EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000031648 (Gene tree)
Gene ID: 103041487
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 7-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 4898 bases
Position: chr17:14224273-14229170
Accession: 103041487
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000054905	RRM_1	PF00076.22	1.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000031432	-	981	XM_022679017	ENSAMXP00000054905	243 (aa)	XP_022534738	UPI000BBD7C53

Gene Model

Click here to download ENSAMXG00000031648's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03040	Spliceosome	KEGG
amex05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000031648's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000031648	-	72	72.159	ENSAMXG00000001532	srsf7a	67	71.676

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000031648	-	50	53.600	ENSAOCG00000021499	srsf7b	81	54.386	Amphiprion_ocellaris
ENSAMXG00000031648	-	50	53.600	ENSAPEG00000018802	srsf7b	81	54.386	Amphiprion_percula
ENSAMXG00000031648	-	53	50.388	ENSCCAG00000025870	-	92	50.345	Cebus_capucinus
ENSAMXG00000031648	-	56	83.704	ENSCSEG00000006378	srsf7a	81	89.474	Cynoglossus_semilaevis
ENSAMXG00000031648	-	52	80.952	ENSCVAG00000020083	srsf7a	69	69.061	Cyprinodon_variegatus
ENSAMXG00000031648	-	81	70.854	ENSDARG00000035325	srsf7a	84	93.443	Danio_rerio
ENSAMXG00000031648	-	58	53.247	ENSEBUG00000002677	-	90	52.414	Eptatretus_burgeri
ENSAMXG00000031648	-	64	72.611	ENSELUG00000016922	srsf7a	80	90.991	Esox_lucius
ENSAMXG00000031648	-	85	58.173	ENSELUG00000018155	srsf7b	83	72.174	Esox_lucius
ENSAMXG00000031648	-	53	83.846	ENSFHEG00000007159	srsf7a	61	87.719	Fundulus_heteroclitus
ENSAMXG00000031648	-	90	67.686	ENSGMOG00000002004	srsf7a	78	69.231	Gadus_morhua
ENSAMXG00000031648	-	53	66.923	ENSGAFG00000008856	srsf7b	81	72.566	Gambusia_affinis
ENSAMXG00000031648	-	64	45.513	ENSHBUG00000022402	-	51	68.235	Haplochromis_burtoni
ENSAMXG00000031648	-	94	83.843	ENSIPUG00000007928	-	93	84.141	Ictalurus_punctatus
ENSAMXG00000031648	-	55	54.815	ENSJJAG00000020230	-	69	58.772	Jaculus_jaculus
ENSAMXG00000031648	-	62	45.695	ENSMZEG00005016010	-	90	48.571	Maylandia_zebra
ENSAMXG00000031648	-	66	47.205	ENSMAUG00000011430	-	56	55.294	Mesocricetus_auratus
ENSAMXG00000031648	-	53	85.938	ENSMMOG00000005208	srsf7a	75	89.474	Mola_mola
ENSAMXG00000031648	-	62	45.695	ENSNBRG00000016360	-	82	48.571	Neolamprologus_brichardi
ENSAMXG00000031648	-	63	48.026	ENSNLEG00000030606	-	92	45.578	Nomascus_leucogenys
ENSAMXG00000031648	-	71	80.337	ENSPKIG00000008209	-	66	76.966	Paramormyrops_kingsleyae
ENSAMXG00000031648	-	68	66.265	ENSPKIG00000017425	srsf7b	65	76.522	Paramormyrops_kingsleyae
ENSAMXG00000031648	-	57	47.101	ENSPMGG00000004040	srsf3b	68	64.706	Periophthalmus_magnuspinnatus
ENSAMXG00000031648	-	51	48.780	ENSPEMG00000024099	-	90	47.183	Peromyscus_maniculatus_bairdii
ENSAMXG00000031648	-	51	65.873	ENSPMAG00000004472	srsf7a	89	57.714	Petromyzon_marinus
ENSAMXG00000031648	-	51	87.097	ENSPREG00000020685	srsf7a	89	87.719	Poecilia_reticulata
ENSAMXG00000031648	-	79	48.705	ENSPCOG00000025051	-	90	46.544	Propithecus_coquereli
ENSAMXG00000031648	-	52	58.955	ENSPCOG00000023721	-	72	67.826	Propithecus_coquereli
ENSAMXG00000031648	-	64	45.513	ENSPNYG00000013747	-	92	48.571	Pundamilia_nyererei
ENSAMXG00000031648	-	94	88.646	ENSPNAG00000000149	-	93	91.630	Pygocentrus_nattereri
ENSAMXG00000031648	-	70	57.647	ENSRNOG00000008398	AABR07055789.1	69	68.421	Rattus_norvegicus
ENSAMXG00000031648	-	76	80.319	ENSSFOG00015006796	-	72	84.746	Scleropages_formosus
ENSAMXG00000031648	-	51	70.161	ENSSDUG00000021338	srsf7b	80	73.043	Seriola_dumerili
ENSAMXG00000031648	-	51	88.000	ENSSPAG00000022192	srsf7a	90	89.474	Stegastes_partitus
ENSAMXG00000031648	-	52	52.756	ENSTRUG00000023965	-	91	47.674	Takifugu_rubripes
ENSAMXG00000031648	-	52	52.756	ENSTNIG00000001003	-	91	47.674	Tetraodon_nigroviridis
ENSAMXG00000031648	-	59	54.422	ENSVVUG00000006092	-	69	62.500	Vulpes_vulpes
ENSAMXG00000031648	-	51	86.179	ENSXCOG00000009381	srsf7a	89	86.842	Xiphophorus_couchianus