EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000032036 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 4425 bases
Position: chrAPWO02002305.1:135033-139457
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000035969	RVT_1	PF00078.27	1.6e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000048385	-	2253	-	ENSAMXP00000035969	750 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000032036's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000032036's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000032036	-	55	46.489	ENSAMXG00000035718	-	73	47.716
ENSAMXG00000032036	-	55	44.019	ENSAMXG00000038901	-	87	44.203

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000032036	-	50	46.174	ENSACIG00000020849	-	92	46.174	Amphilophus_citrinellus
ENSAMXG00000032036	-	67	43.227	ENSACIG00000020856	-	99	43.227	Amphilophus_citrinellus
ENSAMXG00000032036	-	50	46.579	ENSATEG00000019721	-	98	46.579	Anabas_testudineus
ENSAMXG00000032036	-	55	32.273	ENSACAG00000028249	-	52	32.287	Anolis_carolinensis
ENSAMXG00000032036	-	80	32.091	ENSACLG00000015899	-	83	31.884	Astatotilapia_calliptera
ENSAMXG00000032036	-	52	34.010	ENSCVAG00000007707	-	59	34.010	Cyprinodon_variegatus
ENSAMXG00000032036	-	57	39.161	ENSHBUG00000003796	-	97	38.288	Haplochromis_burtoni
ENSAMXG00000032036	-	55	32.407	ENSHBUG00000020853	-	50	33.777	Haplochromis_burtoni
ENSAMXG00000032036	-	88	30.259	ENSKMAG00000022168	-	54	30.259	Kryptolebias_marmoratus
ENSAMXG00000032036	-	50	30.769	ENSKMAG00000014393	-	79	32.344	Kryptolebias_marmoratus
ENSAMXG00000032036	-	90	30.504	ENSLACG00000022265	-	89	30.580	Latimeria_chalumnae
ENSAMXG00000032036	-	88	30.233	ENSLACG00000002632	-	58	30.339	Latimeria_chalumnae
ENSAMXG00000032036	-	59	30.687	ENSMZEG00005011529	-	71	32.461	Maylandia_zebra
ENSAMXG00000032036	-	52	30.303	ENSMZEG00005025877	-	81	32.370	Maylandia_zebra
ENSAMXG00000032036	-	58	31.004	ENSMZEG00005017030	-	72	32.461	Maylandia_zebra
ENSAMXG00000032036	-	52	30.303	ENSMZEG00005008304	-	81	32.370	Maylandia_zebra
ENSAMXG00000032036	-	52	48.469	ENSNBRG00000022130	-	94	48.469	Neolamprologus_brichardi
ENSAMXG00000032036	-	51	44.531	ENSNBRG00000001934	-	82	44.531	Neolamprologus_brichardi
ENSAMXG00000032036	-	56	31.422	ENSORLG00020014626	-	71	33.159	Oryzias_latipes_hni
ENSAMXG00000032036	-	52	30.467	ENSPNAG00000024749	-	75	33.022	Pygocentrus_nattereri
ENSAMXG00000032036	-	50	34.161	ENSXETG00000034134	-	52	34.161	Xenopus_tropicalis
ENSAMXG00000032036	-	64	32.450	ENSXETG00000032308	-	58	32.450	Xenopus_tropicalis