EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000031230 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 3798 bases
Position: chr16:12653319-12657116
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000038105	RVT_1	PF00078.27	4.1e-54	1	1
ENSAMXP00000038105	Exo_endo_phos	PF03372.23	7.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000052839	-	3798	-	ENSAMXP00000038105	1265 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000031230's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000031230's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000031230	-	66	34.286	ENSAMXG00000040121	-	99	34.286
ENSAMXG00000031230	-	80	32.227	ENSAMXG00000036080	-	89	32.227
ENSAMXG00000031230	-	99	47.456	ENSAMXG00000034221	-	99	47.456
ENSAMXG00000031230	-	78	33.468	ENSAMXG00000041150	-	94	33.468
ENSAMXG00000031230	-	97	30.665	ENSAMXG00000037256	-	97	30.665
ENSAMXG00000031230	-	99	31.978	ENSAMXG00000042761	-	99	31.978
ENSAMXG00000031230	-	63	33.007	ENSAMXG00000036752	-	98	33.007
ENSAMXG00000031230	-	78	53.200	ENSAMXG00000037218	-	99	53.200
ENSAMXG00000031230	-	98	31.104	ENSAMXG00000036146	-	98	31.182
ENSAMXG00000031230	-	69	36.219	ENSAMXG00000042337	-	99	36.219
ENSAMXG00000031230	-	65	47.694	ENSAMXG00000033587	-	99	47.694

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000031230	-	94	31.120	ENSAOCG00000008973	-	82	31.120	Amphiprion_ocellaris
ENSAMXG00000031230	-	98	40.316	ENSAPEG00000012642	-	99	40.316	Amphiprion_percula
ENSAMXG00000031230	-	99	32.238	ENSACLG00000014673	-	99	32.394	Astatotilapia_calliptera
ENSAMXG00000031230	-	99	47.854	ENSACLG00000023850	-	99	47.854	Astatotilapia_calliptera
ENSAMXG00000031230	-	65	47.779	ENSACLG00000027045	-	99	47.779	Astatotilapia_calliptera
ENSAMXG00000031230	-	89	31.862	ENSACLG00000018177	-	99	31.862	Astatotilapia_calliptera
ENSAMXG00000031230	-	93	30.628	ENSACLG00000002748	-	99	30.628	Astatotilapia_calliptera
ENSAMXG00000031230	-	85	49.813	ENSACLG00000026023	-	99	49.813	Astatotilapia_calliptera
ENSAMXG00000031230	-	98	43.846	ENSACLG00000012298	-	99	44.019	Astatotilapia_calliptera
ENSAMXG00000031230	-	99	47.968	ENSKMAG00000014428	-	99	47.968	Kryptolebias_marmoratus
ENSAMXG00000031230	-	91	37.822	ENSKMAG00000006598	-	99	38.046	Kryptolebias_marmoratus
ENSAMXG00000031230	-	98	46.013	ENSKMAG00000020345	-	99	46.013	Kryptolebias_marmoratus
ENSAMXG00000031230	-	99	30.496	ENSKMAG00000013004	-	99	30.496	Kryptolebias_marmoratus
ENSAMXG00000031230	-	99	31.447	ENSKMAG00000007098	-	99	31.447	Kryptolebias_marmoratus
ENSAMXG00000031230	-	96	30.757	ENSKMAG00000002601	-	99	30.757	Kryptolebias_marmoratus
ENSAMXG00000031230	-	99	43.606	ENSKMAG00000018279	-	99	43.606	Kryptolebias_marmoratus
ENSAMXG00000031230	-	61	31.242	ENSLBEG00000017877	-	97	31.242	Labrus_bergylta
ENSAMXG00000031230	-	59	33.984	ENSMZEG00005013632	-	99	33.984	Maylandia_zebra
ENSAMXG00000031230	-	79	44.289	ENSMZEG00005001544	-	99	44.289	Maylandia_zebra
ENSAMXG00000031230	-	71	52.423	ENSONIG00000020778	-	99	52.423	Oreochromis_niloticus
ENSAMXG00000031230	-	53	53.502	ENSONIG00000020880	-	100	53.502	Oreochromis_niloticus
ENSAMXG00000031230	-	96	33.875	ENSORLG00000025420	-	98	33.875	Oryzias_latipes
ENSAMXG00000031230	-	98	45.020	ENSORLG00000029419	-	99	45.303	Oryzias_latipes
ENSAMXG00000031230	-	96	33.875	ENSORLG00000026691	-	98	33.875	Oryzias_latipes
ENSAMXG00000031230	-	96	33.712	ENSORLG00000029798	-	98	33.712	Oryzias_latipes
ENSAMXG00000031230	-	62	33.125	ENSORLG00000023193	-	93	32.997	Oryzias_latipes
ENSAMXG00000031230	-	98	45.411	ENSORLG00000024310	-	99	45.411	Oryzias_latipes
ENSAMXG00000031230	-	96	33.794	ENSORLG00020020951	-	98	33.794	Oryzias_latipes_hni
ENSAMXG00000031230	-	99	33.989	ENSORLG00020008142	-	99	34.143	Oryzias_latipes_hni
ENSAMXG00000031230	-	99	50.869	ENSORLG00020000561	-	99	50.869	Oryzias_latipes_hni
ENSAMXG00000031230	-	60	48.560	ENSORLG00020003581	-	94	48.560	Oryzias_latipes_hni
ENSAMXG00000031230	-	70	50.673	ENSORLG00020016539	-	99	50.510	Oryzias_latipes_hni
ENSAMXG00000031230	-	99	50.869	ENSORLG00015013713	-	99	50.869	Oryzias_latipes_hsok
ENSAMXG00000031230	-	99	31.950	ENSORLG00015002129	-	98	31.950	Oryzias_latipes_hsok
ENSAMXG00000031230	-	97	45.772	ENSORLG00015002592	-	96	45.657	Oryzias_latipes_hsok
ENSAMXG00000031230	-	62	46.962	ENSOMEG00000006131	-	99	46.962	Oryzias_melastigma
ENSAMXG00000031230	-	80	31.226	ENSOMEG00000021560	-	98	31.226	Oryzias_melastigma
ENSAMXG00000031230	-	74	33.545	ENSPFOG00000021895	-	96	33.545	Poecilia_formosa
ENSAMXG00000031230	-	98	38.978	ENSPREG00000018911	-	98	38.978	Poecilia_reticulata
ENSAMXG00000031230	-	97	46.129	ENSPREG00000005522	-	99	46.129	Poecilia_reticulata
ENSAMXG00000031230	-	72	35.551	ENSSLDG00000010601	-	86	35.551	Seriola_lalandi_dorsalis
ENSAMXG00000031230	-	79	38.095	ENSXETG00000034016	-	99	38.095	Xenopus_tropicalis
ENSAMXG00000031230	-	94	48.739	ENSXMAG00000028274	-	99	48.739	Xiphophorus_maculatus
ENSAMXG00000031230	-	65	45.531	ENSXMAG00000021762	-	95	45.531	Xiphophorus_maculatus
ENSAMXG00000031230	-	98	34.076	ENSXMAG00000027070	-	98	34.076	Xiphophorus_maculatus
ENSAMXG00000031230	-	67	44.900	ENSXMAG00000024492	-	99	44.900	Xiphophorus_maculatus
ENSAMXG00000031230	-	65	30.769	ENSXMAG00000023805	-	99	30.769	Xiphophorus_maculatus
ENSAMXG00000031230	-	93	31.181	ENSXMAG00000027558	-	95	31.266	Xiphophorus_maculatus