EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000031410 (Gene tree)
Gene ID: 111191379
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC111191379
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 6831 bases
Position: chrAPWO02000061.1:1105064-1111894
Accession: 111191379
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000052191	MMR_HSR1	PF01926.23	4.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000030973	-	4625	XM_022666226	ENSAMXP00000052191	1295 (aa)	XP_022521947	UPI000BBD4A63

Gene Model

Click here to download ENSAMXG00000031410's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000031410's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000031410	-	100	94.903	ENSAMXG00000033978	-	100	94.903

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000031410	-	79	43.080	ENSACAG00000028691	-	95	43.457	Anolis_carolinensis
ENSAMXG00000031410	-	95	42.581	ENSACLG00000022932	-	99	42.500	Astatotilapia_calliptera
ENSAMXG00000031410	-	71	38.745	ENSCPBG00000009862	-	81	38.745	Chrysemys_picta_bellii
ENSAMXG00000031410	-	95	45.120	ENSELUG00000007062	-	95	44.960	Esox_lucius
ENSAMXG00000031410	-	99	60.249	ENSELUG00000005671	-	99	60.249	Esox_lucius
ENSAMXG00000031410	-	87	48.367	ENSGAGG00000006690	-	99	48.191	Gopherus_agassizii
ENSAMXG00000031410	-	98	42.498	ENSKMAG00000016912	-	98	42.577	Kryptolebias_marmoratus
ENSAMXG00000031410	-	97	43.592	ENSKMAG00000011534	-	99	43.592	Kryptolebias_marmoratus
ENSAMXG00000031410	-	99	74.323	ENSPNAG00000004915	-	99	74.014	Pygocentrus_nattereri
ENSAMXG00000031410	-	99	42.434	ENSSMAG00000004655	-	99	42.434	Scophthalmus_maximus
ENSAMXG00000031410	-	97	43.434	ENSSDUG00000017025	-	99	43.434	Seriola_dumerili
ENSAMXG00000031410	-	90	44.604	ENSSLDG00000002567	-	100	44.413	Seriola_lalandi_dorsalis
ENSAMXG00000031410	-	66	36.185	ENSSPUG00000001864	-	91	36.185	Sphenodon_punctatus
ENSAMXG00000031410	-	71	44.122	ENSSPUG00000001872	-	89	44.122	Sphenodon_punctatus
ENSAMXG00000031410	-	97	42.846	ENSXMAG00000024425	-	99	42.768	Xiphophorus_maculatus