EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAMXG00000031256 (Gene tree)
Gene ID
-
Gene Symbol
zgc:162239
Alias
-
Full Name
zgc:162239
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Plus strand
Length
8511 bases
Position
chr14:8530967-8539477
Accession
ZDB-GENE-070424-28
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000051645MMR_HSR1PF01926.234.3e-0911
ENSAMXP00000040800MMR_HSR1PF01926.235.1e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000035483-234-ENSAMXP0000004963477 (aa)--
ENSAMXT00000038280-537-ENSAMXP00000040800178 (aa)--
ENSAMXT00000041396-960-ENSAMXP00000051645319 (aa)--
Gene Model
Click here to download ENSAMXG00000031256's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000031256's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAMXG00000031256zgc:1622399739.683ENSAMXG00000034678sept9a5841.980
ENSAMXG00000031256zgc:1622398943.902ENSAMXG00000020162sept8a6643.902
ENSAMXG00000031256zgc:1622399155.862ENSAMXG00000017358sept7a6855.862
ENSAMXG00000031256zgc:1622399644.156ENSAMXG00000043013sept9b8944.156
ENSAMXG00000031256zgc:1622399362.838ENSAMXG00000006159sept5a7963.605
ENSAMXG00000031256zgc:1622398765.845ENSAMXG00000037346SEPT48565.845
ENSAMXG00000031256zgc:1622399043.554ENSAMXG00000018729sept38443.554
ENSAMXG00000031256zgc:1622399358.586ENSAMXG00000006164zgc:635878759.184
ENSAMXG00000031256zgc:1622399365.541ENSAMXG00000020058sept4a6765.541
ENSAMXG00000031256zgc:1622399156.507ENSAMXG00000039803sept156755.743
ENSAMXG00000031256zgc:1622398455.431ENSAMXG00000024643sept7b6755.431
ENSAMXG00000031256zgc:1622399158.478ENSAMXG00000039525sept28158.478
ENSAMXG00000031256zgc:1622399044.948ENSAMXG00000013711sept127544.948
ENSAMXG00000031256zgc:1622399241.196ENSAMXG00000018970sept8b6841.196
ENSAMXG00000031256zgc:1622398940.909ENSAMXG00000033660sept66540.909
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000031256zgc:1622399663.344ENSG00000108387SEPT49463.344Homo_sapiens
ENSAMXG00000031256zgc:1622399758.917ENSAPOG00000017596sept4a6658.917Acanthochromis_polyacanthus
ENSAMXG00000031256zgc:1622399066.327ENSAPOG00000004169SEPT48566.327Acanthochromis_polyacanthus
ENSAMXG00000031256zgc:1622399662.620ENSAMEG00000011592SEPT45462.620Ailuropoda_melanoleuca
ENSAMXG00000031256zgc:1622399268.814ENSACIG00000002675SEPT47468.814Amphilophus_citrinellus
ENSAMXG00000031256zgc:1622399360.870ENSACIG00000018748sept4a8162.284Amphilophus_citrinellus
ENSAMXG00000031256zgc:1622399764.669ENSAOCG00000008228SEPT48464.669Amphiprion_ocellaris
ENSAMXG00000031256zgc:1622399758.917ENSAOCG00000015851sept4a8460.000Amphiprion_ocellaris
ENSAMXG00000031256zgc:1622399765.287ENSAPEG00000013889SEPT48165.287Amphiprion_percula
ENSAMXG00000031256zgc:1622399758.917ENSAPEG00000017422sept4a6658.917Amphiprion_percula
ENSAMXG00000031256zgc:1622399760.191ENSATEG00000007945sept4a6760.191Anabas_testudineus
ENSAMXG00000031256zgc:1622399765.506ENSATEG00000010484SEPT48566.549Anabas_testudineus
ENSAMXG00000031256zgc:1622399757.962ENSACAG00000010754-8757.962Anolis_carolinensis
ENSAMXG00000031256zgc:1622399762.102ENSANAG00000032288-8666.000Aotus_nancymaae
ENSAMXG00000031256zgc:1622399648.254ENSANAG00000028439-9946.000Aotus_nancymaae
ENSAMXG00000031256zgc:1622398766.197ENSACLG00000020556SEPT48566.197Astatotilapia_calliptera
ENSAMXG00000031256zgc:1622399362.963ENSACLG00000007242sept4a6062.963Astatotilapia_calliptera
ENSAMXG00000031256zgc:1622399564.495ENSBTAG00000015368SEPT48564.379Bos_taurus
ENSAMXG00000031256zgc:1622395665.000ENSCJAG00000043546-5465.347Callithrix_jacchus
ENSAMXG00000031256zgc:1622399365.203ENSCAFG00020025931SEPT47965.085Canis_lupus_dingo
ENSAMXG00000031256zgc:1622399564.495ENSCHIG00000024623SEPT46464.495Capra_hircus
ENSAMXG00000031256zgc:1622399863.091ENSTSYG00000007856SEPT49662.829Carlito_syrichta
ENSAMXG00000031256zgc:1622399662.058ENSCPOG00000003438SEPT49962.058Cavia_porcellus
ENSAMXG00000031256zgc:1622399662.939ENSCCAG00000033722SEPT49863.823Cebus_capucinus
ENSAMXG00000031256zgc:1622399662.379ENSCLAG00000012112SEPT49962.379Chinchilla_lanigera
ENSAMXG00000031256zgc:1622399662.939ENSCSAG00000005775SEPT46562.939Chlorocebus_sabaeus
ENSAMXG00000031256zgc:1622396553.448ENSCPBG00000005809-7854.622Chrysemys_picta_bellii
ENSAMXG00000031256zgc:1622399663.578ENSCPBG00000015911SEPT46763.578Chrysemys_picta_bellii
ENSAMXG00000031256zgc:1622399663.578ENSCANG00000043093SEPT48666.000Colobus_angolensis_palliatus
ENSAMXG00000031256zgc:1622399663.666ENSCGRG00001020635Sept49963.666Cricetulus_griseus_chok1gshd
ENSAMXG00000031256zgc:1622399663.259ENSCGRG00000016009Sept46563.259Cricetulus_griseus_crigri
ENSAMXG00000031256zgc:1622399066.327ENSCSEG00000009655SEPT48166.327Cynoglossus_semilaevis
ENSAMXG00000031256zgc:1622399759.236ENSCVAG00000005954-8161.733Cyprinodon_variegatus
ENSAMXG00000031256zgc:1622399764.331ENSCVAG00000021688SEPT48665.493Cyprinodon_variegatus
ENSAMXG00000031256zgc:1622399363.514ENSDARG00000010385sept4a6263.514Danio_rerio
ENSAMXG00000031256zgc:1622399764.650ENSDARG00000105271SEPT47564.650Danio_rerio
ENSAMXG00000031256zgc:1622398057.042ENSDARG00000019651zgc:1622397959.641Danio_rerio
ENSAMXG00000031256zgc:1622399663.666ENSDORG00000001966Sept49963.666Dipodomys_ordii
ENSAMXG00000031256zgc:1622399661.859ENSETEG00000013398SEPT48761.859Echinops_telfairi
ENSAMXG00000031256zgc:1622399253.559ENSEBUG00000003857zgc:1622398554.237Eptatretus_burgeri
ENSAMXG00000031256zgc:1622399662.620ENSEASG00005002775SEPT46862.620Equus_asinus_asinus
ENSAMXG00000031256zgc:1622399263.014ENSELUG00000006608-9260.538Esox_lucius
ENSAMXG00000031256zgc:1622399564.839ENSELUG00000007982SEPT48565.141Esox_lucius
ENSAMXG00000031256zgc:1622399662.581ENSELUG00000006509sept4a6362.581Esox_lucius
ENSAMXG00000031256zgc:1622399662.939ENSFCAG00000004488SEPT48466.667Felis_catus
ENSAMXG00000031256zgc:1622399663.578ENSFALG00000013797SEPT46763.578Ficedula_albicollis
ENSAMXG00000031256zgc:1622399662.300ENSFDAG00000014745SEPT48262.179Fukomys_damarensis
ENSAMXG00000031256zgc:1622399759.873ENSFHEG00000000567sept4a9058.491Fundulus_heteroclitus
ENSAMXG00000031256zgc:1622398764.789ENSFHEG00000021445SEPT48564.789Fundulus_heteroclitus
ENSAMXG00000031256zgc:1622399250.853ENSGMOG00000007022-10050.853Gadus_morhua
ENSAMXG00000031256zgc:1622399355.369ENSGMOG00000007005sept4a7355.369Gadus_morhua
ENSAMXG00000031256zgc:1622399764.331ENSGMOG00000011574SEPT46464.331Gadus_morhua
ENSAMXG00000031256zgc:1622399663.578ENSGALG00000035185SEPT46663.578Gallus_gallus
ENSAMXG00000031256zgc:1622398765.845ENSGAFG00000010509SEPT48565.845Gambusia_affinis
ENSAMXG00000031256zgc:1622399461.873ENSGAFG00000001757sept4a6561.873Gambusia_affinis
ENSAMXG00000031256zgc:1622399763.376ENSGACG00000008792SEPT46563.376Gasterosteus_aculeatus
ENSAMXG00000031256zgc:1622399361.953ENSGACG00000020488sept4a8462.034Gasterosteus_aculeatus
ENSAMXG00000031256zgc:1622399762.102ENSGAGG00000005922SEPT46062.102Gopherus_agassizii
ENSAMXG00000031256zgc:1622399462.542ENSHBUG00000005988sept4a8463.051Haplochromis_burtoni
ENSAMXG00000031256zgc:1622399566.775ENSHBUG00000001102SEPT49266.775Haplochromis_burtoni
ENSAMXG00000031256zgc:1622399662.379ENSHGLG00000007661SEPT49962.379Heterocephalus_glaber_female
ENSAMXG00000031256zgc:1622399762.500ENSHGLG00100011068SEPT48163.072Heterocephalus_glaber_male
ENSAMXG00000031256zgc:1622399065.646ENSHCOG00000016706SEPT47965.646Hippocampus_comes
ENSAMXG00000031256zgc:1622399350.168ENSHCOG00000009438sept4a9347.077Hippocampus_comes
ENSAMXG00000031256zgc:1622397968.571ENSIPUG00000007941zgc:1622398467.692Ictalurus_punctatus
ENSAMXG00000031256zgc:1622399362.667ENSIPUG00000008070SEPT4a5762.667Ictalurus_punctatus
ENSAMXG00000031256zgc:1622399467.224ENSIPUG00000007470SEPT48965.611Ictalurus_punctatus
ENSAMXG00000031256zgc:1622399662.701ENSSTOG00000028582SEPT49962.701Ictidomys_tridecemlineatus
ENSAMXG00000031256zgc:1622399663.666ENSJJAG00000022351Sept49963.666Jaculus_jaculus
ENSAMXG00000031256zgc:1622399664.537ENSKMAG00000015750SEPT48464.537Kryptolebias_marmoratus
ENSAMXG00000031256zgc:1622399759.236ENSKMAG00000006586sept4a8561.149Kryptolebias_marmoratus
ENSAMXG00000031256zgc:1622399462.876ENSLBEG00000000185sept4a8162.876Labrus_bergylta
ENSAMXG00000031256zgc:1622398765.845ENSLBEG00000026675SEPT48565.845Labrus_bergylta
ENSAMXG00000031256zgc:1622399763.057ENSLACG00000018670SEPT47763.259Latimeria_chalumnae
ENSAMXG00000031256zgc:1622398165.972ENSLOCG00000004398sept4a7063.964Lepisosteus_oculatus
ENSAMXG00000031256zgc:1622399662.620ENSLAFG00000003381SEPT46662.620Loxodonta_africana
ENSAMXG00000031256zgc:1622398766.549ENSMAMG00000009320SEPT48566.549Mastacembelus_armatus
ENSAMXG00000031256zgc:1622399761.146ENSMAMG00000020986sept4a6061.146Mastacembelus_armatus
ENSAMXG00000031256zgc:1622399666.452ENSMZEG00005015238SEPT49566.452Maylandia_zebra
ENSAMXG00000031256zgc:1622399760.772ENSMZEG00005024888sept4a8762.406Maylandia_zebra
ENSAMXG00000031256zgc:1622399564.821ENSMGAG00000002059SEPT48764.821Meleagris_gallopavo
ENSAMXG00000031256zgc:1622399663.666ENSMAUG00000018468Sept49963.666Mesocricetus_auratus
ENSAMXG00000031256zgc:1622399662.620ENSMICG00000016062SEPT48665.333Microcebus_murinus
ENSAMXG00000031256zgc:1622399663.344ENSMOCG00000022414Sept49963.344Microtus_ochrogaster
ENSAMXG00000031256zgc:1622399065.986ENSMMOG00000011919SEPT48565.986Mola_mola
ENSAMXG00000031256zgc:1622399764.013ENSMMOG00000004005-8564.013Mola_mola
ENSAMXG00000031256zgc:1622399558.387ENSMMOG00000011577sept4a8958.387Mola_mola
ENSAMXG00000031256zgc:1622399665.049ENSMALG00000004418SEPT49065.818Monopterus_albus
ENSAMXG00000031256zgc:1622399763.782MGP_CAROLIEiJ_G0016931Sept49464.220Mus_caroli
ENSAMXG00000031256zgc:1622399763.782ENSMUSG00000020486Sept49963.666Mus_musculus
ENSAMXG00000031256zgc:1622399763.782MGP_PahariEiJ_G0018060Sept49464.220Mus_pahari
ENSAMXG00000031256zgc:1622399763.782MGP_SPRETEiJ_G0017778Sept49963.666Mus_spretus
ENSAMXG00000031256zgc:1622399662.620ENSMLUG00000029785SEPT45362.620Myotis_lucifugus
ENSAMXG00000031256zgc:1622399663.666ENSNGAG00000000527Sept49963.666Nannospalax_galili
ENSAMXG00000031256zgc:1622399062.847ENSNBRG00000002328sept4a9162.847Neolamprologus_brichardi
ENSAMXG00000031256zgc:1622399764.968ENSNBRG00000008584SEPT46464.968Neolamprologus_brichardi
ENSAMXG00000031256zgc:1622399662.379ENSODEG00000011244SEPT49962.379Octodon_degus
ENSAMXG00000031256zgc:1622399764.650ENSONIG00000008130SEPT47364.650Oreochromis_niloticus
ENSAMXG00000031256zgc:1622399362.626ENSONIG00000008732sept4a7762.626Oreochromis_niloticus
ENSAMXG00000031256zgc:1622399662.939ENSOCUG00000009757SEPT46562.939Oryctolagus_cuniculus
ENSAMXG00000031256zgc:1622398766.197ENSORLG00000007856SEPT48566.197Oryzias_latipes
ENSAMXG00000031256zgc:1622399361.616ENSORLG00000002766sept4a6561.616Oryzias_latipes
ENSAMXG00000031256zgc:1622399361.616ENSORLG00020016855sept4a6761.616Oryzias_latipes_hni
ENSAMXG00000031256zgc:1622398766.197ENSORLG00020000643SEPT48566.197Oryzias_latipes_hni
ENSAMXG00000031256zgc:1622399361.953ENSORLG00015001204sept4a6761.953Oryzias_latipes_hsok
ENSAMXG00000031256zgc:1622398766.197ENSORLG00015002602SEPT48566.197Oryzias_latipes_hsok
ENSAMXG00000031256zgc:1622399361.953ENSOMEG00000009047sept4a5861.953Oryzias_melastigma
ENSAMXG00000031256zgc:1622398766.197ENSOMEG00000016432SEPT48566.197Oryzias_melastigma
ENSAMXG00000031256zgc:1622399662.620ENSOGAG00000004928SEPT46562.620Otolemur_garnettii
ENSAMXG00000031256zgc:1622399662.939ENSPPRG00000022781SEPT48466.667Panthera_pardus
ENSAMXG00000031256zgc:1622399662.939ENSPTIG00000014205SEPT48663.380Panthera_tigris_altaica
ENSAMXG00000031256zgc:1622399663.259ENSPANG00000022286SEPT49963.423Papio_anubis
ENSAMXG00000031256zgc:1622399861.465ENSPKIG00000018498sept4a7161.465Paramormyrops_kingsleyae
ENSAMXG00000031256zgc:1622399065.646ENSPKIG00000005907SEPT48565.646Paramormyrops_kingsleyae
ENSAMXG00000031256zgc:1622398165.972ENSPSIG00000014354-7156.202Pelodiscus_sinensis
ENSAMXG00000031256zgc:1622398462.547ENSPMGG00000005528sept4a8262.547Periophthalmus_magnuspinnatus
ENSAMXG00000031256zgc:1622399750.949ENSPMGG00000021141SEPT46550.949Periophthalmus_magnuspinnatus
ENSAMXG00000031256zgc:1622399663.666ENSPEMG00000015994Sept49963.666Peromyscus_maniculatus_bairdii
ENSAMXG00000031256zgc:1622399360.135ENSPMAG00000003139zgc:1622397760.135Petromyzon_marinus
ENSAMXG00000031256zgc:1622399762.102ENSPCIG00000015596SEPT46962.102Phascolarctos_cinereus
ENSAMXG00000031256zgc:1622399759.554ENSPFOG00000010456sept4a6459.554Poecilia_formosa
ENSAMXG00000031256zgc:1622399863.950ENSPFOG00000015200SEPT46763.950Poecilia_formosa
ENSAMXG00000031256zgc:1622399759.554ENSPLAG00000019026sept4a9360.510Poecilia_latipinna
ENSAMXG00000031256zgc:1622397562.687ENSPLAG00000018091sept4a9363.043Poecilia_latipinna
ENSAMXG00000031256zgc:1622399664.952ENSPLAG00000000023SEPT48565.493Poecilia_latipinna
ENSAMXG00000031256zgc:1622399759.554ENSPMEG00000014050sept4a6659.554Poecilia_mexicana
ENSAMXG00000031256zgc:1622399764.331ENSPMEG00000014632SEPT48565.493Poecilia_mexicana
ENSAMXG00000031256zgc:1622399759.873ENSPREG00000008912sept4a6159.873Poecilia_reticulata
ENSAMXG00000031256zgc:1622398765.493ENSPREG00000022047SEPT48565.493Poecilia_reticulata
ENSAMXG00000031256zgc:1622399663.259ENSPPYG00000008229SEPT46563.259Pongo_abelii
ENSAMXG00000031256zgc:1622399662.939ENSPCOG00000024780SEPT48665.333Propithecus_coquereli
ENSAMXG00000031256zgc:1622398865.480ENSPVAG00000002325SEPT45965.480Pteropus_vampyrus
ENSAMXG00000031256zgc:1622399761.039ENSPNYG00000018040sept4a9162.085Pundamilia_nyererei
ENSAMXG00000031256zgc:1622399765.190ENSPNYG00000016710SEPT47265.190Pundamilia_nyererei
ENSAMXG00000031256zgc:1622399370.946ENSPNAG00000015185zgc:1622398670.946Pygocentrus_nattereri
ENSAMXG00000031256zgc:1622399366.216ENSPNAG00000015089sept4a8667.010Pygocentrus_nattereri
ENSAMXG00000031256zgc:1622399065.986ENSPNAG00000007157SEPT48565.986Pygocentrus_nattereri
ENSAMXG00000031256zgc:1622399663.987ENSRNOG00000007367Sept410068.354Rattus_norvegicus
ENSAMXG00000031256zgc:1622399663.578ENSRBIG00000027007SEPT48666.000Rhinopithecus_bieti
ENSAMXG00000031256zgc:1622399663.578ENSRROG00000031893SEPT48666.000Rhinopithecus_roxellana
ENSAMXG00000031256zgc:1622399662.939ENSSBOG00000021401SEPT49963.087Saimiri_boliviensis_boliviensis
ENSAMXG00000031256zgc:1622399662.300ENSSHAG00000010070SEPT46662.300Sarcophilus_harrisii
ENSAMXG00000031256zgc:1622399764.968ENSSFOG00015002137SEPT47766.197Scleropages_formosus
ENSAMXG00000031256zgc:1622399365.320ENSSFOG00015006345sept4a6565.320Scleropages_formosus
ENSAMXG00000031256zgc:1622399758.917ENSSMAG00000019627sept4a6158.917Scophthalmus_maximus
ENSAMXG00000031256zgc:1622399465.574ENSSMAG00000016821SEPT49066.230Scophthalmus_maximus
ENSAMXG00000031256zgc:1622399765.506ENSSDUG00000020367SEPT48566.549Seriola_dumerili
ENSAMXG00000031256zgc:1622399362.162ENSSDUG00000017913sept4a8460.616Seriola_dumerili
ENSAMXG00000031256zgc:1622399760.191ENSSLDG00000015580sept4a5860.191Seriola_lalandi_dorsalis
ENSAMXG00000031256zgc:1622399066.327ENSSLDG00000021047SEPT48566.327Seriola_lalandi_dorsalis
ENSAMXG00000031256zgc:1622399662.939ENSSARG00000012784SEPT46662.939Sorex_araneus
ENSAMXG00000031256zgc:1622399661.859ENSSPUG00000000871-8561.859Sphenodon_punctatus
ENSAMXG00000031256zgc:1622398766.549ENSSPAG00000004946SEPT47866.549Stegastes_partitus
ENSAMXG00000031256zgc:1622399758.280ENSSPAG00000008751sept4a8660.554Stegastes_partitus
ENSAMXG00000031256zgc:1622399663.259ENSSSCG00000017643SEPT48263.141Sus_scrofa
ENSAMXG00000031256zgc:1622399764.331ENSTRUG00000015731SEPT47764.331Takifugu_rubripes
ENSAMXG00000031256zgc:1622397861.871ENSTRUG00000010944sept4a8861.972Takifugu_rubripes
ENSAMXG00000031256zgc:1622399763.722ENSTNIG00000005815SEPT48363.722Tetraodon_nigroviridis
ENSAMXG00000031256zgc:1622399759.365ENSTNIG00000003311sept4a7959.365Tetraodon_nigroviridis
ENSAMXG00000031256zgc:1622398663.214ENSTBEG00000010153SEPT45963.214Tupaia_belangeri
ENSAMXG00000031256zgc:1622399658.147ENSTTRG00000006853SEPT46858.147Tursiops_truncatus
ENSAMXG00000031256zgc:1622399662.620ENSUAMG00000005181SEPT46862.620Ursus_americanus
ENSAMXG00000031256zgc:1622399662.620ENSUMAG00000022793SEPT48262.500Ursus_maritimus
ENSAMXG00000031256zgc:1622398165.972ENSVPAG00000001810SEPT45364.427Vicugna_pacos
ENSAMXG00000031256zgc:1622399662.620ENSVVUG00000012618SEPT49363.518Vulpes_vulpes
ENSAMXG00000031256zgc:1622399661.587ENSXETG00000030625SEPT48261.587Xenopus_tropicalis
ENSAMXG00000031256zgc:1622399759.873ENSXCOG00000007196sept4a9760.194Xiphophorus_couchianus
ENSAMXG00000031256zgc:1622399566.340ENSXCOG00000012748SEPT48966.340Xiphophorus_couchianus
ENSAMXG00000031256zgc:1622399361.486ENSXMAG00000011277sept4a7461.486Xiphophorus_maculatus
ENSAMXG00000031256zgc:1622399566.667ENSXMAG00000008630SEPT48565.845Xiphophorus_maculatus

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