EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000031479 (Gene tree)
Gene ID: 103024327
Gene Symbol: rpusd4
Alias: si:ch211-14i3.3|zgc:92006
Full Name: RNA pseudouridylate synthase domain-containing protein 4-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 5777 bases
Position: chr22:28323576-28329352
Accession: 103024327
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000048231	PseudoU_synth_2	PF00849.22	6.1e-30	1	1
ENSAMXP00000033616	PseudoU_synth_2	PF00849.22	7.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000052028	-	1305	XM_007247713	ENSAMXP00000033616	383 (aa)	XP_007247775	UPI000BBDB21E
ENSAMXT00000053609	-	1218	-	ENSAMXP00000048231	354 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000031479's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000031479's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000031479	rpusd4	89	51.104	ENSG00000165526	RPUSD4	83	51.104	Homo_sapiens
ENSAMXG00000031479	rpusd4	95	59.882	ENSAPOG00000011024	rpusd4	84	59.882	Acanthochromis_polyacanthus
ENSAMXG00000031479	rpusd4	95	50.445	ENSAMEG00000000127	-	90	50.000	Ailuropoda_melanoleuca
ENSAMXG00000031479	rpusd4	66	52.577	ENSAMEG00000005953	-	94	52.577	Ailuropoda_melanoleuca
ENSAMXG00000031479	rpusd4	93	59.940	ENSACIG00000003533	rpusd4	95	60.671	Amphilophus_citrinellus
ENSAMXG00000031479	rpusd4	95	59.467	ENSAOCG00000015409	rpusd4	83	59.467	Amphiprion_ocellaris
ENSAMXG00000031479	rpusd4	95	59.763	ENSAPEG00000018935	rpusd4	83	59.763	Amphiprion_percula
ENSAMXG00000031479	rpusd4	95	60.472	ENSATEG00000008059	rpusd4	86	59.429	Anabas_testudineus
ENSAMXG00000031479	rpusd4	78	52.518	ENSAPLG00000013250	RPUSD4	99	51.701	Anas_platyrhynchos
ENSAMXG00000031479	rpusd4	97	51.297	ENSACAG00000000189	RPUSD4	94	51.297	Anolis_carolinensis
ENSAMXG00000031479	rpusd4	91	50.462	ENSANAG00000024050	RPUSD4	91	48.127	Aotus_nancymaae
ENSAMXG00000031479	rpusd4	95	61.834	ENSACLG00000020996	rpusd4	89	60.571	Astatotilapia_calliptera
ENSAMXG00000031479	rpusd4	92	52.439	ENSBTAG00000020900	RPUSD4	85	52.439	Bos_taurus
ENSAMXG00000031479	rpusd4	92	49.390	ENSCJAG00000042850	RPUSD4	86	47.977	Callithrix_jacchus
ENSAMXG00000031479	rpusd4	85	54.125	ENSCAFG00000010488	RPUSD4	85	51.988	Canis_familiaris
ENSAMXG00000031479	rpusd4	85	54.125	ENSCAFG00020010621	RPUSD4	85	51.988	Canis_lupus_dingo
ENSAMXG00000031479	rpusd4	94	51.952	ENSCHIG00000009975	RPUSD4	93	48.138	Capra_hircus
ENSAMXG00000031479	rpusd4	95	50.148	ENSTSYG00000008456	RPUSD4	90	49.275	Carlito_syrichta
ENSAMXG00000031479	rpusd4	69	49.388	ENSCAPG00000006040	RPUSD4	93	49.388	Cavia_aperea
ENSAMXG00000031479	rpusd4	95	51.183	ENSCPOG00000014971	RPUSD4	90	50.432	Cavia_porcellus
ENSAMXG00000031479	rpusd4	95	48.961	ENSCCAG00000027838	RPUSD4	89	48.961	Cebus_capucinus
ENSAMXG00000031479	rpusd4	95	48.378	ENSCATG00000041570	RPUSD4	90	47.989	Cercocebus_atys
ENSAMXG00000031479	rpusd4	95	52.367	ENSCLAG00000016553	RPUSD4	90	51.873	Chinchilla_lanigera
ENSAMXG00000031479	rpusd4	95	46.467	ENSCSAG00000002274	RPUSD4	96	46.467	Chlorocebus_sabaeus
ENSAMXG00000031479	rpusd4	77	50.000	ENSCHOG00000010249	RPUSD4	95	50.000	Choloepus_hoffmanni
ENSAMXG00000031479	rpusd4	81	56.446	ENSCPBG00000011175	RPUSD4	99	56.446	Chrysemys_picta_bellii
ENSAMXG00000031479	rpusd4	94	34.593	ENSCSAVG00000000872	-	65	34.593	Ciona_savignyi
ENSAMXG00000031479	rpusd4	95	48.968	ENSCANG00000039684	RPUSD4	88	48.968	Colobus_angolensis_palliatus
ENSAMXG00000031479	rpusd4	95	49.852	ENSCGRG00001024141	Rpusd4	96	47.425	Cricetulus_griseus_chok1gshd
ENSAMXG00000031479	rpusd4	95	49.852	ENSCGRG00000014415	Rpusd4	96	47.425	Cricetulus_griseus_crigri
ENSAMXG00000031479	rpusd4	55	47.761	ENSCSEG00000006462	-	89	46.948	Cynoglossus_semilaevis
ENSAMXG00000031479	rpusd4	93	61.515	ENSCVAG00000008761	rpusd4	86	59.884	Cyprinodon_variegatus
ENSAMXG00000031479	rpusd4	95	60.294	ENSCVAG00000000392	rpusd4	98	59.026	Cyprinodon_variegatus
ENSAMXG00000031479	rpusd4	97	69.096	ENSDARG00000012674	rpusd4	98	68.362	Danio_rerio
ENSAMXG00000031479	rpusd4	93	50.152	ENSDNOG00000020026	RPUSD4	87	50.152	Dasypus_novemcinctus
ENSAMXG00000031479	rpusd4	95	45.528	ENSDORG00000016717	Rpusd4	96	45.799	Dipodomys_ordii
ENSAMXG00000031479	rpusd4	95	52.522	ENSETEG00000013953	RPUSD4	88	52.522	Echinops_telfairi
ENSAMXG00000031479	rpusd4	95	51.039	ENSEASG00005022982	RPUSD4	90	49.575	Equus_asinus_asinus
ENSAMXG00000031479	rpusd4	95	51.335	ENSECAG00000000557	RPUSD4	88	51.335	Equus_caballus
ENSAMXG00000031479	rpusd4	75	56.180	ENSEEUG00000014036	RPUSD4	72	56.180	Erinaceus_europaeus
ENSAMXG00000031479	rpusd4	99	61.281	ENSELUG00000008075	rpusd4	93	61.690	Esox_lucius
ENSAMXG00000031479	rpusd4	85	52.318	ENSFCAG00000029789	RPUSD4	88	49.258	Felis_catus
ENSAMXG00000031479	rpusd4	94	50.448	ENSFALG00000005171	RPUSD4	97	50.448	Ficedula_albicollis
ENSAMXG00000031479	rpusd4	95	51.039	ENSFDAG00000014307	RPUSD4	91	50.289	Fukomys_damarensis
ENSAMXG00000031479	rpusd4	96	58.601	ENSFHEG00000004329	rpusd4	97	55.263	Fundulus_heteroclitus
ENSAMXG00000031479	rpusd4	92	55.521	ENSGMOG00000017726	rpusd4	96	55.521	Gadus_morhua
ENSAMXG00000031479	rpusd4	78	53.957	ENSGALG00000024326	RPUSD4	92	49.699	Gallus_gallus
ENSAMXG00000031479	rpusd4	95	57.988	ENSGAFG00000021559	rpusd4	86	57.988	Gambusia_affinis
ENSAMXG00000031479	rpusd4	95	57.567	ENSGACG00000001657	rpusd4	99	58.160	Gasterosteus_aculeatus
ENSAMXG00000031479	rpusd4	98	51.437	ENSGAGG00000000132	RPUSD4	95	51.412	Gopherus_agassizii
ENSAMXG00000031479	rpusd4	89	51.104	ENSGGOG00000016494	RPUSD4	83	51.104	Gorilla_gorilla
ENSAMXG00000031479	rpusd4	95	61.834	ENSHBUG00000022838	rpusd4	89	60.571	Haplochromis_burtoni
ENSAMXG00000031479	rpusd4	95	50.148	ENSHGLG00000002285	RPUSD4	90	48.725	Heterocephalus_glaber_female
ENSAMXG00000031479	rpusd4	95	50.148	ENSHGLG00100006385	RPUSD4	90	48.725	Heterocephalus_glaber_male
ENSAMXG00000031479	rpusd4	95	57.227	ENSHCOG00000006612	rpusd4	91	55.096	Hippocampus_comes
ENSAMXG00000031479	rpusd4	94	76.048	ENSIPUG00000023879	rusd4	90	74.286	Ictalurus_punctatus
ENSAMXG00000031479	rpusd4	95	50.148	ENSSTOG00000025280	RPUSD4	93	49.422	Ictidomys_tridecemlineatus
ENSAMXG00000031479	rpusd4	94	51.343	ENSJJAG00000018673	Rpusd4	89	51.343	Jaculus_jaculus
ENSAMXG00000031479	rpusd4	99	57.910	ENSKMAG00000021805	rpusd4	93	58.056	Kryptolebias_marmoratus
ENSAMXG00000031479	rpusd4	99	59.490	ENSLBEG00000020394	rpusd4	97	59.490	Labrus_bergylta
ENSAMXG00000031479	rpusd4	93	53.474	ENSLACG00000011028	RPUSD4	86	52.754	Latimeria_chalumnae
ENSAMXG00000031479	rpusd4	94	47.478	ENSLOCG00000003124	rpusd4	88	47.478	Lepisosteus_oculatus
ENSAMXG00000031479	rpusd4	95	50.148	ENSLAFG00000005211	RPUSD4	100	43.345	Loxodonta_africana
ENSAMXG00000031479	rpusd4	95	48.968	ENSMFAG00000039513	RPUSD4	90	48.563	Macaca_fascicularis
ENSAMXG00000031479	rpusd4	95	48.673	ENSMMUG00000007933	RPUSD4	90	48.276	Macaca_mulatta
ENSAMXG00000031479	rpusd4	95	48.968	ENSMNEG00000027414	RPUSD4	90	48.563	Macaca_nemestrina
ENSAMXG00000031479	rpusd4	95	48.968	ENSMLEG00000042461	RPUSD4	90	48.563	Mandrillus_leucophaeus
ENSAMXG00000031479	rpusd4	99	57.910	ENSMAMG00000023839	rpusd4	91	58.120	Mastacembelus_armatus
ENSAMXG00000031479	rpusd4	95	61.834	ENSMZEG00005011999	rpusd4	89	60.571	Maylandia_zebra
ENSAMXG00000031479	rpusd4	78	51.439	ENSMGAG00000000840	RPUSD4	99	49.691	Meleagris_gallopavo
ENSAMXG00000031479	rpusd4	95	50.148	ENSMAUG00000010280	Rpusd4	88	50.148	Mesocricetus_auratus
ENSAMXG00000031479	rpusd4	95	49.852	ENSMICG00000015979	RPUSD4	89	53.000	Microcebus_murinus
ENSAMXG00000031479	rpusd4	95	47.478	ENSMOCG00000000661	Rpusd4	91	46.839	Microtus_ochrogaster
ENSAMXG00000031479	rpusd4	87	61.613	ENSMMOG00000021731	rpusd4	92	61.613	Mola_mola
ENSAMXG00000031479	rpusd4	95	51.479	ENSMODG00000004521	RPUSD4	87	51.744	Monodelphis_domestica
ENSAMXG00000031479	rpusd4	86	62.951	ENSMALG00000005839	rpusd4	97	61.562	Monopterus_albus
ENSAMXG00000031479	rpusd4	94	50.595	MGP_CAROLIEiJ_G0031954	Rpusd4	92	49.167	Mus_caroli
ENSAMXG00000031479	rpusd4	94	50.298	ENSMUSG00000032044	Rpusd4	92	48.889	Mus_musculus
ENSAMXG00000031479	rpusd4	97	48.396	MGP_PahariEiJ_G0014819	Rpusd4	95	48.396	Mus_pahari
ENSAMXG00000031479	rpusd4	95	49.852	MGP_SPRETEiJ_G0033078	Rpusd4	91	49.138	Mus_spretus
ENSAMXG00000031479	rpusd4	92	51.376	ENSMPUG00000006608	RPUSD4	85	51.376	Mustela_putorius_furo
ENSAMXG00000031479	rpusd4	91	52.322	ENSMLUG00000017328	-	85	52.322	Myotis_lucifugus
ENSAMXG00000031479	rpusd4	72	51.172	ENSMLUG00000029348	-	99	51.172	Myotis_lucifugus
ENSAMXG00000031479	rpusd4	95	50.742	ENSNGAG00000020847	Rpusd4	92	49.162	Nannospalax_galili
ENSAMXG00000031479	rpusd4	92	63.222	ENSNBRG00000005207	rpusd4	98	60.694	Neolamprologus_brichardi
ENSAMXG00000031479	rpusd4	95	50.000	ENSNLEG00000007465	RPUSD4	96	47.268	Nomascus_leucogenys
ENSAMXG00000031479	rpusd4	99	50.992	ENSMEUG00000004370	RPUSD4	94	50.992	Notamacropus_eugenii
ENSAMXG00000031479	rpusd4	95	50.296	ENSODEG00000004577	RPUSD4	90	49.568	Octodon_degus
ENSAMXG00000031479	rpusd4	95	62.722	ENSONIG00000018879	rpusd4	92	62.029	Oreochromis_niloticus
ENSAMXG00000031479	rpusd4	82	51.186	ENSOANG00000007247	RPUSD4	97	50.163	Ornithorhynchus_anatinus
ENSAMXG00000031479	rpusd4	99	49.575	ENSOCUG00000017039	RPUSD4	92	49.575	Oryctolagus_cuniculus
ENSAMXG00000031479	rpusd4	100	56.986	ENSORLG00000002750	rpusd4	95	57.429	Oryzias_latipes
ENSAMXG00000031479	rpusd4	94	58.507	ENSORLG00020002044	rpusd4	83	58.507	Oryzias_latipes_hni
ENSAMXG00000031479	rpusd4	99	56.198	ENSORLG00015020034	rpusd4	90	56.198	Oryzias_latipes_hsok
ENSAMXG00000031479	rpusd4	92	60.123	ENSOMEG00000004861	rpusd4	84	57.514	Oryzias_melastigma
ENSAMXG00000031479	rpusd4	89	52.038	ENSOGAG00000008922	RPUSD4	84	52.038	Otolemur_garnettii
ENSAMXG00000031479	rpusd4	94	51.952	ENSOARG00000012238	RPUSD4	93	48.138	Ovis_aries
ENSAMXG00000031479	rpusd4	89	51.104	ENSPPAG00000042883	RPUSD4	84	48.703	Pan_paniscus
ENSAMXG00000031479	rpusd4	95	48.961	ENSPPRG00000003081	RPUSD4	88	48.961	Panthera_pardus
ENSAMXG00000031479	rpusd4	95	48.961	ENSPTIG00000012059	RPUSD4	86	51.645	Panthera_tigris_altaica
ENSAMXG00000031479	rpusd4	89	51.104	ENSPTRG00000004454	RPUSD4	88	49.408	Pan_troglodytes
ENSAMXG00000031479	rpusd4	95	48.968	ENSPANG00000015040	RPUSD4	90	48.563	Papio_anubis
ENSAMXG00000031479	rpusd4	93	65.854	ENSPKIG00000023986	rpusd4	83	65.854	Paramormyrops_kingsleyae
ENSAMXG00000031479	rpusd4	85	55.776	ENSPSIG00000014268	RPUSD4	96	55.776	Pelodiscus_sinensis
ENSAMXG00000031479	rpusd4	93	53.916	ENSPMGG00000002806	rpusd4	91	53.776	Periophthalmus_magnuspinnatus
ENSAMXG00000031479	rpusd4	96	41.813	ENSPEMG00000000278	Rpusd4	96	40.650	Peromyscus_maniculatus_bairdii
ENSAMXG00000031479	rpusd4	85	41.994	ENSPMAG00000008183	rpusd4	96	41.994	Petromyzon_marinus
ENSAMXG00000031479	rpusd4	89	55.063	ENSPCIG00000010212	RPUSD4	86	55.063	Phascolarctos_cinereus
ENSAMXG00000031479	rpusd4	95	57.771	ENSPFOG00000019030	rpusd4	89	57.771	Poecilia_formosa
ENSAMXG00000031479	rpusd4	95	58.702	ENSPLAG00000016848	rpusd4	86	58.702	Poecilia_latipinna
ENSAMXG00000031479	rpusd4	95	57.522	ENSPMEG00000017534	rpusd4	86	57.522	Poecilia_mexicana
ENSAMXG00000031479	rpusd4	91	57.716	ENSPREG00000005689	rpusd4	88	55.556	Poecilia_reticulata
ENSAMXG00000031479	rpusd4	91	50.769	ENSPPYG00000004043	RPUSD4	85	50.769	Pongo_abelii
ENSAMXG00000031479	rpusd4	75	54.494	ENSPCAG00000000753	RPUSD4	70	54.494	Procavia_capensis
ENSAMXG00000031479	rpusd4	95	48.368	ENSPCOG00000020694	RPUSD4	88	48.368	Propithecus_coquereli
ENSAMXG00000031479	rpusd4	94	50.448	ENSPVAG00000000988	RPUSD4	91	49.003	Pteropus_vampyrus
ENSAMXG00000031479	rpusd4	95	61.834	ENSPNYG00000009652	rpusd4	89	60.571	Pundamilia_nyererei
ENSAMXG00000031479	rpusd4	97	80.000	ENSPNAG00000012264	rpusd4	100	74.935	Pygocentrus_nattereri
ENSAMXG00000031479	rpusd4	95	49.555	ENSRNOG00000011567	Rpusd4	90	48.442	Rattus_norvegicus
ENSAMXG00000031479	rpusd4	94	49.555	ENSRBIG00000034842	RPUSD4	90	48.851	Rhinopithecus_bieti
ENSAMXG00000031479	rpusd4	94	49.555	ENSRROG00000039753	RPUSD4	90	48.851	Rhinopithecus_roxellana
ENSAMXG00000031479	rpusd4	95	48.961	ENSSBOG00000030413	RPUSD4	91	48.266	Saimiri_boliviensis_boliviensis
ENSAMXG00000031479	rpusd4	86	52.632	ENSSHAG00000008304	RPUSD4	99	52.632	Sarcophilus_harrisii
ENSAMXG00000031479	rpusd4	95	62.090	ENSSFOG00015006203	rpusd4	91	62.090	Scleropages_formosus
ENSAMXG00000031479	rpusd4	95	62.722	ENSSMAG00000020978	rpusd4	87	63.174	Scophthalmus_maximus
ENSAMXG00000031479	rpusd4	96	60.526	ENSSDUG00000013399	rpusd4	89	60.526	Seriola_dumerili
ENSAMXG00000031479	rpusd4	96	60.526	ENSSLDG00000023507	rpusd4	89	60.526	Seriola_lalandi_dorsalis
ENSAMXG00000031479	rpusd4	94	49.030	ENSSPUG00000001401	RPUSD4	98	49.451	Sphenodon_punctatus
ENSAMXG00000031479	rpusd4	95	61.765	ENSSPAG00000012163	rpusd4	86	61.765	Stegastes_partitus
ENSAMXG00000031479	rpusd4	94	51.343	ENSSSCG00000015233	RPUSD4	90	50.581	Sus_scrofa
ENSAMXG00000031479	rpusd4	84	52.667	ENSTGUG00000000773	RPUSD4	99	52.667	Taeniopygia_guttata
ENSAMXG00000031479	rpusd4	96	56.433	ENSTRUG00000012283	rpusd4	88	56.034	Takifugu_rubripes
ENSAMXG00000031479	rpusd4	94	57.270	ENSTNIG00000014676	rpusd4	85	57.270	Tetraodon_nigroviridis
ENSAMXG00000031479	rpusd4	95	49.852	ENSTTRG00000001555	RPUSD4	90	49.133	Tursiops_truncatus
ENSAMXG00000031479	rpusd4	99	50.852	ENSUMAG00000002219	RPUSD4	92	50.852	Ursus_maritimus
ENSAMXG00000031479	rpusd4	68	50.209	ENSVPAG00000001066	RPUSD4	100	46.863	Vicugna_pacos
ENSAMXG00000031479	rpusd4	85	53.795	ENSVVUG00000020101	RPUSD4	85	51.682	Vulpes_vulpes
ENSAMXG00000031479	rpusd4	98	56.980	ENSXCOG00000004676	rpusd4	88	58.160	Xiphophorus_couchianus
ENSAMXG00000031479	rpusd4	94	58.160	ENSXMAG00000023351	rpusd4	92	55.989	Xiphophorus_maculatus