EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000032121 (Gene tree)
Gene ID: -
Gene Symbol: rbm4.2
Alias: rbm4l|wu:fc25a01
Full Name: RNA binding motif protein 4.2
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 1538 bases
Position: chr16:39008381-39009918
Accession: ZDB-GENE-030131-3019
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000040085	RRM_1	PF00076.22	8.2e-35	1	2
ENSAMXP00000040085	RRM_1	PF00076.22	8.2e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000057438	-	480	-	ENSAMXP00000040085	159 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000032121's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000032121's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000032121	rbm4.2	89	72.535	ENSAMXG00000036611	rbm4.1	52	72.535
ENSAMXG00000032121	rbm4.2	87	51.799	ENSAMXG00000040224	rbm4.3	63	51.799

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000032121	rbm4.2	88	59.286	ENSAPOG00000012375	-	97	59.286	Acanthochromis_polyacanthus
ENSAMXG00000032121	rbm4.2	88	59.286	ENSACIG00000016472	-	87	59.286	Amphilophus_citrinellus
ENSAMXG00000032121	rbm4.2	88	60.000	ENSAOCG00000010907	-	97	60.000	Amphiprion_ocellaris
ENSAMXG00000032121	rbm4.2	88	60.000	ENSAPEG00000009476	-	87	60.000	Amphiprion_percula
ENSAMXG00000032121	rbm4.2	89	60.563	ENSATEG00000001912	-	93	60.563	Anabas_testudineus
ENSAMXG00000032121	rbm4.2	89	58.451	ENSACLG00000007740	-	62	58.451	Astatotilapia_calliptera
ENSAMXG00000032121	rbm4.2	84	45.113	ENSCPBG00000023666	-	92	45.113	Chrysemys_picta_bellii
ENSAMXG00000032121	rbm4.2	87	67.626	ENSCSEG00000007739	-	99	67.626	Cynoglossus_semilaevis
ENSAMXG00000032121	rbm4.2	92	68.707	ENSDARG00000036386	rbm4.1	84	68.707	Danio_rerio
ENSAMXG00000032121	rbm4.2	87	54.930	ENSEBUG00000008142	-	50	54.930	Eptatretus_burgeri
ENSAMXG00000032121	rbm4.2	86	54.286	ENSEBUG00000007174	-	88	54.286	Eptatretus_burgeri
ENSAMXG00000032121	rbm4.2	96	54.605	ENSFHEG00000003483	-	100	54.605	Fundulus_heteroclitus
ENSAMXG00000032121	rbm4.2	95	54.967	ENSGAFG00000019301	-	99	54.967	Gambusia_affinis
ENSAMXG00000032121	rbm4.2	84	46.617	ENSGAGG00000014558	-	92	46.617	Gopherus_agassizii
ENSAMXG00000032121	rbm4.2	91	57.931	ENSHBUG00000011624	-	94	57.931	Haplochromis_burtoni
ENSAMXG00000032121	rbm4.2	88	55.000	ENSHCOG00000011413	-	82	55.000	Hippocampus_comes
ENSAMXG00000032121	rbm4.2	89	54.930	ENSLBEG00000019756	-	86	55.797	Labrus_bergylta
ENSAMXG00000032121	rbm4.2	87	46.043	ENSLACG00000006343	zgc:77262	52	46.043	Latimeria_chalumnae
ENSAMXG00000032121	rbm4.2	87	69.565	ENSLOCG00000002772	rbm4.1	93	69.565	Lepisosteus_oculatus
ENSAMXG00000032121	rbm4.2	88	55.714	ENSMZEG00005028161	-	77	55.714	Maylandia_zebra
ENSAMXG00000032121	rbm4.2	87	59.124	ENSMZEG00005028160	-	93	59.124	Maylandia_zebra
ENSAMXG00000032121	rbm4.2	87	56.835	ENSMZEG00005009210	-	77	56.835	Maylandia_zebra
ENSAMXG00000032121	rbm4.2	87	56.522	ENSMMOG00000020484	-	86	56.522	Mola_mola
ENSAMXG00000032121	rbm4.2	91	57.241	ENSNBRG00000017763	-	94	57.241	Neolamprologus_brichardi
ENSAMXG00000032121	rbm4.2	89	65.493	ENSPKIG00000020805	rbm4.1	100	66.667	Paramormyrops_kingsleyae
ENSAMXG00000032121	rbm4.2	89	70.922	ENSPMGG00000004331	rbm4.1	94	70.922	Periophthalmus_magnuspinnatus
ENSAMXG00000032121	rbm4.2	86	53.285	ENSPMAG00000003433	rbm4.2	86	53.285	Petromyzon_marinus
ENSAMXG00000032121	rbm4.2	87	56.522	ENSPLAG00000018569	-	88	56.522	Poecilia_latipinna
ENSAMXG00000032121	rbm4.2	87	56.522	ENSPMEG00000006278	-	88	56.522	Poecilia_mexicana
ENSAMXG00000032121	rbm4.2	88	55.714	ENSPREG00000003764	-	52	55.714	Poecilia_reticulata
ENSAMXG00000032121	rbm4.2	91	57.931	ENSPNYG00000004649	-	94	57.931	Pundamilia_nyererei
ENSAMXG00000032121	rbm4.2	87	50.000	ENSSFOG00015018567	zgc:77262	89	50.000	Scleropages_formosus
ENSAMXG00000032121	rbm4.2	88	57.857	ENSSMAG00000007575	-	90	57.857	Scophthalmus_maximus
ENSAMXG00000032121	rbm4.2	87	59.712	ENSXETG00000026649	rbm4b	64	59.712	Xenopus_tropicalis
ENSAMXG00000032121	rbm4.2	99	52.866	ENSXCOG00000003730	-	98	52.866	Xiphophorus_couchianus
ENSAMXG00000032121	rbm4.2	88	57.143	ENSXMAG00000008059	-	51	57.143	Xiphophorus_maculatus