EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000030987 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 5642 bases
Position: chr21:13332550-13338191
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000052085	RVT_1	PF00078.27	1.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000055509	-	5642	-	ENSAMXP00000052085	1448 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000030987's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000030987's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000030987	-	58	38.348	ENSAMXG00000031698	-	55	37.642
ENSAMXG00000030987	-	57	41.545	ENSAMXG00000040885	-	64	41.545
ENSAMXG00000030987	-	57	37.788	ENSAMXG00000040149	-	53	37.788
ENSAMXG00000030987	-	56	40.900	ENSAMXG00000043385	-	64	40.619
ENSAMXG00000030987	-	56	31.707	ENSAMXG00000039912	-	55	33.265
ENSAMXG00000030987	-	59	42.799	ENSAMXG00000029230	-	57	43.737
ENSAMXG00000030987	-	56	39.100	ENSAMXG00000040695	-	56	39.100
ENSAMXG00000030987	-	54	42.073	ENSAMXG00000033912	-	67	42.073
ENSAMXG00000030987	-	55	40.000	ENSAMXG00000032571	-	59	40.000
ENSAMXG00000030987	-	54	36.059	ENSAMXG00000041369	-	69	36.059
ENSAMXG00000030987	-	63	36.238	ENSAMXG00000038997	-	54	36.730
ENSAMXG00000030987	-	56	44.864	ENSAMXG00000034382	-	72	44.864
ENSAMXG00000030987	-	57	33.539	ENSAMXG00000042050	-	59	34.199
ENSAMXG00000030987	-	63	36.238	ENSAMXG00000043312	-	54	36.730
ENSAMXG00000030987	-	56	37.995	ENSAMXG00000030902	-	58	37.383
ENSAMXG00000030987	-	54	37.963	ENSAMXG00000042521	-	62	37.963
ENSAMXG00000030987	-	59	32.394	ENSAMXG00000036680	-	60	32.596
ENSAMXG00000030987	-	53	42.656	ENSAMXG00000038531	-	58	42.656
ENSAMXG00000030987	-	59	37.624	ENSAMXG00000044052	-	53	38.380
ENSAMXG00000030987	-	51	37.363	ENSAMXG00000032330	-	52	37.363
ENSAMXG00000030987	-	56	42.082	ENSAMXG00000032559	-	73	42.082
ENSAMXG00000030987	-	61	33.215	ENSAMXG00000035138	-	59	33.892
ENSAMXG00000030987	-	51	36.916	ENSAMXG00000031305	-	78	36.916
ENSAMXG00000030987	-	54	36.853	ENSAMXG00000030022	-	66	36.853
ENSAMXG00000030987	-	55	36.290	ENSAMXG00000032783	-	59	36.680
ENSAMXG00000030987	-	54	41.929	ENSAMXG00000030479	-	58	41.929
ENSAMXG00000030987	-	58	38.876	ENSAMXG00000038578	-	65	37.931
ENSAMXG00000030987	-	58	38.068	ENSAMXG00000040892	-	56	38.409
ENSAMXG00000030987	-	50	50.888	ENSAMXG00000037673	-	76	50.888
ENSAMXG00000030987	-	56	36.260	ENSAMXG00000039110	-	60	36.260
ENSAMXG00000030987	-	55	44.060	ENSAMXG00000039114	-	80	44.060
ENSAMXG00000030987	-	84	59.317	ENSAMXG00000038169	-	96	58.939
ENSAMXG00000030987	-	51	41.223	ENSAMXG00000038338	-	57	40.613

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000030987	-	72	44.321	ENSAPOG00000012135	-	94	44.107	Acanthochromis_polyacanthus
ENSAMXG00000030987	-	62	48.087	ENSAPOG00000008045	-	95	47.978	Acanthochromis_polyacanthus
ENSAMXG00000030987	-	63	36.722	ENSACLG00000013572	-	59	36.079	Astatotilapia_calliptera
ENSAMXG00000030987	-	90	38.765	ENSACLG00000009628	-	89	39.137	Astatotilapia_calliptera
ENSAMXG00000030987	-	69	35.728	ENSACLG00000000499	-	58	36.898	Astatotilapia_calliptera
ENSAMXG00000030987	-	64	38.144	ENSACLG00000002180	-	64	37.155	Astatotilapia_calliptera
ENSAMXG00000030987	-	76	41.447	ENSACLG00000010042	-	90	42.000	Astatotilapia_calliptera
ENSAMXG00000030987	-	72	48.687	ENSACLG00000027730	-	95	48.614	Astatotilapia_calliptera
ENSAMXG00000030987	-	69	35.728	ENSACLG00000014870	-	58	36.898	Astatotilapia_calliptera
ENSAMXG00000030987	-	58	46.767	ENSACLG00000000367	-	93	46.821	Astatotilapia_calliptera
ENSAMXG00000030987	-	62	37.194	ENSACLG00000027291	-	59	36.635	Astatotilapia_calliptera
ENSAMXG00000030987	-	92	38.353	ENSACLG00000026879	-	89	39.021	Astatotilapia_calliptera
ENSAMXG00000030987	-	50	55.707	ENSACLG00000008862	-	100	55.707	Astatotilapia_calliptera
ENSAMXG00000030987	-	57	43.468	ENSACLG00000001563	-	86	42.659	Astatotilapia_calliptera
ENSAMXG00000030987	-	54	37.365	ENSACLG00000015735	-	98	36.691	Astatotilapia_calliptera
ENSAMXG00000030987	-	69	35.728	ENSACLG00000017808	-	58	36.898	Astatotilapia_calliptera
ENSAMXG00000030987	-	91	45.043	ENSACLG00000014619	-	93	45.298	Astatotilapia_calliptera
ENSAMXG00000030987	-	62	37.353	ENSACLG00000018181	-	98	36.791	Astatotilapia_calliptera
ENSAMXG00000030987	-	54	50.063	ENSACLG00000007343	-	96	49.744	Astatotilapia_calliptera
ENSAMXG00000030987	-	50	52.710	ENSACLG00000004062	-	99	52.710	Astatotilapia_calliptera
ENSAMXG00000030987	-	90	38.849	ENSACLG00000025719	-	89	39.181	Astatotilapia_calliptera
ENSAMXG00000030987	-	90	38.633	ENSACLG00000024091	-	89	39.003	Astatotilapia_calliptera
ENSAMXG00000030987	-	69	31.822	ENSACLG00000018060	-	56	32.655	Astatotilapia_calliptera
ENSAMXG00000030987	-	89	40.533	ENSACLG00000017161	-	88	40.383	Astatotilapia_calliptera
ENSAMXG00000030987	-	91	44.971	ENSACLG00000019876	-	93	45.035	Astatotilapia_calliptera
ENSAMXG00000030987	-	55	42.613	ENSCPBG00000011626	-	98	42.613	Chrysemys_picta_bellii
ENSAMXG00000030987	-	53	36.074	ENSCVAG00000009912	-	98	35.732	Cyprinodon_variegatus
ENSAMXG00000030987	-	72	34.236	ENSELUG00000000948	-	83	35.952	Esox_lucius
ENSAMXG00000030987	-	65	34.565	ENSFHEG00000000971	-	87	34.334	Fundulus_heteroclitus
ENSAMXG00000030987	-	50	48.365	ENSGAFG00000009062	-	98	48.638	Gambusia_affinis
ENSAMXG00000030987	-	62	43.939	ENSGAGG00000022240	-	58	43.839	Gopherus_agassizii
ENSAMXG00000030987	-	55	45.721	ENSGAGG00000012039	-	99	45.623	Gopherus_agassizii
ENSAMXG00000030987	-	60	47.753	ENSGAGG00000014450	-	87	44.908	Gopherus_agassizii
ENSAMXG00000030987	-	55	45.721	ENSGAGG00000020521	-	99	45.623	Gopherus_agassizii
ENSAMXG00000030987	-	52	43.423	ENSGAGG00000025282	-	66	43.428	Gopherus_agassizii
ENSAMXG00000030987	-	59	65.076	ENSIPUG00000000601	-	96	65.076	Ictalurus_punctatus
ENSAMXG00000030987	-	56	36.682	ENSMAMG00000018393	-	79	36.417	Mastacembelus_armatus
ENSAMXG00000030987	-	59	40.474	ENSMZEG00005000633	-	83	39.887	Maylandia_zebra
ENSAMXG00000030987	-	89	32.466	ENSORLG00000026873	-	60	37.861	Oryzias_latipes
ENSAMXG00000030987	-	89	40.370	ENSORLG00000030265	-	89	39.722	Oryzias_latipes
ENSAMXG00000030987	-	89	40.253	ENSORLG00000024220	-	89	39.678	Oryzias_latipes
ENSAMXG00000030987	-	58	37.500	ENSORLG00000029675	-	55	36.902	Oryzias_latipes
ENSAMXG00000030987	-	89	32.511	ENSORLG00000026629	-	60	37.754	Oryzias_latipes
ENSAMXG00000030987	-	89	40.074	ENSORLG00000030542	-	89	40.357	Oryzias_latipes
ENSAMXG00000030987	-	90	41.525	ENSORLG00000024904	-	90	41.303	Oryzias_latipes
ENSAMXG00000030987	-	90	39.912	ENSORLG00000026665	-	89	40.089	Oryzias_latipes
ENSAMXG00000030987	-	90	39.912	ENSORLG00000024233	-	89	40.089	Oryzias_latipes
ENSAMXG00000030987	-	68	36.337	ENSORLG00000028632	-	86	38.226	Oryzias_latipes
ENSAMXG00000030987	-	89	40.044	ENSORLG00000027568	-	88	39.896	Oryzias_latipes
ENSAMXG00000030987	-	89	32.438	ENSORLG00000023181	-	60	37.861	Oryzias_latipes
ENSAMXG00000030987	-	58	38.068	ENSORLG00000029874	-	56	37.146	Oryzias_latipes
ENSAMXG00000030987	-	62	38.075	ENSORLG00000026676	-	96	37.861	Oryzias_latipes
ENSAMXG00000030987	-	89	39.928	ENSORLG00000027831	-	91	39.722	Oryzias_latipes
ENSAMXG00000030987	-	82	39.228	ENSORLG00000022369	-	87	39.529	Oryzias_latipes
ENSAMXG00000030987	-	89	39.926	ENSORLG00000028609	-	89	40.208	Oryzias_latipes
ENSAMXG00000030987	-	90	39.839	ENSORLG00000026546	-	89	40.015	Oryzias_latipes
ENSAMXG00000030987	-	89	40.444	ENSORLG00000025739	-	88	40.044	Oryzias_latipes
ENSAMXG00000030987	-	89	39.851	ENSORLG00000028795	-	89	40.135	Oryzias_latipes
ENSAMXG00000030987	-	51	50.267	ENSORLG00000025478	-	97	50.267	Oryzias_latipes
ENSAMXG00000030987	-	89	40.444	ENSORLG00020008293	-	88	40.044	Oryzias_latipes_hni
ENSAMXG00000030987	-	89	39.851	ENSORLG00020001422	-	88	39.926	Oryzias_latipes_hni
ENSAMXG00000030987	-	90	41.377	ENSORLG00020014203	-	89	41.155	Oryzias_latipes_hni
ENSAMXG00000030987	-	90	41.525	ENSORLG00020003869	-	89	41.303	Oryzias_latipes_hni
ENSAMXG00000030987	-	89	41.392	ENSORLG00020020268	-	90	41.168	Oryzias_latipes_hni
ENSAMXG00000030987	-	89	40.000	ENSORLG00015017778	-	89	40.283	Oryzias_latipes_hsok
ENSAMXG00000030987	-	89	40.074	ENSORLG00015018878	-	89	40.360	Oryzias_latipes_hsok
ENSAMXG00000030987	-	89	40.307	ENSOMEG00000003712	-	89	40.899	Oryzias_melastigma
ENSAMXG00000030987	-	89	30.825	ENSOMEG00000009987	-	61	36.120	Oryzias_melastigma
ENSAMXG00000030987	-	88	45.627	ENSPSIG00000000994	-	94	45.302	Pelodiscus_sinensis
ENSAMXG00000030987	-	56	54.756	ENSPSIG00000001658	-	95	54.126	Pelodiscus_sinensis
ENSAMXG00000030987	-	86	44.727	ENSPSIG00000000767	-	94	44.684	Pelodiscus_sinensis
ENSAMXG00000030987	-	72	47.578	ENSPSIG00000000489	-	94	43.063	Pelodiscus_sinensis
ENSAMXG00000030987	-	51	62.133	ENSPSIG00000013781	-	100	61.943	Pelodiscus_sinensis
ENSAMXG00000030987	-	77	48.194	ENSPSIG00000000353	-	96	47.849	Pelodiscus_sinensis
ENSAMXG00000030987	-	53	48.920	ENSPMEG00000019585	-	99	48.917	Poecilia_mexicana
ENSAMXG00000030987	-	71	42.936	ENSPMEG00000016355	-	80	47.363	Poecilia_mexicana
ENSAMXG00000030987	-	58	36.465	ENSPREG00000000390	-	57	36.323	Poecilia_reticulata
ENSAMXG00000030987	-	70	36.415	ENSPREG00000004954	-	69	35.932	Poecilia_reticulata
ENSAMXG00000030987	-	73	42.043	ENSSDUG00000002460	-	99	39.824	Seriola_dumerili
ENSAMXG00000030987	-	69	36.243	ENSXMAG00000026594	-	61	37.621	Xiphophorus_maculatus
ENSAMXG00000030987	-	60	36.871	ENSXMAG00000023319	-	57	36.184	Xiphophorus_maculatus
ENSAMXG00000030987	-	69	33.934	ENSXMAG00000023503	-	61	35.470	Xiphophorus_maculatus
ENSAMXG00000030987	-	84	38.725	ENSXMAG00000030100	-	90	38.727	Xiphophorus_maculatus
ENSAMXG00000030987	-	60	36.871	ENSXMAG00000021298	-	57	36.184	Xiphophorus_maculatus
ENSAMXG00000030987	-	90	39.547	ENSXMAG00000026031	-	90	39.538	Xiphophorus_maculatus
ENSAMXG00000030987	-	69	36.243	ENSXMAG00000030089	-	88	37.554	Xiphophorus_maculatus
ENSAMXG00000030987	-	69	33.934	ENSXMAG00000023079	-	61	35.470	Xiphophorus_maculatus
ENSAMXG00000030987	-	69	36.277	ENSXMAG00000021213	-	61	37.661	Xiphophorus_maculatus