EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000031679 (Gene tree)
Gene ID: 103032065
Gene Symbol: trub2
Alias: fc51e05|wu:fc51e05|zgc:91836
Full Name: TruB pseudouridine synthase family member 2
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 5496 bases
Position: chr13:35616589-35622084
Accession: 103032065
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000040677	TruB_N	PF01509.18	3.7e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000057496	-	3358	XM_022675725	ENSAMXP00000040677	350 (aa)	XP_022531446	UPI000BBDA29E

Gene Model

Click here to download ENSAMXG00000031679's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000031679's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000031679	trub2	55	31.088	ENSAMXG00000015845	trub1	63	31.088

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000031679	trub2	80	57.857	ENSG00000167112	TRUB2	84	57.857	Homo_sapiens
ENSAMXG00000031679	trub2	92	45.092	ENSAPOG00000018284	-	94	55.747	Acanthochromis_polyacanthus
ENSAMXG00000031679	trub2	69	62.810	ENSAPOG00000015733	trub2	87	62.810	Acanthochromis_polyacanthus
ENSAMXG00000031679	trub2	81	56.338	ENSAMEG00000015395	TRUB2	85	56.338	Ailuropoda_melanoleuca
ENSAMXG00000031679	trub2	83	62.759	ENSACIG00000016500	trub2	90	61.873	Amphilophus_citrinellus
ENSAMXG00000031679	trub2	86	62.706	ENSAOCG00000002330	trub2	89	62.706	Amphiprion_ocellaris
ENSAMXG00000031679	trub2	91	61.250	ENSAPEG00000013177	trub2	94	61.250	Amphiprion_percula
ENSAMXG00000031679	trub2	87	61.812	ENSATEG00000011371	trub2	97	61.812	Anabas_testudineus
ENSAMXG00000031679	trub2	81	50.530	ENSAPLG00000009254	TRUB2	92	50.530	Anas_platyrhynchos
ENSAMXG00000031679	trub2	91	51.258	ENSACAG00000007331	TRUB2	95	51.258	Anolis_carolinensis
ENSAMXG00000031679	trub2	80	58.214	ENSANAG00000036234	TRUB2	90	58.214	Aotus_nancymaae
ENSAMXG00000031679	trub2	92	57.055	ENSACLG00000010793	trub2	98	57.055	Astatotilapia_calliptera
ENSAMXG00000031679	trub2	80	56.786	ENSCJAG00000020009	TRUB2	84	56.786	Callithrix_jacchus
ENSAMXG00000031679	trub2	80	56.786	ENSCAFG00000020068	TRUB2	85	56.786	Canis_familiaris
ENSAMXG00000031679	trub2	80	56.071	ENSCHIG00000021160	TRUB2	84	56.071	Capra_hircus
ENSAMXG00000031679	trub2	91	52.516	ENSTSYG00000034163	TRUB2	96	52.516	Carlito_syrichta
ENSAMXG00000031679	trub2	81	50.877	ENSCAPG00000000223	TRUB2	96	50.877	Cavia_aperea
ENSAMXG00000031679	trub2	90	51.420	ENSCPOG00000013535	TRUB2	95	51.420	Cavia_porcellus
ENSAMXG00000031679	trub2	80	57.500	ENSCCAG00000026531	-	85	57.500	Cebus_capucinus
ENSAMXG00000031679	trub2	80	54.839	ENSCCAG00000028463	-	98	50.459	Cebus_capucinus
ENSAMXG00000031679	trub2	80	57.857	ENSCATG00000038234	TRUB2	84	57.857	Cercocebus_atys
ENSAMXG00000031679	trub2	86	54.455	ENSCLAG00000001702	TRUB2	92	54.455	Chinchilla_lanigera
ENSAMXG00000031679	trub2	80	54.225	ENSCSAG00000014117	TRUB2	84	54.225	Chlorocebus_sabaeus
ENSAMXG00000031679	trub2	90	51.420	ENSCHOG00000001555	TRUB2	95	51.420	Choloepus_hoffmanni
ENSAMXG00000031679	trub2	82	55.052	ENSCPBG00000025186	TRUB2	84	55.052	Chrysemys_picta_bellii
ENSAMXG00000031679	trub2	82	35.959	ENSCSAVG00000003930	-	89	35.959	Ciona_savignyi
ENSAMXG00000031679	trub2	80	51.429	ENSCANG00000016135	TRUB2	83	51.429	Colobus_angolensis_palliatus
ENSAMXG00000031679	trub2	80	55.714	ENSCGRG00001024441	Trub2	92	52.601	Cricetulus_griseus_chok1gshd
ENSAMXG00000031679	trub2	80	55.714	ENSCGRG00000005633	Trub2	84	55.714	Cricetulus_griseus_crigri
ENSAMXG00000031679	trub2	86	58.416	ENSCSEG00000001331	trub2	90	58.416	Cynoglossus_semilaevis
ENSAMXG00000031679	trub2	94	55.120	ENSCVAG00000009901	trub2	99	55.120	Cyprinodon_variegatus
ENSAMXG00000031679	trub2	91	67.702	ENSDARG00000028379	trub2	91	67.702	Danio_rerio
ENSAMXG00000031679	trub2	80	55.556	ENSDNOG00000045679	-	84	55.556	Dasypus_novemcinctus
ENSAMXG00000031679	trub2	70	39.200	ENSDNOG00000043967	-	75	39.200	Dasypus_novemcinctus
ENSAMXG00000031679	trub2	93	51.682	ENSDORG00000016222	Trub2	98	51.682	Dipodomys_ordii
ENSAMXG00000031679	trub2	83	33.898	FBgn0033060	CG7849	92	33.898	Drosophila_melanogaster
ENSAMXG00000031679	trub2	80	56.429	ENSETEG00000009114	TRUB2	86	56.429	Echinops_telfairi
ENSAMXG00000031679	trub2	62	50.000	ENSEBUG00000015723	trub2	80	50.000	Eptatretus_burgeri
ENSAMXG00000031679	trub2	80	57.500	ENSEASG00005016819	TRUB2	84	57.500	Equus_asinus_asinus
ENSAMXG00000031679	trub2	80	57.143	ENSECAG00000023520	TRUB2	84	57.143	Equus_caballus
ENSAMXG00000031679	trub2	89	51.899	ENSEEUG00000008908	TRUB2	96	51.899	Erinaceus_europaeus
ENSAMXG00000031679	trub2	86	62.540	ENSELUG00000002376	trub2	98	62.540	Esox_lucius
ENSAMXG00000031679	trub2	80	58.214	ENSFCAG00000005839	TRUB2	87	58.214	Felis_catus
ENSAMXG00000031679	trub2	71	53.200	ENSFALG00000001364	TRUB2	80	53.200	Ficedula_albicollis
ENSAMXG00000031679	trub2	80	57.500	ENSFDAG00000021374	TRUB2	89	54.913	Fukomys_damarensis
ENSAMXG00000031679	trub2	91	52.188	ENSFHEG00000014655	trub2	95	52.188	Fundulus_heteroclitus
ENSAMXG00000031679	trub2	85	52.349	ENSGMOG00000000981	trub2	100	52.349	Gadus_morhua
ENSAMXG00000031679	trub2	79	52.727	ENSGALG00000004920	TRUB2	67	52.727	Gallus_gallus
ENSAMXG00000031679	trub2	82	62.847	ENSGAFG00000010107	trub2	97	57.407	Gambusia_affinis
ENSAMXG00000031679	trub2	85	62.876	ENSGACG00000001476	trub2	90	62.876	Gasterosteus_aculeatus
ENSAMXG00000031679	trub2	81	57.092	ENSGAGG00000022872	TRUB2	83	57.092	Gopherus_agassizii
ENSAMXG00000031679	trub2	80	57.143	ENSGGOG00000014780	TRUB2	84	57.143	Gorilla_gorilla
ENSAMXG00000031679	trub2	92	57.362	ENSHBUG00000022384	trub2	98	57.362	Haplochromis_burtoni
ENSAMXG00000031679	trub2	83	55.290	ENSHGLG00000016715	TRUB2	88	55.290	Heterocephalus_glaber_female
ENSAMXG00000031679	trub2	83	55.290	ENSHGLG00100016548	TRUB2	88	55.290	Heterocephalus_glaber_male
ENSAMXG00000031679	trub2	93	59.327	ENSHCOG00000017748	trub2	98	59.327	Hippocampus_comes
ENSAMXG00000031679	trub2	93	73.846	ENSIPUG00000017725	hdhd3	57	73.846	Ictalurus_punctatus
ENSAMXG00000031679	trub2	87	51.803	ENSSTOG00000022617	-	93	51.803	Ictidomys_tridecemlineatus
ENSAMXG00000031679	trub2	80	55.000	ENSSTOG00000008024	-	92	51.111	Ictidomys_tridecemlineatus
ENSAMXG00000031679	trub2	88	48.065	ENSJJAG00000019181	Trub2	93	48.065	Jaculus_jaculus
ENSAMXG00000031679	trub2	85	62.542	ENSKMAG00000007861	trub2	89	62.542	Kryptolebias_marmoratus
ENSAMXG00000031679	trub2	86	60.465	ENSLBEG00000000907	trub2	88	60.465	Labrus_bergylta
ENSAMXG00000031679	trub2	91	50.625	ENSLACG00000001515	TRUB2	95	50.625	Latimeria_chalumnae
ENSAMXG00000031679	trub2	82	64.236	ENSLOCG00000000885	trub2	95	64.236	Lepisosteus_oculatus
ENSAMXG00000031679	trub2	80	55.714	ENSLAFG00000002174	TRUB2	92	55.714	Loxodonta_africana
ENSAMXG00000031679	trub2	80	57.500	ENSMFAG00000000881	TRUB2	84	57.500	Macaca_fascicularis
ENSAMXG00000031679	trub2	80	57.500	ENSMMUG00000014146	TRUB2	84	57.500	Macaca_mulatta
ENSAMXG00000031679	trub2	80	57.500	ENSMNEG00000011189	TRUB2	84	57.500	Macaca_nemestrina
ENSAMXG00000031679	trub2	80	57.500	ENSMLEG00000037270	TRUB2	84	57.500	Mandrillus_leucophaeus
ENSAMXG00000031679	trub2	86	61.794	ENSMAMG00000023643	trub2	99	61.794	Mastacembelus_armatus
ENSAMXG00000031679	trub2	92	57.362	ENSMZEG00005016018	trub2	98	57.362	Maylandia_zebra
ENSAMXG00000031679	trub2	52	56.831	ENSMGAG00000003894	TRUB2	92	56.831	Meleagris_gallopavo
ENSAMXG00000031679	trub2	88	52.922	ENSMAUG00000010403	Trub2	96	51.596	Mesocricetus_auratus
ENSAMXG00000031679	trub2	80	57.143	ENSMICG00000047032	TRUB2	84	57.143	Microcebus_murinus
ENSAMXG00000031679	trub2	83	53.925	ENSMOCG00000014291	Trub2	96	53.925	Microtus_ochrogaster
ENSAMXG00000031679	trub2	93	56.707	ENSMMOG00000021674	trub2	99	56.707	Mola_mola
ENSAMXG00000031679	trub2	80	55.914	ENSMODG00000005940	TRUB2	94	55.914	Monodelphis_domestica
ENSAMXG00000031679	trub2	92	56.535	ENSMALG00000021231	trub2	97	56.535	Monopterus_albus
ENSAMXG00000031679	trub2	88	53.571	MGP_CAROLIEiJ_G0023368	Trub2	96	51.064	Mus_caroli
ENSAMXG00000031679	trub2	88	52.922	ENSMUSG00000039826	Trub2	96	50.000	Mus_musculus
ENSAMXG00000031679	trub2	88	53.571	MGP_PahariEiJ_G0024826	Trub2	93	53.571	Mus_pahari
ENSAMXG00000031679	trub2	88	52.597	MGP_SPRETEiJ_G0024286	Trub2	96	50.000	Mus_spretus
ENSAMXG00000031679	trub2	81	54.930	ENSMPUG00000013206	TRUB2	78	54.930	Mustela_putorius_furo
ENSAMXG00000031679	trub2	86	54.455	ENSMLUG00000005256	TRUB2	91	54.455	Myotis_lucifugus
ENSAMXG00000031679	trub2	80	55.357	ENSNGAG00000018679	Trub2	85	55.357	Nannospalax_galili
ENSAMXG00000031679	trub2	92	58.716	ENSNBRG00000016294	trub2	98	58.716	Neolamprologus_brichardi
ENSAMXG00000031679	trub2	91	53.416	ENSNLEG00000017556	TRUB2	97	53.416	Nomascus_leucogenys
ENSAMXG00000031679	trub2	76	58.801	ENSMEUG00000000484	TRUB2	86	58.801	Notamacropus_eugenii
ENSAMXG00000031679	trub2	90	50.158	ENSOPRG00000001981	TRUB2	96	50.158	Ochotona_princeps
ENSAMXG00000031679	trub2	80	56.429	ENSODEG00000017292	TRUB2	93	50.811	Octodon_degus
ENSAMXG00000031679	trub2	92	57.669	ENSONIG00000004230	trub2	98	57.669	Oreochromis_niloticus
ENSAMXG00000031679	trub2	54	56.085	ENSOANG00000029023	-	84	56.085	Ornithorhynchus_anatinus
ENSAMXG00000031679	trub2	94	51.976	ENSOCUG00000026296	TRUB2	89	51.976	Oryctolagus_cuniculus
ENSAMXG00000031679	trub2	88	59.807	ENSORLG00000020011	trub2	94	59.807	Oryzias_latipes
ENSAMXG00000031679	trub2	86	60.197	ENSORLG00020011028	trub2	89	60.197	Oryzias_latipes_hni
ENSAMXG00000031679	trub2	86	59.868	ENSORLG00015007494	trub2	93	60.526	Oryzias_latipes_hsok
ENSAMXG00000031679	trub2	90	60.952	ENSOMEG00000006702	trub2	95	60.952	Oryzias_melastigma
ENSAMXG00000031679	trub2	80	57.143	ENSOARG00000010579	-	84	57.143	Ovis_aries
ENSAMXG00000031679	trub2	56	57.436	ENSOARG00000003785	-	81	55.610	Ovis_aries
ENSAMXG00000031679	trub2	80	57.857	ENSPPAG00000043146	TRUB2	84	57.857	Pan_paniscus
ENSAMXG00000031679	trub2	80	58.214	ENSPPRG00000006307	TRUB2	87	58.214	Panthera_pardus
ENSAMXG00000031679	trub2	80	58.571	ENSPTIG00000012366	TRUB2	87	58.571	Panthera_tigris_altaica
ENSAMXG00000031679	trub2	80	57.500	ENSPTRG00000052151	-	84	57.500	Pan_troglodytes
ENSAMXG00000031679	trub2	80	57.500	ENSPTRG00000021423	TRUB2	84	57.500	Pan_troglodytes
ENSAMXG00000031679	trub2	80	57.500	ENSPANG00000025856	TRUB2	84	57.500	Papio_anubis
ENSAMXG00000031679	trub2	82	64.460	ENSPKIG00000019769	trub2	94	64.460	Paramormyrops_kingsleyae
ENSAMXG00000031679	trub2	80	52.688	ENSPSIG00000015701	TRUB2	93	52.688	Pelodiscus_sinensis
ENSAMXG00000031679	trub2	83	59.864	ENSPMGG00000010206	trub2	92	59.864	Periophthalmus_magnuspinnatus
ENSAMXG00000031679	trub2	83	54.422	ENSPEMG00000017893	Trub2	93	52.299	Peromyscus_maniculatus_bairdii
ENSAMXG00000031679	trub2	79	57.401	ENSPCIG00000026731	TRUB2	89	57.401	Phascolarctos_cinereus
ENSAMXG00000031679	trub2	81	63.251	ENSPFOG00000018018	trub2	78	61.695	Poecilia_formosa
ENSAMXG00000031679	trub2	81	62.898	ENSPLAG00000010484	trub2	85	61.356	Poecilia_latipinna
ENSAMXG00000031679	trub2	89	59.486	ENSPMEG00000012913	trub2	91	59.486	Poecilia_mexicana
ENSAMXG00000031679	trub2	82	62.847	ENSPREG00000002549	trub2	89	60.927	Poecilia_reticulata
ENSAMXG00000031679	trub2	80	56.786	ENSPPYG00000019650	TRUB2	86	56.786	Pongo_abelii
ENSAMXG00000031679	trub2	80	56.631	ENSPCAG00000015068	TRUB2	85	56.631	Procavia_capensis
ENSAMXG00000031679	trub2	80	57.143	ENSPCOG00000017100	TRUB2	84	57.143	Propithecus_coquereli
ENSAMXG00000031679	trub2	74	55.385	ENSPVAG00000001224	TRUB2	87	55.385	Pteropus_vampyrus
ENSAMXG00000031679	trub2	92	57.362	ENSPNYG00000013666	trub2	98	57.362	Pundamilia_nyererei
ENSAMXG00000031679	trub2	99	81.766	ENSPNAG00000017292	trub2	99	81.766	Pygocentrus_nattereri
ENSAMXG00000031679	trub2	84	54.237	ENSRNOG00000043189	Trub2	91	54.237	Rattus_norvegicus
ENSAMXG00000031679	trub2	80	51.786	ENSRBIG00000006965	TRUB2	83	51.786	Rhinopithecus_bieti
ENSAMXG00000031679	trub2	80	57.143	ENSRROG00000042928	TRUB2	84	57.143	Rhinopithecus_roxellana
ENSAMXG00000031679	trub2	80	55.714	ENSSBOG00000022439	TRUB2	84	55.714	Saimiri_boliviensis_boliviensis
ENSAMXG00000031679	trub2	82	67.596	ENSSFOG00015013391	trub2	92	67.596	Scleropages_formosus
ENSAMXG00000031679	trub2	93	56.135	ENSSMAG00000020820	trub2	99	56.135	Scophthalmus_maximus
ENSAMXG00000031679	trub2	92	57.055	ENSSDUG00000016928	trub2	97	57.055	Seriola_dumerili
ENSAMXG00000031679	trub2	83	61.168	ENSSLDG00000024701	trub2	99	56.024	Seriola_lalandi_dorsalis
ENSAMXG00000031679	trub2	81	54.610	ENSSPUG00000015515	TRUB2	84	54.610	Sphenodon_punctatus
ENSAMXG00000031679	trub2	94	61.515	ENSSPAG00000017865	trub2	98	61.515	Stegastes_partitus
ENSAMXG00000031679	trub2	80	56.429	ENSSSCG00000005645	TRUB2	84	55.823	Sus_scrofa
ENSAMXG00000031679	trub2	71	54.032	ENSTGUG00000003704	TRUB2	94	54.032	Taeniopygia_guttata
ENSAMXG00000031679	trub2	85	58.784	ENSTRUG00000015499	trub2	91	58.784	Takifugu_rubripes
ENSAMXG00000031679	trub2	83	61.034	ENSTNIG00000014721	trub2	99	61.034	Tetraodon_nigroviridis
ENSAMXG00000031679	trub2	51	53.371	ENSTBEG00000000586	TRUB2	79	53.371	Tupaia_belangeri
ENSAMXG00000031679	trub2	83	51.877	ENSTTRG00000016486	TRUB2	88	51.877	Tursiops_truncatus
ENSAMXG00000031679	trub2	81	55.634	ENSUAMG00000020276	TRUB2	83	55.634	Ursus_americanus
ENSAMXG00000031679	trub2	81	55.986	ENSUMAG00000022051	TRUB2	83	55.986	Ursus_maritimus
ENSAMXG00000031679	trub2	80	41.429	ENSVPAG00000005793	TRUB2	88	41.429	Vicugna_pacos
ENSAMXG00000031679	trub2	80	56.786	ENSVVUG00000013451	TRUB2	80	56.786	Vulpes_vulpes
ENSAMXG00000031679	trub2	87	56.536	ENSXETG00000003973	trub2	94	56.536	Xenopus_tropicalis
ENSAMXG00000031679	trub2	83	61.856	ENSXCOG00000008759	trub2	89	60.596	Xiphophorus_couchianus
ENSAMXG00000031679	trub2	83	61.856	ENSXMAG00000015478	trub2	89	60.596	Xiphophorus_maculatus