EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000031328 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 6353 bases
Position: chr20:11184806-11191158
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000052462	PARP	PF00644.20	6.1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000041820	-	3808	-	ENSAMXP00000052462	405 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000031328's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000031328's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000031328	-	96	38.191	ENSAMXG00000043329	-	55	38.191
ENSAMXG00000031328	-	100	74.568	ENSAMXG00000010091	-	57	74.568
ENSAMXG00000031328	-	96	41.103	ENSAMXG00000031852	-	56	41.103
ENSAMXG00000031328	-	53	32.900	ENSAMXG00000005564	parp11	58	33.831

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000031328	-	50	49.505	ENSACIG00000001702	-	90	49.505	Amphilophus_citrinellus
ENSAMXG00000031328	-	99	50.617	ENSAOCG00000020608	-	70	52.044	Amphiprion_ocellaris
ENSAMXG00000031328	-	99	51.111	ENSAPEG00000022069	-	87	51.111	Amphiprion_percula
ENSAMXG00000031328	-	56	54.348	ENSATEG00000012144	-	53	54.348	Anabas_testudineus
ENSAMXG00000031328	-	98	51.358	ENSATEG00000012173	-	96	51.358	Anabas_testudineus
ENSAMXG00000031328	-	89	51.359	ENSACLG00000005627	-	94	51.359	Astatotilapia_calliptera
ENSAMXG00000031328	-	83	54.810	ENSACLG00000005600	-	99	54.810	Astatotilapia_calliptera
ENSAMXG00000031328	-	81	49.547	ENSCSEG00000009834	-	100	49.547	Cynoglossus_semilaevis
ENSAMXG00000031328	-	99	48.762	ENSCVAG00000009352	-	88	56.491	Cyprinodon_variegatus
ENSAMXG00000031328	-	92	30.649	ENSDARG00000098398	CABZ01079480.1	75	30.649	Danio_rerio
ENSAMXG00000031328	-	100	52.300	ENSELUG00000013643	-	57	52.300	Esox_lucius
ENSAMXG00000031328	-	72	39.863	ENSFHEG00000011780	-	97	39.863	Fundulus_heteroclitus
ENSAMXG00000031328	-	67	55.109	ENSGAFG00000015867	-	99	55.109	Gambusia_affinis
ENSAMXG00000031328	-	72	55.631	ENSHBUG00000015159	-	99	55.631	Haplochromis_burtoni
ENSAMXG00000031328	-	89	50.815	ENSHBUG00000015143	-	98	50.815	Haplochromis_burtoni
ENSAMXG00000031328	-	100	65.517	ENSIPUG00000019562	-	87	68.571	Ictalurus_punctatus
ENSAMXG00000031328	-	96	49.114	ENSKMAG00000010882	-	68	52.991	Kryptolebias_marmoratus
ENSAMXG00000031328	-	89	48.774	ENSMAMG00000018192	-	97	48.774	Mastacembelus_armatus
ENSAMXG00000031328	-	67	53.455	ENSMAMG00000018261	-	92	53.455	Mastacembelus_armatus
ENSAMXG00000031328	-	98	51.117	ENSMZEG00005027852	-	79	51.117	Maylandia_zebra
ENSAMXG00000031328	-	99	49.756	ENSMZEG00005002038	-	95	49.756	Maylandia_zebra
ENSAMXG00000031328	-	67	55.678	ENSMZEG00005027858	-	99	55.678	Maylandia_zebra
ENSAMXG00000031328	-	94	51.804	ENSMALG00000004165	-	96	51.804	Monopterus_albus
ENSAMXG00000031328	-	72	52.218	ENSNBRG00000003116	-	96	52.218	Neolamprologus_brichardi
ENSAMXG00000031328	-	89	50.811	ENSNBRG00000002998	-	99	55.311	Neolamprologus_brichardi
ENSAMXG00000031328	-	96	51.654	ENSONIG00000000241	-	77	51.654	Oreochromis_niloticus
ENSAMXG00000031328	-	96	51.282	ENSORLG00020014046	-	98	54.762	Oryzias_latipes_hni
ENSAMXG00000031328	-	99	49.510	ENSORLG00020014210	-	87	49.510	Oryzias_latipes_hni
ENSAMXG00000031328	-	87	52.408	ENSORLG00015004157	-	98	55.556	Oryzias_latipes_hsok
ENSAMXG00000031328	-	99	48.039	ENSORLG00015004253	-	96	50.000	Oryzias_latipes_hsok
ENSAMXG00000031328	-	67	52.899	ENSOMEG00000009413	-	99	52.899	Oryzias_melastigma
ENSAMXG00000031328	-	67	53.818	ENSPMGG00000011629	-	95	53.818	Periophthalmus_magnuspinnatus
ENSAMXG00000031328	-	82	53.274	ENSPMEG00000003192	-	99	53.274	Poecilia_mexicana
ENSAMXG00000031328	-	70	52.941	ENSPREG00000017145	-	99	54.745	Poecilia_reticulata
ENSAMXG00000031328	-	97	44.500	ENSPNYG00000006865	-	54	48.000	Pundamilia_nyererei
ENSAMXG00000031328	-	82	53.412	ENSPNYG00000003575	-	99	53.412	Pundamilia_nyererei
ENSAMXG00000031328	-	72	55.631	ENSPNYG00000008208	-	99	55.631	Pundamilia_nyererei
ENSAMXG00000031328	-	70	50.000	ENSPNYG00000023890	-	94	52.982	Pundamilia_nyererei
ENSAMXG00000031328	-	67	69.963	ENSPNAG00000004111	-	93	69.963	Pygocentrus_nattereri
ENSAMXG00000031328	-	67	69.343	ENSPNAG00000026750	-	91	69.343	Pygocentrus_nattereri
ENSAMXG00000031328	-	91	30.287	ENSPNAG00000006111	-	77	30.287	Pygocentrus_nattereri
ENSAMXG00000031328	-	67	64.706	ENSPNAG00000005029	-	100	64.706	Pygocentrus_nattereri
ENSAMXG00000031328	-	99	48.894	ENSSMAG00000016922	-	50	63.402	Scophthalmus_maximus
ENSAMXG00000031328	-	99	49.878	ENSSDUG00000013560	-	62	49.878	Seriola_dumerili
ENSAMXG00000031328	-	67	55.311	ENSSLDG00000011620	-	92	55.311	Seriola_lalandi_dorsalis
ENSAMXG00000031328	-	92	46.154	ENSSPAG00000014708	-	90	56.747	Stegastes_partitus
ENSAMXG00000031328	-	67	51.812	ENSTRUG00000010891	-	99	51.812	Takifugu_rubripes
ENSAMXG00000031328	-	99	46.814	ENSTNIG00000018877	-	81	46.814	Tetraodon_nigroviridis
ENSAMXG00000031328	-	69	51.961	ENSXCOG00000012535	-	99	53.650	Xiphophorus_couchianus
ENSAMXG00000031328	-	99	49.257	ENSXMAG00000015158	-	68	49.257	Xiphophorus_maculatus