EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000031892 (Gene tree)
Gene ID: 103046645
Gene Symbol: -
Alias: -
Full Name: EH domain-containing protein 1-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 73848 bases
Position: chr20:12006649-12080496
Accession: 103046645
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000042034	MMR_HSR1	PF01926.23	4.9e-09	1	1
ENSAMXP00000039077	MMR_HSR1	PF01926.23	4.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000057556	-	1602	-	ENSAMXP00000039077	533 (aa)	-	-
ENSAMXT00000033237	-	4200	XM_022681063	ENSAMXP00000042034	532 (aa)	XP_022536784	UPI000BBDF121

Gene Model

Click here to download ENSAMXG00000031892's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000031892's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000031892	-	99	75.000	ENSAMXG00000008348	ehd4	98	74.719
ENSAMXG00000031892	-	97	64.491	ENSAMXG00000013748	ehd2a	94	64.672
ENSAMXG00000031892	-	100	84.211	ENSAMXG00000039344	ehd1a	99	84.211
ENSAMXG00000031892	-	72	30.730	ENSAMXG00000038693	SRL	87	30.730
ENSAMXG00000031892	-	74	31.220	ENSAMXG00000018789	srl	81	30.332
ENSAMXG00000031892	-	99	79.599	ENSAMXG00000042972	ehd3	99	79.599

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000031892	-	100	83.333	ENSG00000110047	EHD1	100	90.123	Homo_sapiens
ENSAMXG00000031892	-	98	87.308	ENSAPOG00000013440	ehd1a	98	87.308	Acanthochromis_polyacanthus
ENSAMXG00000031892	-	100	82.584	ENSAMEG00000017785	EHD1	96	82.584	Ailuropoda_melanoleuca
ENSAMXG00000031892	-	98	86.450	ENSACIG00000022182	ehd1a	99	86.450	Amphilophus_citrinellus
ENSAMXG00000031892	-	98	87.308	ENSAOCG00000016322	ehd1a	98	87.308	Amphiprion_ocellaris
ENSAMXG00000031892	-	98	87.308	ENSAPEG00000010363	ehd1a	98	87.308	Amphiprion_percula
ENSAMXG00000031892	-	98	86.832	ENSATEG00000013980	ehd1a	98	86.832	Anabas_testudineus
ENSAMXG00000031892	-	100	83.333	ENSANAG00000034810	EHD1	100	83.333	Aotus_nancymaae
ENSAMXG00000031892	-	98	86.069	ENSACLG00000016016	ehd1a	99	86.069	Astatotilapia_calliptera
ENSAMXG00000031892	-	100	83.333	ENSBTAG00000050712	EHD1	100	83.333	Bos_taurus
ENSAMXG00000031892	-	100	65.498	WBGene00004373	rme-1	98	65.498	Caenorhabditis_elegans
ENSAMXG00000031892	-	100	83.146	ENSCJAG00000002660	EHD1	100	83.146	Callithrix_jacchus
ENSAMXG00000031892	-	80	84.198	ENSCAFG00000014128	EHD1	92	83.871	Canis_familiaris
ENSAMXG00000031892	-	100	83.146	ENSCAFG00020014846	EHD1	100	83.146	Canis_lupus_dingo
ENSAMXG00000031892	-	100	83.333	ENSCHIG00000020707	-	100	83.333	Capra_hircus
ENSAMXG00000031892	-	100	83.146	ENSCPOG00000008157	EHD1	100	83.146	Cavia_porcellus
ENSAMXG00000031892	-	100	83.333	ENSCCAG00000004590	EHD1	100	83.333	Cebus_capucinus
ENSAMXG00000031892	-	100	83.333	ENSCATG00000010658	EHD1	97	84.055	Cercocebus_atys
ENSAMXG00000031892	-	100	83.146	ENSCLAG00000016412	EHD1	100	83.146	Chinchilla_lanigera
ENSAMXG00000031892	-	100	83.333	ENSCSAG00000007397	EHD1	100	83.333	Chlorocebus_sabaeus
ENSAMXG00000031892	-	99	82.609	ENSCPBG00000023692	EHD1	98	82.609	Chrysemys_picta_bellii
ENSAMXG00000031892	-	100	83.333	ENSCANG00000042123	EHD1	100	83.333	Colobus_angolensis_palliatus
ENSAMXG00000031892	-	100	82.959	ENSCGRG00001019701	Ehd1	100	82.959	Cricetulus_griseus_chok1gshd
ENSAMXG00000031892	-	94	83.200	ENSCGRG00000000662	Ehd1	99	83.200	Cricetulus_griseus_crigri
ENSAMXG00000031892	-	98	85.687	ENSCSEG00000006078	ehd1a	99	85.687	Cynoglossus_semilaevis
ENSAMXG00000031892	-	98	85.878	ENSCVAG00000012152	ehd1a	98	85.878	Cyprinodon_variegatus
ENSAMXG00000031892	-	100	89.286	ENSDARG00000014793	ehd1b	100	89.286	Danio_rerio
ENSAMXG00000031892	-	100	84.962	ENSDARG00000098853	ehd1a	99	85.255	Danio_rerio
ENSAMXG00000031892	-	67	86.667	ENSDNOG00000017834	EHD1	96	86.667	Dasypus_novemcinctus
ENSAMXG00000031892	-	100	83.146	ENSDORG00000030186	Ehd1	100	83.146	Dipodomys_ordii
ENSAMXG00000031892	-	99	66.105	FBgn0016693	Past1	99	66.105	Drosophila_melanogaster
ENSAMXG00000031892	-	99	75.422	ENSEBUG00000009968	EHD1	99	75.422	Eptatretus_burgeri
ENSAMXG00000031892	-	59	78.526	ENSEBUG00000010829	EHD1	91	78.526	Eptatretus_burgeri
ENSAMXG00000031892	-	100	83.521	ENSEASG00005018250	EHD1	100	83.521	Equus_asinus_asinus
ENSAMXG00000031892	-	100	83.521	ENSECAG00000011638	EHD1	100	83.521	Equus_caballus
ENSAMXG00000031892	-	99	89.184	ENSELUG00000016093	ehd1b	99	89.504	Esox_lucius
ENSAMXG00000031892	-	99	86.200	ENSELUG00000007973	-	99	86.200	Esox_lucius
ENSAMXG00000031892	-	100	83.521	ENSFCAG00000027734	EHD1	97	83.804	Felis_catus
ENSAMXG00000031892	-	100	82.959	ENSFDAG00000007697	EHD1	100	82.959	Fukomys_damarensis
ENSAMXG00000031892	-	98	87.023	ENSFHEG00000002690	ehd1a	98	87.023	Fundulus_heteroclitus
ENSAMXG00000031892	-	98	85.962	ENSGMOG00000012192	ehd1a	99	85.962	Gadus_morhua
ENSAMXG00000031892	-	99	86.095	ENSGAFG00000000730	ehd1a	98	86.233	Gambusia_affinis
ENSAMXG00000031892	-	98	85.496	ENSGACG00000017605	ehd1a	99	85.496	Gasterosteus_aculeatus
ENSAMXG00000031892	-	100	82.772	ENSGAGG00000001677	-	92	82.772	Gopherus_agassizii
ENSAMXG00000031892	-	98	86.069	ENSHBUG00000012087	ehd1a	99	86.069	Haplochromis_burtoni
ENSAMXG00000031892	-	100	83.146	ENSHGLG00000010254	EHD1	100	83.146	Heterocephalus_glaber_female
ENSAMXG00000031892	-	100	83.146	ENSHGLG00100014206	EHD1	100	83.146	Heterocephalus_glaber_male
ENSAMXG00000031892	-	99	86.286	ENSHCOG00000006825	ehd1a	99	86.286	Hippocampus_comes
ENSAMXG00000031892	-	100	85.714	ENSIPUG00000002819	ehd1a	99	85.714	Ictalurus_punctatus
ENSAMXG00000031892	-	100	83.459	ENSIPUG00000017390	EHD1	99	83.585	Ictalurus_punctatus
ENSAMXG00000031892	-	100	83.333	ENSSTOG00000009829	EHD1	100	83.333	Ictidomys_tridecemlineatus
ENSAMXG00000031892	-	100	83.146	ENSJJAG00000022299	Ehd1	100	83.146	Jaculus_jaculus
ENSAMXG00000031892	-	98	86.260	ENSKMAG00000004764	ehd1a	98	86.260	Kryptolebias_marmoratus
ENSAMXG00000031892	-	98	86.069	ENSLBEG00000004390	ehd1a	98	86.069	Labrus_bergylta
ENSAMXG00000031892	-	99	84.428	ENSLACG00000018148	EHD1	99	84.428	Latimeria_chalumnae
ENSAMXG00000031892	-	99	82.109	ENSLOCG00000000924	ehd1b	96	82.109	Lepisosteus_oculatus
ENSAMXG00000031892	-	100	80.712	ENSLAFG00000011643	EHD1	100	80.712	Loxodonta_africana
ENSAMXG00000031892	-	100	83.333	ENSMFAG00000032608	EHD1	100	83.333	Macaca_fascicularis
ENSAMXG00000031892	-	100	83.333	ENSMMUG00000003972	EHD1	97	83.616	Macaca_mulatta
ENSAMXG00000031892	-	100	83.333	ENSMNEG00000031673	EHD1	100	83.333	Macaca_nemestrina
ENSAMXG00000031892	-	100	83.333	ENSMLEG00000031992	EHD1	100	83.333	Mandrillus_leucophaeus
ENSAMXG00000031892	-	98	85.115	ENSMAMG00000021737	ehd1a	98	85.115	Mastacembelus_armatus
ENSAMXG00000031892	-	98	86.069	ENSMZEG00005004305	ehd1a	99	86.069	Maylandia_zebra
ENSAMXG00000031892	-	100	82.959	ENSMAUG00000013823	Ehd1	100	82.959	Mesocricetus_auratus
ENSAMXG00000031892	-	100	83.146	ENSMICG00000001239	EHD1	99	83.747	Microcebus_murinus
ENSAMXG00000031892	-	100	83.146	ENSMOCG00000015517	Ehd1	100	83.146	Microtus_ochrogaster
ENSAMXG00000031892	-	98	86.450	ENSMMOG00000003005	ehd1a	99	86.450	Mola_mola
ENSAMXG00000031892	-	98	85.496	ENSMALG00000012679	ehd1a	98	85.496	Monopterus_albus
ENSAMXG00000031892	-	100	82.959	MGP_CAROLIEiJ_G0022603	Ehd1	100	82.959	Mus_caroli
ENSAMXG00000031892	-	100	82.959	ENSMUSG00000024772	Ehd1	100	82.959	Mus_musculus
ENSAMXG00000031892	-	100	82.772	MGP_PahariEiJ_G0014097	Ehd1	100	82.772	Mus_pahari
ENSAMXG00000031892	-	100	82.959	MGP_SPRETEiJ_G0023514	Ehd1	100	82.959	Mus_spretus
ENSAMXG00000031892	-	100	83.333	ENSMPUG00000012497	EHD1	100	83.333	Mustela_putorius_furo
ENSAMXG00000031892	-	100	83.146	ENSNGAG00000020358	Ehd1	100	83.146	Nannospalax_galili
ENSAMXG00000031892	-	98	86.450	ENSNBRG00000002933	ehd1a	99	86.450	Neolamprologus_brichardi
ENSAMXG00000031892	-	100	83.333	ENSNLEG00000005375	EHD1	100	83.333	Nomascus_leucogenys
ENSAMXG00000031892	-	100	82.772	ENSOPRG00000011350	EHD1	100	82.772	Ochotona_princeps
ENSAMXG00000031892	-	100	83.333	ENSODEG00000014527	EHD1	100	83.333	Octodon_degus
ENSAMXG00000031892	-	61	87.654	ENSOCUG00000029532	EHD1	96	87.654	Oryctolagus_cuniculus
ENSAMXG00000031892	-	98	86.260	ENSORLG00000022561	ehd1a	98	86.260	Oryzias_latipes
ENSAMXG00000031892	-	98	86.069	ENSORLG00020018451	ehd1a	98	86.069	Oryzias_latipes_hni
ENSAMXG00000031892	-	98	86.069	ENSORLG00015017672	ehd1a	98	86.069	Oryzias_latipes_hsok
ENSAMXG00000031892	-	98	86.069	ENSOMEG00000019329	ehd1a	98	86.069	Oryzias_melastigma
ENSAMXG00000031892	-	100	83.146	ENSOGAG00000009351	EHD1	100	83.146	Otolemur_garnettii
ENSAMXG00000031892	-	92	84.221	ENSOARG00000010447	EHD1	99	84.536	Ovis_aries
ENSAMXG00000031892	-	100	83.333	ENSPPAG00000037178	EHD1	100	83.333	Pan_paniscus
ENSAMXG00000031892	-	100	81.273	ENSPPRG00000006031	EHD1	97	81.544	Panthera_pardus
ENSAMXG00000031892	-	100	83.333	ENSPTRG00000003851	EHD1	97	83.616	Pan_troglodytes
ENSAMXG00000031892	-	100	83.333	ENSPANG00000023358	EHD1	97	83.616	Papio_anubis
ENSAMXG00000031892	-	67	88.579	ENSPKIG00000020297	-	88	88.579	Paramormyrops_kingsleyae
ENSAMXG00000031892	-	99	89.163	ENSPKIG00000023165	-	99	89.163	Paramormyrops_kingsleyae
ENSAMXG00000031892	-	100	82.959	ENSPSIG00000005727	EHD1	100	82.959	Pelodiscus_sinensis
ENSAMXG00000031892	-	99	85.985	ENSPMGG00000017810	ehd1a	98	86.260	Periophthalmus_magnuspinnatus
ENSAMXG00000031892	-	100	83.146	ENSPEMG00000010917	Ehd1	100	83.146	Peromyscus_maniculatus_bairdii
ENSAMXG00000031892	-	73	69.923	ENSPCIG00000017053	-	96	69.923	Phascolarctos_cinereus
ENSAMXG00000031892	-	100	83.333	ENSPCIG00000014850	EHD1	100	83.333	Phascolarctos_cinereus
ENSAMXG00000031892	-	98	86.450	ENSPFOG00000010613	ehd1a	98	86.450	Poecilia_formosa
ENSAMXG00000031892	-	98	86.450	ENSPLAG00000023296	ehd1a	98	86.450	Poecilia_latipinna
ENSAMXG00000031892	-	98	86.260	ENSPMEG00000003397	ehd1a	98	86.260	Poecilia_mexicana
ENSAMXG00000031892	-	98	86.450	ENSPREG00000015893	ehd1a	98	86.450	Poecilia_reticulata
ENSAMXG00000031892	-	100	83.333	ENSPPYG00000003093	EHD1	100	83.333	Pongo_abelii
ENSAMXG00000031892	-	100	83.146	ENSPCOG00000010309	EHD1	99	83.427	Propithecus_coquereli
ENSAMXG00000031892	-	100	82.959	ENSPVAG00000007890	EHD1	100	82.959	Pteropus_vampyrus
ENSAMXG00000031892	-	98	86.069	ENSPNYG00000015448	ehd1a	99	86.069	Pundamilia_nyererei
ENSAMXG00000031892	-	100	84.398	ENSPNAG00000023091	ehd1a	99	84.398	Pygocentrus_nattereri
ENSAMXG00000031892	-	100	91.729	ENSPNAG00000007408	EHD1	100	91.729	Pygocentrus_nattereri
ENSAMXG00000031892	-	100	82.959	ENSRNOG00000043503	Ehd1	100	82.959	Rattus_norvegicus
ENSAMXG00000031892	-	100	83.333	ENSRBIG00000039111	EHD1	100	83.333	Rhinopithecus_bieti
ENSAMXG00000031892	-	100	83.333	ENSRROG00000026366	EHD1	100	83.333	Rhinopithecus_roxellana
ENSAMXG00000031892	-	100	83.333	ENSSBOG00000023399	EHD1	100	83.333	Saimiri_boliviensis_boliviensis
ENSAMXG00000031892	-	74	68.687	ENSSHAG00000007430	-	94	67.402	Sarcophilus_harrisii
ENSAMXG00000031892	-	92	89.959	ENSSFOG00015019587	EHD1	100	89.571	Scleropages_formosus
ENSAMXG00000031892	-	100	87.218	ENSSFOG00015006481	-	99	87.335	Scleropages_formosus
ENSAMXG00000031892	-	98	84.924	ENSSMAG00000018210	ehd1a	98	84.924	Scophthalmus_maximus
ENSAMXG00000031892	-	98	86.832	ENSSDUG00000016436	ehd1a	98	86.832	Seriola_dumerili
ENSAMXG00000031892	-	98	86.832	ENSSLDG00000015328	ehd1a	98	86.832	Seriola_lalandi_dorsalis
ENSAMXG00000031892	-	98	86.450	ENSSPAG00000008682	ehd1a	98	86.450	Stegastes_partitus
ENSAMXG00000031892	-	99	83.616	ENSSSCG00000013017	EHD1	99	83.616	Sus_scrofa
ENSAMXG00000031892	-	98	85.878	ENSTRUG00000025890	ehd1a	98	85.878	Takifugu_rubripes
ENSAMXG00000031892	-	98	85.769	ENSTNIG00000016792	ehd1a	97	85.769	Tetraodon_nigroviridis
ENSAMXG00000031892	-	78	75.000	ENSTBEG00000007057	EHD1	100	75.000	Tupaia_belangeri
ENSAMXG00000031892	-	100	83.146	ENSTTRG00000008887	EHD1	100	83.146	Tursiops_truncatus
ENSAMXG00000031892	-	100	83.146	ENSUAMG00000012071	EHD1	100	83.146	Ursus_americanus
ENSAMXG00000031892	-	99	81.767	ENSUMAG00000007890	EHD1	99	81.905	Ursus_maritimus
ENSAMXG00000031892	-	100	83.146	ENSVVUG00000027552	EHD1	84	83.427	Vulpes_vulpes
ENSAMXG00000031892	-	100	82.210	ENSXETG00000001638	ehd1	100	82.210	Xenopus_tropicalis
ENSAMXG00000031892	-	99	85.985	ENSXCOG00000001781	ehd1a	99	85.849	Xiphophorus_couchianus
ENSAMXG00000031892	-	99	86.095	ENSXMAG00000005301	ehd1a	98	86.233	Xiphophorus_maculatus