EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000030961 (Gene tree)
Gene ID: 103032919
Gene Symbol: bicc1b
Alias: bicc1
Full Name: BicC family RNA binding protein 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 178929 bases
Position: chr4:23418618-23597546
Accession: 103032919
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000020014	KH_1	PF00013.29	1.9e-35	1	2
ENSAMXP00000020014	KH_1	PF00013.29	1.9e-35	2	2
ENSAMXP00000037005	KH_1	PF00013.29	2.1e-35	1	2
ENSAMXP00000037005	KH_1	PF00013.29	2.1e-35	2	2
ENSAMXP00000033069	KH_1	PF00013.29	4.6e-31	1	2
ENSAMXP00000033069	KH_1	PF00013.29	4.6e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000020014	-	2823	-	ENSAMXP00000020014	940 (aa)	-	W5LJK2
ENSAMXT00000050047	-	7619	-	ENSAMXP00000033069	955 (aa)	-	-
ENSAMXT00000037163	-	7673	XM_022669360	ENSAMXP00000037005	973 (aa)	XP_022525081	UPI000BBDDF24

Gene Model

Click here to download ENSAMXG00000030961's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000030961's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000030961	bicc1b	68	57.072	ENSAMXG00000017167	bicc2	75	56.086
ENSAMXG00000030961	bicc1b	98	55.622	ENSAMXG00000011396	bicc1a	100	55.422

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000030961	bicc1b	100	76.151	ENSG00000122870	BICC1	100	76.766	Homo_sapiens
ENSAMXG00000030961	bicc1b	100	80.996	ENSAPOG00000004667	bicc1a	100	80.996	Acanthochromis_polyacanthus
ENSAMXG00000030961	bicc1b	94	75.930	ENSAMEG00000013342	BICC1	100	76.586	Ailuropoda_melanoleuca
ENSAMXG00000030961	bicc1b	100	81.384	ENSAOCG00000022325	bicc1a	100	81.384	Amphiprion_ocellaris
ENSAMXG00000030961	bicc1b	100	81.384	ENSAPEG00000005966	bicc1a	100	81.384	Amphiprion_percula
ENSAMXG00000030961	bicc1b	100	80.996	ENSATEG00000008634	bicc1a	100	80.996	Anabas_testudineus
ENSAMXG00000030961	bicc1b	89	76.844	ENSAPLG00000015162	BICC1	100	76.958	Anas_platyrhynchos
ENSAMXG00000030961	bicc1b	99	75.565	ENSACAG00000001892	BICC1	87	75.569	Anolis_carolinensis
ENSAMXG00000030961	bicc1b	97	76.533	ENSANAG00000022803	BICC1	99	77.167	Aotus_nancymaae
ENSAMXG00000030961	bicc1b	100	79.940	ENSACLG00000019426	bicc1a	100	79.980	Astatotilapia_calliptera
ENSAMXG00000030961	bicc1b	100	76.404	ENSBTAG00000010694	BICC1	100	76.404	Bos_taurus
ENSAMXG00000030961	bicc1b	100	76.151	ENSCJAG00000010639	BICC1	91	76.766	Callithrix_jacchus
ENSAMXG00000030961	bicc1b	91	74.662	ENSCAFG00000012331	BICC1	100	76.491	Canis_familiaris
ENSAMXG00000030961	bicc1b	100	75.537	ENSCAFG00020026888	BICC1	100	76.151	Canis_lupus_dingo
ENSAMXG00000030961	bicc1b	100	76.821	ENSCHIG00000009725	BICC1	100	76.821	Capra_hircus
ENSAMXG00000030961	bicc1b	97	76.715	ENSTSYG00000004527	BICC1	98	77.263	Carlito_syrichta
ENSAMXG00000030961	bicc1b	80	79.003	ENSCAPG00000014361	BICC1	92	78.723	Cavia_aperea
ENSAMXG00000030961	bicc1b	93	76.839	ENSCPOG00000015585	BICC1	99	77.497	Cavia_porcellus
ENSAMXG00000030961	bicc1b	100	76.356	ENSCCAG00000028110	BICC1	100	76.970	Cebus_capucinus
ENSAMXG00000030961	bicc1b	100	76.049	ENSCATG00000016603	BICC1	100	76.663	Cercocebus_atys
ENSAMXG00000030961	bicc1b	93	75.495	ENSCLAG00000012171	BICC1	100	76.154	Chinchilla_lanigera
ENSAMXG00000030961	bicc1b	100	76.151	ENSCSAG00000007305	BICC1	100	76.766	Chlorocebus_sabaeus
ENSAMXG00000030961	bicc1b	90	89.474	ENSCHOG00000010828	BICC1	90	89.474	Choloepus_hoffmanni
ENSAMXG00000030961	bicc1b	100	75.810	ENSCPBG00000005820	BICC1	100	77.009	Chrysemys_picta_bellii
ENSAMXG00000030961	bicc1b	91	44.283	ENSCSAVG00000004820	-	100	43.862	Ciona_savignyi
ENSAMXG00000030961	bicc1b	95	77.229	ENSCANG00000037900	BICC1	99	77.873	Colobus_angolensis_palliatus
ENSAMXG00000030961	bicc1b	100	75.307	ENSCGRG00001019138	Bicc1	100	75.820	Cricetulus_griseus_chok1gshd
ENSAMXG00000030961	bicc1b	95	76.165	ENSCGRG00000005736	Bicc1	100	76.706	Cricetulus_griseus_crigri
ENSAMXG00000030961	bicc1b	100	80.645	ENSCSEG00000005038	bicc1a	100	80.789	Cynoglossus_semilaevis
ENSAMXG00000030961	bicc1b	100	80.162	ENSCVAG00000015896	bicc1a	100	79.838	Cyprinodon_variegatus
ENSAMXG00000030961	bicc1b	99	65.187	ENSDARG00000061682	bicc1a	99	64.980	Danio_rerio
ENSAMXG00000030961	bicc1b	92	76.881	ENSDNOG00000009338	BICC1	100	77.405	Dasypus_novemcinctus
ENSAMXG00000030961	bicc1b	100	76.151	ENSDORG00000011450	Bicc1	100	76.766	Dipodomys_ordii
ENSAMXG00000030961	bicc1b	100	66.701	ENSETEG00000010754	BICC1	100	67.213	Echinops_telfairi
ENSAMXG00000030961	bicc1b	78	45.935	ENSEBUG00000016015	-	94	45.078	Eptatretus_burgeri
ENSAMXG00000030961	bicc1b	100	76.049	ENSEASG00005013784	BICC1	100	76.663	Equus_asinus_asinus
ENSAMXG00000030961	bicc1b	100	76.049	ENSECAG00000013979	BICC1	99	76.096	Equus_caballus
ENSAMXG00000030961	bicc1b	86	83.041	ENSEEUG00000001269	BICC1	93	70.339	Erinaceus_europaeus
ENSAMXG00000030961	bicc1b	100	79.797	ENSELUG00000005613	bicc1a	100	80.142	Esox_lucius
ENSAMXG00000030961	bicc1b	100	75.333	ENSFCAG00000006211	BICC1	91	75.947	Felis_catus
ENSAMXG00000030961	bicc1b	92	74.329	ENSFALG00000002247	BICC1	100	74.866	Ficedula_albicollis
ENSAMXG00000030961	bicc1b	93	77.338	ENSFDAG00000016201	BICC1	100	77.998	Fukomys_damarensis
ENSAMXG00000030961	bicc1b	99	73.436	ENSFHEG00000022447	bicc1a	99	73.641	Fundulus_heteroclitus
ENSAMXG00000030961	bicc1b	100	78.012	ENSGMOG00000018749	bicc1a	100	77.009	Gadus_morhua
ENSAMXG00000030961	bicc1b	100	76.946	ENSGALG00000036095	BICC1	98	77.391	Gallus_gallus
ENSAMXG00000030961	bicc1b	96	79.555	ENSGAFG00000012165	bicc1a	98	79.215	Gambusia_affinis
ENSAMXG00000030961	bicc1b	100	77.071	ENSGACG00000010043	bicc1a	100	77.048	Gasterosteus_aculeatus
ENSAMXG00000030961	bicc1b	92	75.528	ENSGAGG00000012189	BICC1	99	76.425	Gopherus_agassizii
ENSAMXG00000030961	bicc1b	100	76.254	ENSGGOG00000005484	BICC1	100	76.868	Gorilla_gorilla
ENSAMXG00000030961	bicc1b	100	80.040	ENSHBUG00000016079	bicc1a	100	80.081	Haplochromis_burtoni
ENSAMXG00000030961	bicc1b	97	74.632	ENSHGLG00000005632	-	99	75.263	Heterocephalus_glaber_female
ENSAMXG00000030961	bicc1b	100	76.127	ENSHGLG00100015631	-	100	76.742	Heterocephalus_glaber_male
ENSAMXG00000030961	bicc1b	100	80.609	ENSHCOG00000017407	bicc1a	100	80.386	Hippocampus_comes
ENSAMXG00000030961	bicc1b	97	94.304	ENSIPUG00000008467	bicc1	100	92.347	Ictalurus_punctatus
ENSAMXG00000030961	bicc1b	97	76.674	ENSSTOG00000000168	BICC1	100	77.249	Ictidomys_tridecemlineatus
ENSAMXG00000030961	bicc1b	98	75.577	ENSJJAG00000015090	Bicc1	99	75.321	Jaculus_jaculus
ENSAMXG00000030961	bicc1b	100	79.878	ENSKMAG00000000780	bicc1a	100	80.081	Kryptolebias_marmoratus
ENSAMXG00000030961	bicc1b	100	81.606	ENSLBEG00000021160	bicc1a	100	81.504	Labrus_bergylta
ENSAMXG00000030961	bicc1b	89	75.995	ENSLACG00000010091	BICC1	100	76.678	Latimeria_chalumnae
ENSAMXG00000030961	bicc1b	100	84.098	ENSLOCG00000006500	bicc1a	100	83.894	Lepisosteus_oculatus
ENSAMXG00000030961	bicc1b	89	76.077	ENSLAFG00000007749	BICC1	100	76.720	Loxodonta_africana
ENSAMXG00000030961	bicc1b	100	76.254	ENSMFAG00000036177	BICC1	100	76.868	Macaca_fascicularis
ENSAMXG00000030961	bicc1b	97	74.869	ENSMMUG00000015750	BICC1	97	77.692	Macaca_mulatta
ENSAMXG00000030961	bicc1b	100	76.254	ENSMNEG00000009601	BICC1	100	76.868	Macaca_nemestrina
ENSAMXG00000030961	bicc1b	99	76.446	ENSMLEG00000040006	BICC1	99	77.066	Mandrillus_leucophaeus
ENSAMXG00000030961	bicc1b	100	81.459	ENSMAMG00000016363	bicc1a	100	81.402	Mastacembelus_armatus
ENSAMXG00000030961	bicc1b	100	79.940	ENSMZEG00005027431	bicc1a	100	79.980	Maylandia_zebra
ENSAMXG00000030961	bicc1b	89	72.614	ENSMGAG00000002729	BICC1	100	72.727	Meleagris_gallopavo
ENSAMXG00000030961	bicc1b	100	74.898	ENSMAUG00000018772	Bicc1	100	75.410	Mesocricetus_auratus
ENSAMXG00000030961	bicc1b	100	76.151	ENSMICG00000002045	BICC1	100	76.766	Microcebus_murinus
ENSAMXG00000030961	bicc1b	100	75.205	ENSMOCG00000020143	Bicc1	100	75.717	Microtus_ochrogaster
ENSAMXG00000030961	bicc1b	100	79.730	ENSMMOG00000008063	bicc1a	100	79.730	Mola_mola
ENSAMXG00000030961	bicc1b	97	74.194	ENSMODG00000016125	BICC1	88	74.714	Monodelphis_domestica
ENSAMXG00000030961	bicc1b	100	79.797	ENSMALG00000019124	bicc1a	100	79.797	Monopterus_albus
ENSAMXG00000030961	bicc1b	100	74.694	MGP_CAROLIEiJ_G0015426	Bicc1	100	75.204	Mus_caroli
ENSAMXG00000030961	bicc1b	100	74.796	ENSMUSG00000014329	Bicc1	100	75.306	Mus_musculus
ENSAMXG00000030961	bicc1b	100	74.975	MGP_PahariEiJ_G0030842	Bicc1	100	75.510	Mus_pahari
ENSAMXG00000030961	bicc1b	100	74.898	MGP_SPRETEiJ_G0016239	Bicc1	100	75.408	Mus_spretus
ENSAMXG00000030961	bicc1b	87	64.344	ENSMPUG00000010431	BICC1	100	64.353	Mustela_putorius_furo
ENSAMXG00000030961	bicc1b	91	74.775	ENSMLUG00000005170	BICC1	99	75.450	Myotis_lucifugus
ENSAMXG00000030961	bicc1b	100	74.795	ENSNGAG00000023605	Bicc1	100	75.410	Nannospalax_galili
ENSAMXG00000030961	bicc1b	100	80.485	ENSNBRG00000015387	bicc1a	100	80.530	Neolamprologus_brichardi
ENSAMXG00000030961	bicc1b	100	76.151	ENSNLEG00000012284	BICC1	100	76.766	Nomascus_leucogenys
ENSAMXG00000030961	bicc1b	78	84.375	ENSMEUG00000005472	BICC1	92	84.802	Notamacropus_eugenii
ENSAMXG00000030961	bicc1b	93	71.460	ENSOPRG00000009804	-	95	79.310	Ochotona_princeps
ENSAMXG00000030961	bicc1b	100	75.742	ENSODEG00000000545	BICC1	100	76.356	Octodon_degus
ENSAMXG00000030961	bicc1b	100	80.040	ENSONIG00000000620	bicc1a	100	80.183	Oreochromis_niloticus
ENSAMXG00000030961	bicc1b	89	66.287	ENSOANG00000013223	BICC1	99	66.090	Ornithorhynchus_anatinus
ENSAMXG00000030961	bicc1b	97	74.351	ENSOCUG00000013696	BICC1	99	74.895	Oryctolagus_cuniculus
ENSAMXG00000030961	bicc1b	100	79.757	ENSORLG00000005313	bicc1a	100	80.224	Oryzias_latipes
ENSAMXG00000030961	bicc1b	100	79.555	ENSORLG00020010305	bicc1a	100	80.020	Oryzias_latipes_hni
ENSAMXG00000030961	bicc1b	100	79.757	ENSORLG00015015393	bicc1a	100	80.224	Oryzias_latipes_hsok
ENSAMXG00000030961	bicc1b	100	80.183	ENSOMEG00000009659	bicc1a	100	79.858	Oryzias_melastigma
ENSAMXG00000030961	bicc1b	100	75.988	ENSOGAG00000000304	BICC1	100	76.561	Otolemur_garnettii
ENSAMXG00000030961	bicc1b	100	76.718	ENSOARG00000004086	BICC1	100	76.718	Ovis_aries
ENSAMXG00000030961	bicc1b	98	76.771	ENSPPAG00000035110	BICC1	100	77.396	Pan_paniscus
ENSAMXG00000030961	bicc1b	100	75.435	ENSPPRG00000023988	BICC1	100	76.049	Panthera_pardus
ENSAMXG00000030961	bicc1b	99	75.909	ENSPTIG00000006974	BICC1	99	76.532	Panthera_tigris_altaica
ENSAMXG00000030961	bicc1b	100	76.254	ENSPTRG00000002520	BICC1	96	77.531	Pan_troglodytes
ENSAMXG00000030961	bicc1b	94	75.515	ENSPANG00000022024	BICC1	95	76.206	Papio_anubis
ENSAMXG00000030961	bicc1b	100	84.404	ENSPKIG00000025290	bicc1b	100	84.184	Paramormyrops_kingsleyae
ENSAMXG00000030961	bicc1b	92	75.996	ENSPSIG00000009802	BICC1	100	76.562	Pelodiscus_sinensis
ENSAMXG00000030961	bicc1b	95	74.840	ENSPMGG00000004168	bicc1a	99	74.648	Periophthalmus_magnuspinnatus
ENSAMXG00000030961	bicc1b	99	76.091	ENSPEMG00000014055	Bicc1	100	76.611	Peromyscus_maniculatus_bairdii
ENSAMXG00000030961	bicc1b	92	55.297	ENSPMAG00000005468	-	99	54.219	Petromyzon_marinus
ENSAMXG00000030961	bicc1b	100	75.859	ENSPCIG00000028868	BICC1	100	76.364	Phascolarctos_cinereus
ENSAMXG00000030961	bicc1b	100	80.406	ENSPFOG00000018348	bicc1a	100	80.081	Poecilia_formosa
ENSAMXG00000030961	bicc1b	100	80.163	ENSPLAG00000010377	bicc1a	100	79.939	Poecilia_latipinna
ENSAMXG00000030961	bicc1b	100	80.406	ENSPMEG00000020413	bicc1a	100	80.081	Poecilia_mexicana
ENSAMXG00000030961	bicc1b	89	90.028	ENSPREG00000010793	bicc1a	100	75.833	Poecilia_reticulata
ENSAMXG00000030961	bicc1b	94	76.721	ENSPPYG00000002429	BICC1	99	77.377	Pongo_abelii
ENSAMXG00000030961	bicc1b	100	71.483	ENSPCAG00000007197	BICC1	100	65.814	Procavia_capensis
ENSAMXG00000030961	bicc1b	100	76.151	ENSPCOG00000028597	BICC1	100	76.766	Propithecus_coquereli
ENSAMXG00000030961	bicc1b	100	71.226	ENSPVAG00000008004	BICC1	100	71.750	Pteropus_vampyrus
ENSAMXG00000030961	bicc1b	100	79.839	ENSPNYG00000002818	bicc1a	100	79.878	Pundamilia_nyererei
ENSAMXG00000030961	bicc1b	100	97.533	ENSPNAG00000019026	bicc1b	100	97.533	Pygocentrus_nattereri
ENSAMXG00000030961	bicc1b	93	59.423	ENSPNAG00000026738	bicc1a	100	59.423	Pygocentrus_nattereri
ENSAMXG00000030961	bicc1b	92	74.367	ENSRNOG00000000614	Bicc1	100	76.281	Rattus_norvegicus
ENSAMXG00000030961	bicc1b	94	73.690	ENSRBIG00000030483	BICC1	97	74.345	Rhinopithecus_bieti
ENSAMXG00000030961	bicc1b	93	76.923	ENSRROG00000017888	BICC1	100	77.740	Rhinopithecus_roxellana
ENSAMXG00000030961	bicc1b	100	76.356	ENSSBOG00000029991	BICC1	100	77.964	Saimiri_boliviensis_boliviensis
ENSAMXG00000030961	bicc1b	97	74.793	ENSSHAG00000011416	BICC1	100	77.619	Sarcophilus_harrisii
ENSAMXG00000030961	bicc1b	100	74.873	ENSSFOG00015008406	BICC1	100	75.381	Scleropages_formosus
ENSAMXG00000030961	bicc1b	100	81.256	ENSSMAG00000017028	bicc1a	100	80.996	Scophthalmus_maximus
ENSAMXG00000030961	bicc1b	100	81.402	ENSSDUG00000017080	bicc1a	100	81.402	Seriola_dumerili
ENSAMXG00000030961	bicc1b	100	81.497	ENSSLDG00000015619	bicc1a	100	81.707	Seriola_lalandi_dorsalis
ENSAMXG00000030961	bicc1b	93	76.128	ENSSARG00000011303	BICC1	100	76.788	Sorex_araneus
ENSAMXG00000030961	bicc1b	100	81.199	ENSSPAG00000015300	bicc1a	100	81.199	Stegastes_partitus
ENSAMXG00000030961	bicc1b	100	75.761	ENSSSCG00000010204	BICC1	99	74.972	Sus_scrofa
ENSAMXG00000030961	bicc1b	93	76.764	ENSTGUG00000005584	BICC1	100	76.873	Taeniopygia_guttata
ENSAMXG00000030961	bicc1b	100	78.463	ENSTRUG00000008560	bicc1a	100	78.491	Takifugu_rubripes
ENSAMXG00000030961	bicc1b	100	77.902	ENSTNIG00000019377	bicc1a	100	77.574	Tetraodon_nigroviridis
ENSAMXG00000030961	bicc1b	96	76.652	ENSTNIG00000017029	-	99	76.307	Tetraodon_nigroviridis
ENSAMXG00000030961	bicc1b	64	74.403	ENSTBEG00000012202	BICC1	68	77.273	Tupaia_belangeri
ENSAMXG00000030961	bicc1b	93	74.891	ENSTTRG00000017309	BICC1	100	75.385	Tursiops_truncatus
ENSAMXG00000030961	bicc1b	96	76.068	ENSUMAG00000006522	BICC1	95	76.791	Ursus_maritimus
ENSAMXG00000030961	bicc1b	66	85.380	ENSVPAG00000008214	BICC1	73	77.833	Vicugna_pacos
ENSAMXG00000030961	bicc1b	100	75.537	ENSVVUG00000008341	BICC1	100	76.151	Vulpes_vulpes
ENSAMXG00000030961	bicc1b	75	68.428	ENSXETG00000005117	bicc1	99	69.726	Xenopus_tropicalis
ENSAMXG00000030961	bicc1b	100	79.797	ENSXMAG00000007368	bicc1a	100	79.472	Xiphophorus_maculatus