EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000031771 (Gene tree)
Gene ID: 103034622
Gene Symbol: arl5c
Alias: zgc:77751
Full Name: ADP-ribosylation factor-like protein 5B
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 10024 bases
Position: chr2:4151814-4161837
Accession: 103034622
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000042807	MMR_HSR1	PF01926.23	9.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000047033	-	4023	XM_022672330	ENSAMXP00000042807	179 (aa)	XP_022528051	UPI000BBDC9DE

Gene Model

Click here to download ENSAMXG00000031771's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000031771's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000031771	arl5c	62	32.479	ENSAMXG00000040604	-	57	32.479
ENSAMXG00000031771	arl5c	54	31.373	ENSAMXG00000038243	si:dkey-16l2.16	81	31.373
ENSAMXG00000031771	arl5c	98	49.153	ENSAMXG00000035742	arf2a	98	49.153
ENSAMXG00000031771	arl5c	94	47.929	ENSAMXG00000031774	ARF5	92	47.929
ENSAMXG00000031771	arl5c	98	35.165	ENSAMXG00000035902	ARL6	97	35.165
ENSAMXG00000031771	arl5c	89	41.566	ENSAMXG00000025423	arl4ab	87	41.566
ENSAMXG00000031771	arl5c	98	48.023	ENSAMXG00000016434	arf3a	78	48.023
ENSAMXG00000031771	arl5c	87	30.625	ENSAMXG00000039062	arl8a	84	30.625
ENSAMXG00000031771	arl5c	98	49.432	ENSAMXG00000019845	arf1	98	49.432
ENSAMXG00000031771	arl5c	97	36.932	ENSAMXG00000019160	arl3l1	94	36.932
ENSAMXG00000031771	arl5c	99	39.665	ENSAMXG00000037720	arl3	98	39.665
ENSAMXG00000031771	arl5c	92	38.415	ENSAMXG00000018516	arl3l2	88	38.415
ENSAMXG00000031771	arl5c	96	46.821	ENSAMXG00000038224	-	96	46.821
ENSAMXG00000031771	arl5c	98	44.633	ENSAMXG00000031467	arf4a	98	44.633
ENSAMXG00000031771	arl5c	98	73.864	ENSAMXG00000010445	arl8	98	73.864
ENSAMXG00000031771	arl5c	94	37.059	ENSAMXG00000012281	arl11	94	37.059
ENSAMXG00000031771	arl5c	99	40.223	ENSAMXG00000043381	zgc:110197	98	40.223
ENSAMXG00000031771	arl5c	96	46.821	ENSAMXG00000004249	-	96	46.821
ENSAMXG00000031771	arl5c	85	44.516	ENSAMXG00000024897	-	82	44.516
ENSAMXG00000031771	arl5c	85	41.139	ENSAMXG00000006638	arl4aa	79	41.139
ENSAMXG00000031771	arl5c	64	32.231	ENSAMXG00000039865	rab35b	59	32.231
ENSAMXG00000031771	arl5c	89	38.994	ENSAMXG00000034370	-	87	38.994
ENSAMXG00000031771	arl5c	99	37.640	ENSAMXG00000011499	arl2	97	37.640
ENSAMXG00000031771	arl5c	57	30.769	ENSAMXG00000018108	sar1b	75	30.769
ENSAMXG00000031771	arl5c	98	48.023	ENSAMXG00000037485	arf2b	98	48.023
ENSAMXG00000031771	arl5c	94	39.665	ENSAMXG00000042798	arfrp1	89	39.665
ENSAMXG00000031771	arl5c	96	46.821	ENSAMXG00000021056	arl1	96	46.821
ENSAMXG00000031771	arl5c	89	43.636	ENSAMXG00000024926	arl4cb	86	43.636
ENSAMXG00000031771	arl5c	69	30.469	ENSAMXG00000013054	rab22a	64	30.469
ENSAMXG00000031771	arl5c	98	69.318	ENSAMXG00000011059	arl5a	98	69.318
ENSAMXG00000031771	arl5c	59	30.556	ENSAMXG00000012438	tysnd1	89	30.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000031771	arl5c	100	81.564	ENSAPOG00000005821	arl5c	100	81.564	Acanthochromis_polyacanthus
ENSAMXG00000031771	arl5c	99	81.564	ENSACIG00000008975	arl5c	99	81.564	Amphilophus_citrinellus
ENSAMXG00000031771	arl5c	100	82.682	ENSAOCG00000010448	arl5c	100	82.682	Amphiprion_ocellaris
ENSAMXG00000031771	arl5c	100	82.682	ENSAPEG00000002699	arl5c	100	82.682	Amphiprion_percula
ENSAMXG00000031771	arl5c	100	80.447	ENSATEG00000000181	arl5c	100	80.447	Anabas_testudineus
ENSAMXG00000031771	arl5c	100	84.358	ENSACLG00000000922	arl5c	100	84.358	Astatotilapia_calliptera
ENSAMXG00000031771	arl5c	100	80.447	ENSCSEG00000009845	arl5c	100	80.447	Cynoglossus_semilaevis
ENSAMXG00000031771	arl5c	100	82.123	ENSCVAG00000012706	arl5c	100	82.123	Cyprinodon_variegatus
ENSAMXG00000031771	arl5c	100	90.503	ENSDARG00000035719	arl5c	100	90.503	Danio_rerio
ENSAMXG00000031771	arl5c	100	89.944	ENSELUG00000016864	arl5c	100	89.944	Esox_lucius
ENSAMXG00000031771	arl5c	100	82.682	ENSFHEG00000013677	arl5c	100	82.682	Fundulus_heteroclitus
ENSAMXG00000031771	arl5c	100	82.123	ENSGAFG00000002547	arl5c	100	82.123	Gambusia_affinis
ENSAMXG00000031771	arl5c	100	83.799	ENSGACG00000009321	arl5c	100	83.799	Gasterosteus_aculeatus
ENSAMXG00000031771	arl5c	100	84.358	ENSHBUG00000007301	arl5c	100	84.358	Haplochromis_burtoni
ENSAMXG00000031771	arl5c	100	77.095	ENSHCOG00000017576	-	100	77.095	Hippocampus_comes
ENSAMXG00000031771	arl5c	100	92.737	ENSIPUG00000023232	arl5c	100	92.737	Ictalurus_punctatus
ENSAMXG00000031771	arl5c	100	83.240	ENSKMAG00000011323	arl5c	100	83.240	Kryptolebias_marmoratus
ENSAMXG00000031771	arl5c	100	82.123	ENSLBEG00000006177	arl5c	86	82.123	Labrus_bergylta
ENSAMXG00000031771	arl5c	100	83.799	ENSMAMG00000022157	arl5c	100	83.799	Mastacembelus_armatus
ENSAMXG00000031771	arl5c	100	84.358	ENSMZEG00005022925	arl5c	100	84.358	Maylandia_zebra
ENSAMXG00000031771	arl5c	92	87.195	ENSMMOG00000020851	arl5c	96	87.195	Mola_mola
ENSAMXG00000031771	arl5c	99	80.337	ENSMALG00000009306	arl5c	99	80.337	Monopterus_albus
ENSAMXG00000031771	arl5c	100	84.358	ENSNBRG00000020245	arl5c	100	84.358	Neolamprologus_brichardi
ENSAMXG00000031771	arl5c	100	83.799	ENSONIG00000000890	arl5c	99	83.799	Oreochromis_niloticus
ENSAMXG00000031771	arl5c	100	77.654	ENSORLG00000002960	arl5c	100	78.659	Oryzias_latipes
ENSAMXG00000031771	arl5c	100	77.654	ENSORLG00020010074	arl5c	100	78.659	Oryzias_latipes_hni
ENSAMXG00000031771	arl5c	100	77.654	ENSORLG00015002752	arl5c	100	78.659	Oryzias_latipes_hsok
ENSAMXG00000031771	arl5c	97	80.347	ENSOMEG00000021718	arl5c	98	80.347	Oryzias_melastigma
ENSAMXG00000031771	arl5c	100	86.592	ENSPKIG00000021727	arl5c	100	86.592	Paramormyrops_kingsleyae
ENSAMXG00000031771	arl5c	100	83.240	ENSPFOG00000007842	arl5c	99	83.240	Poecilia_formosa
ENSAMXG00000031771	arl5c	100	82.682	ENSPLAG00000002394	arl5c	100	82.682	Poecilia_latipinna
ENSAMXG00000031771	arl5c	91	85.890	ENSPMEG00000000631	arl5c	94	85.890	Poecilia_mexicana
ENSAMXG00000031771	arl5c	100	83.799	ENSPREG00000008730	arl5c	100	83.799	Poecilia_reticulata
ENSAMXG00000031771	arl5c	100	84.358	ENSPNYG00000012720	arl5c	100	84.358	Pundamilia_nyererei
ENSAMXG00000031771	arl5c	100	93.296	ENSPNAG00000002310	arl5c	100	93.296	Pygocentrus_nattereri
ENSAMXG00000031771	arl5c	100	87.709	ENSSFOG00015023529	arl5c	100	87.709	Scleropages_formosus
ENSAMXG00000031771	arl5c	100	83.240	ENSSMAG00000010552	arl5c	100	83.240	Scophthalmus_maximus
ENSAMXG00000031771	arl5c	100	83.240	ENSSDUG00000022640	arl5c	100	83.240	Seriola_dumerili
ENSAMXG00000031771	arl5c	100	83.240	ENSSLDG00000000728	arl5c	100	83.240	Seriola_lalandi_dorsalis
ENSAMXG00000031771	arl5c	100	82.123	ENSSPAG00000007687	arl5c	100	82.123	Stegastes_partitus
ENSAMXG00000031771	arl5c	100	83.799	ENSTRUG00000022814	arl5c	100	83.799	Takifugu_rubripes
ENSAMXG00000031771	arl5c	100	80.447	ENSTNIG00000003015	arl5c	99	80.447	Tetraodon_nigroviridis
ENSAMXG00000031771	arl5c	100	82.123	ENSXCOG00000017380	arl5c	100	82.123	Xiphophorus_couchianus
ENSAMXG00000031771	arl5c	100	81.564	ENSXMAG00000008447	arl5c	100	81.564	Xiphophorus_maculatus