	-	98	75.000	Sarcophilus_harrisii
ENSAMXG00000030719	kars	97	89.964	ENSSFOG00015014837	kars	100	89.964	Scleropages_formosus
ENSAMXG00000030719	kars	100	89.446	ENSSMAG00000021441	kars	100	89.446	Scophthalmus_maximus
ENSAMXG00000030719	kars	100	90.830	ENSSDUG00000001202	kars	100	90.830	Seriola_dumerili
ENSAMXG00000030719	kars	98	90.603	ENSSLDG00000021220	kars	98	90.780	Seriola_lalandi_dorsalis
ENSAMXG00000030719	kars	77	81.148	ENSSARG00000011493	KARS	79	81.148	Sorex_araneus
ENSAMXG00000030719	kars	98	81.034	ENSSPUG00000004974	KARS	97	81.034	Sphenodon_punctatus
ENSAMXG00000030719	kars	65	65.867	ENSSPUG00000000449	-	86	65.867	Sphenodon_punctatus
ENSAMXG00000030719	kars	98	90.231	ENSSPAG00000020365	kars	97	90.231	Stegastes_partitus
ENSAMXG00000030719	kars	99	80.069	ENSSSCG00000002704	KARS	98	79.795	Sus_scrofa
ENSAMXG00000030719	kars	97	79.821	ENSTGUG00000008400	KARS	100	79.821	Taeniopygia_guttata
ENSAMXG00000030719	kars	98	84.779	ENSTRUG00000017551	kars	100	82.043	Takifugu_rubripes
ENSAMXG00000030719	kars	98	85.714	ENSTNIG00000009351	kars	97	85.993	Tetraodon_nigroviridis
ENSAMXG00000030719	kars	98	61.979	ENSTBEG00000004610	KARS	100	61.979	Tupaia_belangeri
ENSAMXG00000030719	kars	98	79.066	ENSTTRG00000001221	KARS	90	80.893	Tursiops_truncatus
ENSAMXG00000030719	kars	99	79.346	ENSUAMG00000017557	KARS	97	79.346	Ursus_americanus
ENSAMXG00000030719	kars	98	79.577	ENSUMAG00000014559	KARS	97	76.606	Ursus_maritimus
ENSAMXG00000030719	kars	96	78.929	ENSVPAG00000003716	KARS	89	79.107	Vicugna_pacos
ENSAMXG00000030719	kars	97	81.528	ENSVVUG00000024338	KARS	97	81.603	Vulpes_vulpes
ENSAMXG00000030719	kars	98	79.196	ENSXETG00000003569	kars	98	79.196	Xenopus_tropicalis
ENSAMXG00000030719	kars	97	88.730	ENSXCOG00000011313	kars	99	88.730	Xiphophorus_couchianus
ENSAMXG00000030719	kars	99	88.215	ENSXMAG00000003191	kars	99	88.215	Xiphophorus_maculatus