EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000030736 (Gene tree)
Gene ID: 103040497
Gene Symbol: dbr1
Alias: wu:fc08f08|zgc:63930
Full Name: debranching RNA lariats 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 7771 bases
Position: chr19:27436759-27444529
Accession: 103040497
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000029126	DBR1	PF05011.13	2e-33	1	1
ENSAMXP00000035234	DBR1	PF05011.13	2e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000038819	-	2669	-	ENSAMXP00000035234	570 (aa)	-	UPI000BBD9084
ENSAMXT00000054171	-	2066	XM_022680491	ENSAMXP00000029126	570 (aa)	XP_022536212	UPI000BBD9084

Gene Model

Click here to download ENSAMXG00000030736's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000030736's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000030736	dbr1	98	55.062	ENSG00000138231	DBR1	94	80.180	Homo_sapiens
ENSAMXG00000030736	dbr1	99	69.416	ENSAPOG00000004318	dbr1	99	69.416	Acanthochromis_polyacanthus
ENSAMXG00000030736	dbr1	98	55.674	ENSAMEG00000006272	DBR1	99	55.166	Ailuropoda_melanoleuca
ENSAMXG00000030736	dbr1	99	68.531	ENSACIG00000020512	dbr1	99	68.357	Amphilophus_citrinellus
ENSAMXG00000030736	dbr1	99	69.324	ENSAOCG00000008060	dbr1	99	69.324	Amphiprion_ocellaris
ENSAMXG00000030736	dbr1	99	69.497	ENSAPEG00000021944	dbr1	99	69.497	Amphiprion_percula
ENSAMXG00000030736	dbr1	99	70.157	ENSATEG00000019673	dbr1	99	70.629	Anabas_testudineus
ENSAMXG00000030736	dbr1	99	55.709	ENSACAG00000016760	DBR1	99	55.536	Anolis_carolinensis
ENSAMXG00000030736	dbr1	98	56.429	ENSANAG00000028952	DBR1	99	54.124	Aotus_nancymaae
ENSAMXG00000030736	dbr1	99	69.164	ENSACLG00000024027	dbr1	99	69.164	Astatotilapia_calliptera
ENSAMXG00000030736	dbr1	99	55.245	ENSBTAG00000019949	DBR1	99	54.895	Bos_taurus
ENSAMXG00000030736	dbr1	67	46.096	WBGene00000937	dbr-1	79	46.096	Caenorhabditis_elegans
ENSAMXG00000030736	dbr1	98	56.128	ENSCJAG00000002433	DBR1	99	55.692	Callithrix_jacchus
ENSAMXG00000030736	dbr1	98	56.890	ENSCAFG00000007501	DBR1	99	56.545	Canis_familiaris
ENSAMXG00000030736	dbr1	98	56.890	ENSCAFG00020008060	DBR1	99	56.545	Canis_lupus_dingo
ENSAMXG00000030736	dbr1	99	55.245	ENSCHIG00000026937	DBR1	99	54.895	Capra_hircus
ENSAMXG00000030736	dbr1	99	55.342	ENSTSYG00000005317	DBR1	99	55.342	Carlito_syrichta
ENSAMXG00000030736	dbr1	98	53.968	ENSCPOG00000006179	DBR1	99	53.833	Cavia_porcellus
ENSAMXG00000030736	dbr1	98	57.092	ENSCCAG00000025708	DBR1	99	54.828	Cebus_capucinus
ENSAMXG00000030736	dbr1	98	55.714	ENSCATG00000032054	DBR1	99	53.436	Cercocebus_atys
ENSAMXG00000030736	dbr1	98	56.261	ENSCLAG00000001800	DBR1	99	54.905	Chinchilla_lanigera
ENSAMXG00000030736	dbr1	98	55.357	ENSCSAG00000010977	DBR1	99	53.608	Chlorocebus_sabaeus
ENSAMXG00000030736	dbr1	89	66.667	ENSCHOG00000000730	DBR1	89	66.667	Choloepus_hoffmanni
ENSAMXG00000030736	dbr1	99	55.923	ENSCPBG00000007633	DBR1	90	55.420	Chrysemys_picta_bellii
ENSAMXG00000030736	dbr1	78	52.889	ENSCING00000011388	-	87	58.947	Ciona_intestinalis
ENSAMXG00000030736	dbr1	66	58.730	ENSCSAVG00000007545	-	100	58.730	Ciona_savignyi
ENSAMXG00000030736	dbr1	99	55.575	ENSCANG00000024237	DBR1	99	53.436	Colobus_angolensis_palliatus
ENSAMXG00000030736	dbr1	99	54.844	ENSCGRG00001018497	Dbr1	99	52.308	Cricetulus_griseus_chok1gshd
ENSAMXG00000030736	dbr1	100	47.782	ENSCGRG00000005958	Dbr1	99	47.782	Cricetulus_griseus_crigri
ENSAMXG00000030736	dbr1	99	65.862	ENSCSEG00000002813	dbr1	99	66.034	Cynoglossus_semilaevis
ENSAMXG00000030736	dbr1	99	65.565	ENSCVAG00000019969	dbr1	99	65.799	Cyprinodon_variegatus
ENSAMXG00000030736	dbr1	99	75.567	ENSDARG00000056923	dbr1	99	76.307	Danio_rerio
ENSAMXG00000030736	dbr1	98	56.206	ENSDNOG00000043630	DBR1	99	55.497	Dasypus_novemcinctus
ENSAMXG00000030736	dbr1	72	50.766	FBgn0035838	ldbr	85	50.985	Drosophila_melanogaster
ENSAMXG00000030736	dbr1	57	82.836	ENSETEG00000011830	DBR1	79	82.836	Echinops_telfairi
ENSAMXG00000030736	dbr1	99	45.145	ENSEBUG00000007494	dbr1	99	45.424	Eptatretus_burgeri
ENSAMXG00000030736	dbr1	98	56.738	ENSEASG00005003788	DBR1	99	56.392	Equus_asinus_asinus
ENSAMXG00000030736	dbr1	98	56.915	ENSECAG00000013920	DBR1	99	56.567	Equus_caballus
ENSAMXG00000030736	dbr1	99	48.246	ENSEEUG00000007059	DBR1	99	48.246	Erinaceus_europaeus
ENSAMXG00000030736	dbr1	99	72.775	ENSELUG00000005587	dbr1	99	73.693	Esox_lucius
ENSAMXG00000030736	dbr1	98	56.460	ENSFCAG00000002229	DBR1	99	56.469	Felis_catus
ENSAMXG00000030736	dbr1	100	55.766	ENSFALG00000013467	DBR1	86	55.993	Ficedula_albicollis
ENSAMXG00000030736	dbr1	98	54.816	ENSFDAG00000009524	DBR1	99	55.250	Fukomys_damarensis
ENSAMXG00000030736	dbr1	99	66.841	ENSFHEG00000001743	dbr1	99	67.714	Fundulus_heteroclitus
ENSAMXG00000030736	dbr1	99	66.550	ENSGMOG00000006925	dbr1	100	66.550	Gadus_morhua
ENSAMXG00000030736	dbr1	100	50.173	ENSGALG00000043797	DBR1	99	49.654	Gallus_gallus
ENSAMXG00000030736	dbr1	99	67.247	ENSGAFG00000001046	dbr1	99	66.958	Gambusia_affinis
ENSAMXG00000030736	dbr1	99	67.530	ENSGACG00000009122	dbr1	100	67.876	Gasterosteus_aculeatus
ENSAMXG00000030736	dbr1	99	56.000	ENSGAGG00000001244	DBR1	100	55.614	Gopherus_agassizii
ENSAMXG00000030736	dbr1	98	50.436	ENSGGOG00000004564	DBR1	99	49.398	Gorilla_gorilla
ENSAMXG00000030736	dbr1	99	69.164	ENSHBUG00000000882	dbr1	99	69.164	Haplochromis_burtoni
ENSAMXG00000030736	dbr1	98	56.637	ENSHGLG00000014529	Dbr1	99	56.174	Heterocephalus_glaber_female
ENSAMXG00000030736	dbr1	98	56.637	ENSHGLG00100013202	Dbr1	99	56.174	Heterocephalus_glaber_male
ENSAMXG00000030736	dbr1	99	65.385	ENSHCOG00000004179	dbr1	99	65.385	Hippocampus_comes
ENSAMXG00000030736	dbr1	99	78.374	ENSIPUG00000023749	dbr1	99	78.547	Ictalurus_punctatus
ENSAMXG00000030736	dbr1	99	55.106	ENSSTOG00000007122	DBR1	99	54.530	Ictidomys_tridecemlineatus
ENSAMXG00000030736	dbr1	99	55.497	ENSJJAG00000017080	Dbr1	99	54.878	Jaculus_jaculus
ENSAMXG00000030736	dbr1	99	64.851	ENSKMAG00000004869	dbr1	99	65.499	Kryptolebias_marmoratus
ENSAMXG00000030736	dbr1	99	68.158	ENSLBEG00000021307	dbr1	99	69.603	Labrus_bergylta
ENSAMXG00000030736	dbr1	99	60.105	ENSLACG00000005547	DBR1	100	60.105	Latimeria_chalumnae
ENSAMXG00000030736	dbr1	99	68.254	ENSLOCG00000004160	dbr1	99	68.717	Lepisosteus_oculatus
ENSAMXG00000030736	dbr1	99	55.342	ENSLAFG00000005827	DBR1	99	55.166	Loxodonta_africana
ENSAMXG00000030736	dbr1	76	63.761	ENSMFAG00000043642	DBR1	99	53.265	Macaca_fascicularis
ENSAMXG00000030736	dbr1	76	63.761	ENSMMUG00000021284	DBR1	99	53.265	Macaca_mulatta
ENSAMXG00000030736	dbr1	76	63.761	ENSMNEG00000041740	DBR1	99	53.265	Macaca_nemestrina
ENSAMXG00000030736	dbr1	88	44.910	ENSMLEG00000034542	DBR1	95	42.830	Mandrillus_leucophaeus
ENSAMXG00000030736	dbr1	99	71.404	ENSMAMG00000012205	dbr1	99	71.404	Mastacembelus_armatus
ENSAMXG00000030736	dbr1	99	69.164	ENSMZEG00005021338	dbr1	99	69.164	Maylandia_zebra
ENSAMXG00000030736	dbr1	81	51.496	ENSMGAG00000002142	DBR1	99	50.106	Meleagris_gallopavo
ENSAMXG00000030736	dbr1	99	54.974	ENSMAUG00000010037	Dbr1	99	54.799	Mesocricetus_auratus
ENSAMXG00000030736	dbr1	98	55.674	ENSMICG00000049533	DBR1	99	55.420	Microcebus_murinus
ENSAMXG00000030736	dbr1	99	54.912	ENSMOCG00000018746	Dbr1	99	54.657	Microtus_ochrogaster
ENSAMXG00000030736	dbr1	99	67.414	ENSMMOG00000000719	dbr1	99	66.321	Mola_mola
ENSAMXG00000030736	dbr1	99	56.174	ENSMODG00000018554	DBR1	99	56.174	Monodelphis_domestica
ENSAMXG00000030736	dbr1	99	67.938	ENSMALG00000022283	dbr1	97	67.938	Monopterus_albus
ENSAMXG00000030736	dbr1	98	54.401	MGP_CAROLIEiJ_G0032564	Dbr1	93	71.429	Mus_caroli
ENSAMXG00000030736	dbr1	100	55.304	ENSMUSG00000032469	Dbr1	93	71.429	Mus_musculus
ENSAMXG00000030736	dbr1	99	54.957	MGP_PahariEiJ_G0015433	Dbr1	93	71.429	Mus_pahari
ENSAMXG00000030736	dbr1	99	56.140	MGP_SPRETEiJ_G0033708	Dbr1	93	71.429	Mus_spretus
ENSAMXG00000030736	dbr1	98	55.732	ENSMPUG00000009230	DBR1	99	55.401	Mustela_putorius_furo
ENSAMXG00000030736	dbr1	98	55.923	ENSMLUG00000026117	DBR1	99	54.467	Myotis_lucifugus
ENSAMXG00000030736	dbr1	99	54.912	ENSNGAG00000003518	Dbr1	99	54.657	Nannospalax_galili
ENSAMXG00000030736	dbr1	99	69.002	ENSNBRG00000016318	dbr1	99	69.002	Neolamprologus_brichardi
ENSAMXG00000030736	dbr1	99	54.261	ENSNLEG00000032263	DBR1	98	53.184	Nomascus_leucogenys
ENSAMXG00000030736	dbr1	99	56.000	ENSMEUG00000009188	DBR1	99	54.939	Notamacropus_eugenii
ENSAMXG00000030736	dbr1	93	50.752	ENSOPRG00000016510	DBR1	99	49.721	Ochotona_princeps
ENSAMXG00000030736	dbr1	99	55.692	ENSODEG00000018178	DBR1	99	54.231	Octodon_degus
ENSAMXG00000030736	dbr1	99	68.815	ENSONIG00000013801	dbr1	99	68.815	Oreochromis_niloticus
ENSAMXG00000030736	dbr1	89	53.620	ENSOANG00000007783	DBR1	99	53.620	Ornithorhynchus_anatinus
ENSAMXG00000030736	dbr1	93	55.307	ENSOCUG00000015129	DBR1	89	53.345	Oryctolagus_cuniculus
ENSAMXG00000030736	dbr1	99	66.549	ENSORLG00015001112	dbr1	99	67.077	Oryzias_latipes_hsok
ENSAMXG00000030736	dbr1	99	67.606	ENSOMEG00000000857	dbr1	99	67.254	Oryzias_melastigma
ENSAMXG00000030736	dbr1	98	56.071	ENSOGAG00000033095	DBR1	99	55.692	Otolemur_garnettii
ENSAMXG00000030736	dbr1	99	54.196	ENSOARG00000007589	DBR1	99	53.846	Ovis_aries
ENSAMXG00000030736	dbr1	98	54.450	ENSPPAG00000031137	DBR1	99	53.356	Pan_paniscus
ENSAMXG00000030736	dbr1	98	56.460	ENSPPRG00000013629	DBR1	99	56.469	Panthera_pardus
ENSAMXG00000030736	dbr1	96	55.435	ENSPTIG00000012674	DBR1	97	55.893	Panthera_tigris_altaica
ENSAMXG00000030736	dbr1	98	54.625	ENSPTRG00000015441	DBR1	99	53.528	Pan_troglodytes
ENSAMXG00000030736	dbr1	98	55.714	ENSPANG00000012664	DBR1	99	53.436	Papio_anubis
ENSAMXG00000030736	dbr1	100	70.761	ENSPKIG00000000310	dbr1	100	70.517	Paramormyrops_kingsleyae
ENSAMXG00000030736	dbr1	88	53.861	ENSPSIG00000015486	DBR1	99	53.953	Pelodiscus_sinensis
ENSAMXG00000030736	dbr1	98	54.145	ENSPEMG00000020602	Dbr1	98	53.739	Peromyscus_maniculatus_bairdii
ENSAMXG00000030736	dbr1	66	62.434	ENSPMAG00000008620	dbr1	99	62.434	Petromyzon_marinus
ENSAMXG00000030736	dbr1	99	56.272	ENSPCIG00000006494	DBR1	99	56.272	Phascolarctos_cinereus
ENSAMXG00000030736	dbr1	99	67.308	ENSPLAG00000011665	dbr1	99	67.308	Poecilia_latipinna
ENSAMXG00000030736	dbr1	71	57.002	ENSPLAG00000002421	-	99	57.248	Poecilia_latipinna
ENSAMXG00000030736	dbr1	99	67.596	ENSPMEG00000010080	dbr1	99	67.422	Poecilia_mexicana
ENSAMXG00000030736	dbr1	72	57.554	ENSPMEG00000020884	-	94	57.314	Poecilia_mexicana
ENSAMXG00000030736	dbr1	99	68.246	ENSPREG00000020157	dbr1	99	68.070	Poecilia_reticulata
ENSAMXG00000030736	dbr1	99	54.609	ENSPPYG00000014139	DBR1	99	53.528	Pongo_abelii
ENSAMXG00000030736	dbr1	66	67.546	ENSPCAG00000012956	DBR1	97	67.546	Procavia_capensis
ENSAMXG00000030736	dbr1	98	55.851	ENSPCOG00000016894	DBR1	99	55.594	Propithecus_coquereli
ENSAMXG00000030736	dbr1	98	48.936	ENSPVAG00000007713	DBR1	99	48.687	Pteropus_vampyrus
ENSAMXG00000030736	dbr1	99	68.815	ENSPNYG00000015453	dbr1	99	68.815	Pundamilia_nyererei
ENSAMXG00000030736	dbr1	99	83.831	ENSPNAG00000025595	dbr1	99	84.534	Pygocentrus_nattereri
ENSAMXG00000030736	dbr1	99	52.821	ENSRNOG00000014588	Dbr1	99	52.821	Rattus_norvegicus
ENSAMXG00000030736	dbr1	98	54.450	ENSRBIG00000045002	DBR1	99	54.389	Rhinopithecus_bieti
ENSAMXG00000030736	dbr1	98	55.773	ENSRROG00000044819	DBR1	99	53.528	Rhinopithecus_roxellana
ENSAMXG00000030736	dbr1	52	38.202	YKL149C	DBR1	87	38.202	Saccharomyces_cerevisiae
ENSAMXG00000030736	dbr1	98	56.383	ENSSBOG00000032048	DBR1	99	54.783	Saimiri_boliviensis_boliviensis
ENSAMXG00000030736	dbr1	99	56.348	ENSSHAG00000006752	DBR1	99	56.174	Sarcophilus_harrisii
ENSAMXG00000030736	dbr1	100	69.349	ENSSFOG00015011410	dbr1	99	69.692	Scleropages_formosus
ENSAMXG00000030736	dbr1	99	69.123	ENSSMAG00000016078	dbr1	99	68.596	Scophthalmus_maximus
ENSAMXG00000030736	dbr1	99	69.744	ENSSDUG00000017849	dbr1	99	70.639	Seriola_dumerili
ENSAMXG00000030736	dbr1	99	70.326	ENSSLDG00000019891	dbr1	99	69.655	Seriola_lalandi_dorsalis
ENSAMXG00000030736	dbr1	54	66.667	ENSSARG00000003148	-	74	66.667	Sorex_araneus
ENSAMXG00000030736	dbr1	77	58.784	ENSSARG00000009558	-	80	59.132	Sorex_araneus
ENSAMXG00000030736	dbr1	93	51.224	ENSSPUG00000004724	DBR1	96	51.601	Sphenodon_punctatus
ENSAMXG00000030736	dbr1	99	68.804	ENSSPAG00000016892	dbr1	99	70.191	Stegastes_partitus
ENSAMXG00000030736	dbr1	99	55.304	ENSSSCG00000031098	DBR1	99	55.130	Sus_scrofa
ENSAMXG00000030736	dbr1	96	54.399	ENSTGUG00000007073	DBR1	99	54.219	Taeniopygia_guttata
ENSAMXG00000030736	dbr1	99	65.739	ENSTRUG00000021594	dbr1	98	65.965	Takifugu_rubripes
ENSAMXG00000030736	dbr1	86	71.486	ENSTNIG00000006710	dbr1	99	65.499	Tetraodon_nigroviridis
ENSAMXG00000030736	dbr1	99	55.944	ENSTTRG00000004020	DBR1	99	54.296	Tursiops_truncatus
ENSAMXG00000030736	dbr1	99	55.401	ENSUAMG00000004639	DBR1	99	55.401	Ursus_americanus
ENSAMXG00000030736	dbr1	98	55.379	ENSUMAG00000015012	DBR1	99	55.052	Ursus_maritimus
ENSAMXG00000030736	dbr1	99	52.448	ENSVPAG00000011711	DBR1	99	52.797	Vicugna_pacos
ENSAMXG00000030736	dbr1	98	56.514	ENSVVUG00000026604	DBR1	99	56.174	Vulpes_vulpes
ENSAMXG00000030736	dbr1	99	58.494	ENSXETG00000027491	dbr1	100	56.401	Xenopus_tropicalis
ENSAMXG00000030736	dbr1	99	68.357	ENSXCOG00000018078	dbr1	99	68.182	Xiphophorus_couchianus
ENSAMXG00000030736	dbr1	99	67.832	ENSXMAG00000007311	dbr1	99	67.657	Xiphophorus_maculatus