EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000030934 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 4895 bases
Position: chr10:33772968-33777862
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000044144	zf-CCHC	PF00098.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000055898	-	1974	-	ENSAMXP00000044144	657 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000030934's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000030934's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000030934	-	96	99.842	ENSAMXG00000038544	-	94	99.842
ENSAMXG00000030934	-	97	46.677	ENSAMXG00000042699	-	56	46.615
ENSAMXG00000030934	-	97	48.074	ENSAMXG00000033831	-	81	48.074
ENSAMXG00000030934	-	89	48.990	ENSAMXG00000029689	-	78	48.440
ENSAMXG00000030934	-	96	46.939	ENSAMXG00000036897	-	84	46.939
ENSAMXG00000030934	-	96	44.671	ENSAMXG00000041694	-	65	44.671
ENSAMXG00000030934	-	83	48.732	ENSAMXG00000040915	-	73	45.227
ENSAMXG00000030934	-	92	49.751	ENSAMXG00000043875	-	86	49.751

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000030934	-	56	33.842	ENSAPOG00000012172	-	68	32.908	Acanthochromis_polyacanthus
ENSAMXG00000030934	-	79	31.892	ENSACAG00000029367	-	75	31.986	Anolis_carolinensis
ENSAMXG00000030934	-	89	44.178	ENSIPUG00000000467	-	78	44.178	Ictalurus_punctatus
ENSAMXG00000030934	-	87	47.569	ENSIPUG00000020583	-	81	47.569	Ictalurus_punctatus
ENSAMXG00000030934	-	90	46.701	ENSIPUG00000023478	-	87	46.701	Ictalurus_punctatus
ENSAMXG00000030934	-	87	48.077	ENSIPUG00000009957	-	85	48.077	Ictalurus_punctatus
ENSAMXG00000030934	-	92	36.052	ENSKMAG00000021728	-	89	36.052	Kryptolebias_marmoratus
ENSAMXG00000030934	-	88	33.333	ENSORLG00000004601	-	71	33.333	Oryzias_latipes
ENSAMXG00000030934	-	99	37.082	ENSORLG00000027546	-	87	37.082	Oryzias_latipes
ENSAMXG00000030934	-	93	36.190	ENSORLG00000025074	-	86	36.190	Oryzias_latipes
ENSAMXG00000030934	-	99	36.024	ENSORLG00020019360	-	90	36.024	Oryzias_latipes_hni
ENSAMXG00000030934	-	99	36.173	ENSORLG00020008270	-	89	36.173	Oryzias_latipes_hni
ENSAMXG00000030934	-	85	37.696	ENSORLG00020018037	-	81	37.696	Oryzias_latipes_hni
ENSAMXG00000030934	-	88	41.166	ENSPKIG00000000452	-	87	41.166	Paramormyrops_kingsleyae
ENSAMXG00000030934	-	84	38.889	ENSPKIG00000021000	-	91	39.212	Paramormyrops_kingsleyae
ENSAMXG00000030934	-	97	50.546	ENSPNAG00000003267	-	92	50.858	Pygocentrus_nattereri
ENSAMXG00000030934	-	93	47.308	ENSPNAG00000014076	-	92	47.308	Pygocentrus_nattereri