EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000030902 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 6353 bases
Position: chr17:19249675-19256027
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000030715	RVT_1	PF00078.27	1.7e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000043451	-	6353	-	ENSAMXP00000030715	1460 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000030902's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000030902's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000030902	-	53	39.210	ENSAMXG00000032559	-	70	39.210
ENSAMXG00000030902	-	58	37.383	ENSAMXG00000030987	-	56	37.995
ENSAMXG00000030902	-	77	47.742	ENSAMXG00000041112	-	99	47.742
ENSAMXG00000030902	-	57	38.379	ENSAMXG00000038169	-	63	38.644
ENSAMXG00000030902	-	52	60.447	ENSAMXG00000043892	-	96	60.677
ENSAMXG00000030902	-	52	37.982	ENSAMXG00000029230	-	51	37.982
ENSAMXG00000030902	-	99	52.559	ENSAMXG00000031698	-	92	52.559
ENSAMXG00000030902	-	86	53.485	ENSAMXG00000038578	-	91	53.485
ENSAMXG00000030902	-	93	52.230	ENSAMXG00000040892	-	85	52.518

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000030902	-	54	30.854	ENSAPOG00000013817	-	99	30.854	Acanthochromis_polyacanthus
ENSAMXG00000030902	-	54	30.816	ENSAPOG00000013711	-	92	30.816	Acanthochromis_polyacanthus
ENSAMXG00000030902	-	55	40.590	ENSAPOG00000008045	-	81	40.590	Acanthochromis_polyacanthus
ENSAMXG00000030902	-	73	36.789	ENSAPOG00000012135	-	88	36.712	Acanthochromis_polyacanthus
ENSAMXG00000030902	-	99	52.426	ENSACLG00000000499	-	91	52.455	Astatotilapia_calliptera
ENSAMXG00000030902	-	96	31.994	ENSACLG00000025719	-	89	31.994	Astatotilapia_calliptera
ENSAMXG00000030902	-	96	31.856	ENSACLG00000024091	-	89	31.856	Astatotilapia_calliptera
ENSAMXG00000030902	-	68	39.664	ENSACLG00000019876	-	66	40.130	Astatotilapia_calliptera
ENSAMXG00000030902	-	100	43.628	ENSACLG00000002180	-	92	44.003	Astatotilapia_calliptera
ENSAMXG00000030902	-	99	49.505	ENSACLG00000013572	-	92	49.505	Astatotilapia_calliptera
ENSAMXG00000030902	-	96	32.064	ENSACLG00000009628	-	89	32.064	Astatotilapia_calliptera
ENSAMXG00000030902	-	56	61.725	ENSACLG00000018181	-	86	61.725	Astatotilapia_calliptera
ENSAMXG00000030902	-	94	33.404	ENSACLG00000017161	-	88	33.404	Astatotilapia_calliptera
ENSAMXG00000030902	-	97	58.258	ENSACLG00000018060	-	90	58.258	Astatotilapia_calliptera
ENSAMXG00000030902	-	99	52.628	ENSACLG00000014870	-	91	52.656	Astatotilapia_calliptera
ENSAMXG00000030902	-	60	38.438	ENSACLG00000010042	-	70	38.438	Astatotilapia_calliptera
ENSAMXG00000030902	-	52	40.260	ENSACLG00000027730	-	67	40.260	Astatotilapia_calliptera
ENSAMXG00000030902	-	67	33.333	ENSACLG00000001563	-	91	33.333	Astatotilapia_calliptera
ENSAMXG00000030902	-	99	54.284	ENSACLG00000027291	-	92	54.027	Astatotilapia_calliptera
ENSAMXG00000030902	-	68	40.130	ENSACLG00000014619	-	67	40.130	Astatotilapia_calliptera
ENSAMXG00000030902	-	99	52.628	ENSACLG00000017808	-	91	52.656	Astatotilapia_calliptera
ENSAMXG00000030902	-	88	32.772	ENSACLG00000026879	-	82	32.772	Astatotilapia_calliptera
ENSAMXG00000030902	-	52	38.462	ENSCPBG00000011626	-	89	38.462	Chrysemys_picta_bellii
ENSAMXG00000030902	-	70	55.965	ENSELUG00000000948	-	88	55.094	Esox_lucius
ENSAMXG00000030902	-	60	36.558	ENSGAGG00000014450	-	77	36.558	Gopherus_agassizii
ENSAMXG00000030902	-	55	38.634	ENSGAGG00000025282	-	93	33.510	Gopherus_agassizii
ENSAMXG00000030902	-	92	30.618	ENSGAGG00000022240	-	86	30.996	Gopherus_agassizii
ENSAMXG00000030902	-	51	37.633	ENSIPUG00000000601	-	79	37.633	Ictalurus_punctatus
ENSAMXG00000030902	-	68	53.771	ENSMAMG00000018393	-	91	53.771	Mastacembelus_armatus
ENSAMXG00000030902	-	59	41.048	ENSMAMG00000012310	-	99	41.048	Mastacembelus_armatus
ENSAMXG00000030902	-	66	58.135	ENSMZEG00005000633	-	88	58.101	Maylandia_zebra
ENSAMXG00000030902	-	57	58.484	ENSORLG00000026676	-	85	58.484	Oryzias_latipes
ENSAMXG00000030902	-	88	34.021	ENSORLG00000025739	-	80	34.021	Oryzias_latipes
ENSAMXG00000030902	-	88	33.945	ENSORLG00000027568	-	80	33.945	Oryzias_latipes
ENSAMXG00000030902	-	87	34.873	ENSORLG00000030542	-	86	34.104	Oryzias_latipes
ENSAMXG00000030902	-	95	32.467	ENSORLG00000026546	-	88	32.467	Oryzias_latipes
ENSAMXG00000030902	-	95	32.326	ENSORLG00000026665	-	88	32.396	Oryzias_latipes
ENSAMXG00000030902	-	67	54.234	ENSORLG00000028632	-	90	54.234	Oryzias_latipes
ENSAMXG00000030902	-	87	34.796	ENSORLG00000022369	-	91	34.032	Oryzias_latipes
ENSAMXG00000030902	-	88	31.863	ENSORLG00000027831	-	83	31.863	Oryzias_latipes
ENSAMXG00000030902	-	99	49.467	ENSORLG00000026873	-	92	49.467	Oryzias_latipes
ENSAMXG00000030902	-	99	49.266	ENSORLG00000026629	-	92	49.266	Oryzias_latipes
ENSAMXG00000030902	-	88	33.688	ENSORLG00000024220	-	80	33.688	Oryzias_latipes
ENSAMXG00000030902	-	90	31.665	ENSORLG00000024904	-	84	31.665	Oryzias_latipes
ENSAMXG00000030902	-	87	34.642	ENSORLG00000028795	-	86	33.887	Oryzias_latipes
ENSAMXG00000030902	-	99	50.166	ENSORLG00000029874	-	92	50.299	Oryzias_latipes
ENSAMXG00000030902	-	88	34.021	ENSORLG00000030265	-	80	34.021	Oryzias_latipes
ENSAMXG00000030902	-	87	34.719	ENSORLG00000028609	-	86	33.960	Oryzias_latipes
ENSAMXG00000030902	-	95	32.444	ENSORLG00000024233	-	88	32.444	Oryzias_latipes
ENSAMXG00000030902	-	100	50.467	ENSORLG00000029675	-	92	50.601	Oryzias_latipes
ENSAMXG00000030902	-	99	49.533	ENSORLG00000023181	-	92	49.533	Oryzias_latipes
ENSAMXG00000030902	-	90	31.665	ENSORLG00020014203	-	83	31.595	Oryzias_latipes_hni
ENSAMXG00000030902	-	88	34.257	ENSORLG00020001422	-	86	33.454	Oryzias_latipes_hni
ENSAMXG00000030902	-	90	31.665	ENSORLG00020003869	-	83	31.595	Oryzias_latipes_hni
ENSAMXG00000030902	-	88	34.021	ENSORLG00020008293	-	80	34.021	Oryzias_latipes_hni
ENSAMXG00000030902	-	90	31.665	ENSORLG00020020268	-	84	31.595	Oryzias_latipes_hni
ENSAMXG00000030902	-	87	34.796	ENSORLG00015018878	-	86	34.032	Oryzias_latipes_hsok
ENSAMXG00000030902	-	87	34.796	ENSORLG00015017778	-	86	34.032	Oryzias_latipes_hsok
ENSAMXG00000030902	-	92	52.620	ENSOMEG00000009987	-	86	52.620	Oryzias_melastigma
ENSAMXG00000030902	-	87	34.981	ENSOMEG00000003712	-	90	33.820	Oryzias_melastigma
ENSAMXG00000030902	-	52	39.687	ENSPSIG00000000767	-	53	39.687	Pelodiscus_sinensis
ENSAMXG00000030902	-	50	37.741	ENSPSIG00000001658	-	81	37.741	Pelodiscus_sinensis
ENSAMXG00000030902	-	56	36.874	ENSPSIG00000000353	-	68	36.874	Pelodiscus_sinensis
ENSAMXG00000030902	-	63	38.220	ENSPSIG00000000489	-	68	38.351	Pelodiscus_sinensis
ENSAMXG00000030902	-	71	39.758	ENSPSIG00000000994	-	81	39.758	Pelodiscus_sinensis
ENSAMXG00000030902	-	79	33.728	ENSPMEG00000016355	-	91	33.728	Poecilia_mexicana
ENSAMXG00000030902	-	99	49.396	ENSPREG00000000390	-	92	49.562	Poecilia_reticulata
ENSAMXG00000030902	-	99	49.291	ENSPREG00000004954	-	92	49.563	Poecilia_reticulata
ENSAMXG00000030902	-	75	33.892	ENSSDUG00000002460	-	90	32.842	Seriola_dumerili
ENSAMXG00000030902	-	100	45.115	ENSXMAG00000021213	-	92	45.115	Xiphophorus_maculatus
ENSAMXG00000030902	-	88	33.461	ENSXMAG00000030100	-	88	33.691	Xiphophorus_maculatus
ENSAMXG00000030902	-	99	42.991	ENSXMAG00000023079	-	92	42.991	Xiphophorus_maculatus
ENSAMXG00000030902	-	66	50.362	ENSXMAG00000030089	-	88	50.362	Xiphophorus_maculatus
ENSAMXG00000030902	-	88	33.308	ENSXMAG00000026031	-	81	33.691	Xiphophorus_maculatus
ENSAMXG00000030902	-	99	42.924	ENSXMAG00000023503	-	92	42.924	Xiphophorus_maculatus
ENSAMXG00000030902	-	99	50.661	ENSXMAG00000023319	-	92	50.693	Xiphophorus_maculatus
ENSAMXG00000030902	-	99	50.627	ENSXMAG00000021298	-	92	50.660	Xiphophorus_maculatus
ENSAMXG00000030902	-	100	45.183	ENSXMAG00000026594	-	92	45.183	Xiphophorus_maculatus